Astyanax mexicanus (Mexican tetra): 103022127
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Entry
103022127 CDS
T05042
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103022127 (chrna6)
04082 Neuroactive ligand signaling
103022127 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103022127 (chrna6)
Ion channels [BR:
amex04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
103022127 (chrna6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Pyr4-TMTC
Motif
Other DBs
NCBI-GeneID:
103022127
NCBI-ProteinID:
XP_022537479
Ensembl:
ENSAMXG00000030698
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All DBs
Position
25:7579587..7624400
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AA seq
522 aa
AA seq
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MPRAGRRTFFLFLLLLFLITLMARECFSSKGEDRLFRRLFRRYNQFIRPVENVSDPVTVE
FEVSISQLVKVDEVNQIMETNLWLRHIWNDYKLKWIPAEFDGIEYIRVPSNKIWRPDIVL
YNNAVGDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYD
KAKIDLVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLF
YTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPL
IGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPGWVRTVFLRALPRIMLMRRPIDQS
ESSTKGGGHESGGSSGIGSSGGGGRGGEGKKRKNSSSQQGAMNCLEFGEGKGSGEGKKGG
CPCHPAKEGPEVDCGKVSRQLSPQAINTVVAFSVVSPEIKQAIESVKYIAENMRSRNKAK
EVEDDWKYVAMVIDRIFLWVFVLVCVLGTVGLFFQPLIGFLS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgcggggagacgcactttcttcctcttcctcctcctgctcttcctcatcact
ctcatggcgcgagagtgtttctcgtctaaaggcgaggacaggctgttccggcgcctgttc
aggaggtataatcagttcatccggccggtggagaacgtgtccgatccggtgacggtggag
ttcgaggtttctatctctcagctcgtcaaagtggatgaagtcaatcagatcatggagacc
aacctctggttgagacatatatggaacgactacaagctgaaatggataccagcagaattt
gatggtatcgagtacatcagggttccgtccaataagatctggaggccagacattgtgctc
tacaacaatgctgtaggtgacttcttggtggaagacaaaaccaaagctttgcttaagttt
gacggcaccatcacgtgggtccctccagccatcttcaaatcctcctgcccaatggatatc
acctacttcccattcgactaccaaaactgttccatgaagtttgggtcatggacctacgac
aaggccaagatcgatctggtcctgattggctctaaggtcaacctcaaagacttttgggag
agcggagagtgggagatcattgacgcacctggatacaagcatgacatcaagtacaactgc
tgcgaggagatatacccagacatcacctatagcttctacatccgtcgccttcccctgttc
tacaccatcaatctcattatcccgtgcctcctcatttccttcttaacagtcctggttttc
taccttccatcagactgtggggagaaggttacactctgcatctcagtccttctgtccctt
accgtgttcctgctggtcatcacggagaccattccgtctacctccttggtaatccctctg
attggcgagtacctgctcttcaccatgatattcgttacactctcaatcgtcatcactgtc
ttcgtactcaacgttcactaccgaacgcccactacccacaccatgcccgggtgggtccgc
accgtcttcctccgggccttgcctcgcatcatgctgatgcggcgcccaatcgatcaatca
gaatcttcaactaagggcggcggacacgaaagtgggggctcgtccgggatcggcagcagt
ggaggaggtggtagaggaggggaagggaagaagaggaagaacagcagctctcagcagggg
gctatgaactgtttggagtttggagagggcaagggttcgggcgaggggaagaaaggaggt
tgcccatgtcatccagcgaaagaggggcccgaagtggattgtggaaaagtgagtcgccag
ttgagcccacaagccataaacacggttgtggctttttcagtggtgtctccagagatcaag
caggccattgaaagtgtcaagtacatcgcggagaacatgaggagccgcaacaaggctaaa
gaggtggaagatgactggaagtacgttgccatggtgattgaccggatcttcctctgggtc
ttcgtgctggtctgcgtgcttggaacggtgggcctcttcttccagcctcttattggtttc
ctctcataa
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integrated database retrieval system
