Astyanax mexicanus (Mexican tetra): 103022212 Help Entry 103022212         CDS       T05042                                  Symbol cdh23 Name (RefSeq) cadherin-23 isoform X1   KO K06813   cadherin 23 Organism amex  Astyanax mexicanus (Mexican tetra) Brite KEGG Orthology (KO) [BR:amex00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:amex03037]     103022212 (cdh23)    04515 Cell adhesion molecules [BR:amex04515]     103022212 (cdh23) Cilium and associated proteins [BR:amex03037]  Primary cilia and associated proteins   USH complex and associated proteins    103022212 (cdh23) Cell adhesion molecules [BR:amex04515]  Cadherins   Major cadherins    103022212 (cdh23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Fibulin_C PCDH15_12th DUF4307 Motif Other DBs NCBI-GeneID:  103022212 NCBI-ProteinID:  XP_049336961 LinkDB All DBs Position 7:127691..405478 Genome browser AA seq 1906 aa AA seqDB search MSDVSVNVPEDTPMGRRVAVVLARDRDAGKNGLVNFTLVAGNMQDVFAIQTVNNTYGDVF VNAPLDREAIDRYLLKVRATDNGSPPRFTDQSLTINIVDVNDNAPVVQSPRGYNVSISEN VGGGTAVLRVVATDRDIGPNGQLSYYITSGNQDLTFRMDRVTGEIVTRPSPPDRERQQQY TLTVTVEDEGNPPLSATTTVWVYVIDENDNAPVFAAKEYVTVLTEGPETIGSTIATVSAT DPDEGLNGTVRYAITQGNLGQTFNISPTSGRIVVMKELDYEVSSGRYTLVITATDQCPIL QLRLTSSATVVVNVIDVNDVTPQFPRDFEGPFEITEGQPGPRVCTVKATDQDSDLNGKVE YSITAGDLNNEFIVSPVEGELRVKRDVELDRETTVYYNITITARDLGTPPRSSTVVVGVQ VLDINDNDPILLNLPMNTSVSEGASIQTSIARVQARDSDSGRNALLTFNITAGNPDGAFY INETSGVVQVNRPLDRERVAEYLLTITVKDNPENPRIARRDSDVLVVTILDINDNRPIFT SSSYRGEISENSPTGTTVTILNGPVLAVDRDVGVNAVVKYGLLGSRVDLFTINSTTAVVS VREGGVLDREAFSDPRVELFLVGEDIGGLNSSVPLTITILDRNDNPPVFNPSSFTVRLPE NSPTGVVVTQLSATDADAGSNGWLQYRLESGAQDRFVVDPLSGAVLVGNATLDREERPSY RLVVAASDRGTPPLSGTATLTVVLDDLNDSRPRFLQPVQTISVNESTPPGVVVATLAAED PDLRPRLEYYIISVEAKDDGNNPVSGLQESFGIDFHTGAVFVRNPLNRELVATFEIIVSV HDNASDVIDMSVSVPNARLTIAVLDVNDNAPRFRPFGVTNFSESILEGAQPGTTLLSVSA VDPDKGPNGQIFYELLHLPRGDYVRLEDPSTGKIIANRTVDYEQVQWLNFTVRTQDRGSP PRFSELPVYLRIVDVNDNNPVFLQPSYQRQVLEDVALGTIIVRVSATDADSGLFSVIEYS LVDGEGKFGITPSTGDIYILSRLDRETKDRYTLTAIARDNPGGSPNNRRENSVQVLVTVL DVNDFRPRFSSSVFSNNVFENEPSGTSVITLTATDLDEGENALLTYSLQGPGADAFSLDP DTGLIRSLRLLHSFERFNLTVIATDHGRPPLWGTASLQITVIDVNDNRPVFVRPANGTIM HILEEQPPGLVVYEVFATDEDEGVNGEVRYSFLQTGAGNRDWENFHIDALTGVITTAVKL DREKQPLYSLIVVAYDLGQPVPYETTQPLQVALSDLDDNEPVFLKPPRGGILFQSLNVPE HSSPGTVVGNVTGAVDADEGSNAIVYYFIAGGDTDGNFALSVSGVLRVKKDLDREEIPMY SIIVKASSNRNWSPPRGQRSKTNRALDPSRDPTLQEVRIYLEDINDQPPRFTKMEYTAGV AADAKVGSELIQVQAVDNDIGNNSLILYHILSILYIKLLSNDSEDIGNVYIIGETDGIIR TFDLFTAYDPGYFVVEVLARDLAGHSDVAIVGIYILRDDQRVKLIINEIPERVWLFQEEL INLLSNITGAIVNMDDVQFHVDKKGRVNFAQTDVLIHVVNKQTNRILDVERVIQMIDENK EQLRNLFRNYNVLDVQPAVSGRAPDDLTTLQMAIIILAVLLFLAAMLFIFMNWYYRTVHK RKLKAIVAGSTGNQGLMDILDMPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPEN LSDITDLWNSPARTHGTFGREPHANKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKLVQS DLDEDDDERLGVGGRGTLRFKHKHPVELRGPDGVHVVHGSTGTLLTSDLNSLPEDDQRAL ARSLEALHADGGLYAERNARTESAKSTPMHRNKSTLSESPLEITEL NT seq 5721 nt NT seq  +upstreamnt  +downstreamnt atgtcggacgtgtcggtgaacgttcctgaggacacgcccatgggccggagagtggctgtg gtgctggcgagggacagagacgccgggaagaatggactggtgaactttacattggtggcg ggaaacatgcaagatgtgtttgcaatccaaactgtgaacaacacgtacggagacgtgttc gtaaacgcccccctcgatcgagaagcgatagaccgctacctgctcaaggtacgggctact gataacggctctcctcctcgattcacggaccaatcactgaccattaacatcgtggatgtg aacgacaacgctcccgtagtgcagagcccccgcggatacaacgtcagcatcagtgagaat gtaggtggtggtacagcagtcctgcgggtggtcgctactgaccgagacatcggacccaac ggtcagttatcctattacatcaccagtggcaaccaggaccttaccttccgcatggaccga gtgactggagagatagtgaccagaccttcaccccccgacagagagcggcagcagcagtac accctcaccgtcacggtggaggacgagggaaacccaccgctctcggccaccaccacggtg tgggtgtacgtaatcgatgagaacgataacgccccggtttttgctgcgaaggagtacgtg actgttctgactgaaggtccggagaccatcggttccaccatcgccacagtttcagctacc gacccagacgaggggctgaacggcaccgtgcgctacgccatcacccagggaaacctgggt caaactttcaacatcagccccacttcgggccggatcgtggtgatgaaagagctggactat gaggtcagcagtggacgctacacgctggtcatcactgcaactgaccaatgccccatatta caactcagactgacatccagtgccaccgttgtggtgaatgtgatcgatgtgaatgacgtg accccccagttcccccgggactttgagggcccatttgagatcacagagggtcagcccgga ccccgagtctgcactgttaaagctactgaccaggactcggacctgaatggaaaagtggaa tacagcatcacagctggagacctgaacaacgagttcatcgtgtctcctgtggagggggag ctgagggtgaagagagatgttgagctggatcgagagacgacagtttattataacatcacc attacagccagagacctgggaacaccgccacgcagcagcacggtggtcgtgggggttcag gttttggacattaatgataatgatcccattctgctgaacttacccatgaacaccagcgtc agcgagggggcgtctatacagacctccatcgcccgcgtgcaggccagagactcagacagc ggccgcaacgccctgctcaccttcaacatcactgcaggaaacccagacggagcgttctac atcaacgagacttcaggtgtggttcaggtgaacaggccgttagacagagagcgagtggct gaatacctgctgaccatcacagtcaaagacaaccccgagaacccccgcatcgcccgcagg gactcagatgtgctggtggtcaccattctggacattaatgataacaggcccatcttcaca tcctccagctacagaggagagatcagtgagaactcccccacaggaaccacagtgacgata ctgaacgggccggttctggctgtggacagagatgttggggttaatgctgtggtgaagtac ggcctgctgggatccagagtggacctcttcaccatcaactctactacagccgtggtgtca gtgcgtgagggtggagtgttggacagagaagcgttctctgacccgcgggtggagctgttt ctggttggggaggacatagggggtctgaacagcagcgttcccctcaccatcaccatcctg gacagaaacgacaatcctccagtgtttaatccatccagcttcaccgtacgccttcctgaa aacagccccacaggtgtggttgtgactcagctctcagctacggatgcggacgccggctct aacggttggctgcagtaccgattggagagcggcgctcaggatcggtttgtggtggaccct ctctctggggcggttctggtcggaaacgcgacgctggaccgcgaggagcgcccgtcctat cggctggtcgtcgcggcatcagaccggggcacgcccccgctctcgggcacggccacgctc accgtggtgctggacgacttgaacgactctcggccgcgcttcctgcagccggtccagact atcagcgtgaacgagtccacgccgcccggggtggtggtggcaacccttgccgccgaggac cctgacctccgaccccgtctggagtattacatcatctctgtggaagccaaagacgacggg aataacccggtcagcggcctgcaggagtccttcgggatcgactttcacacaggtgctgta tttgttcgaaaccctttgaacagagagctggttgctacttttgagatcatagtgtcagtt catgataatgccagtgatgtcatcgacatgtccgtcagtgtgcccaatgccaggctgacc atcgctgttctggacgtgaacgataacgcgccgcgctttcggccgtttggcgtcactaat ttctctgagagcattctggagggagctcagccgggcaccacgctactctcagtctccgca gtggatccagacaaaggccctaatggacagatattctacgagcttctgcatttgcccaga ggagactacgtgcgactcgaggacccctctacaggtaagattatagccaatcggacggtg gattacgagcaggttcagtggctgaacttcaccgtgcgcactcaggatcggggcagcccg ccaaggttctccgagcttcctgtttacctgcgtattgtcgacgtcaacgacaacaacccc gtcttcctacagccctcgtatcagagacaagtattggaggatgtggctctgggtaccatc atagtgcgagtgagcgctacagacgctgactcaggactcttctcggttattgagtactca ttggtggatggagaggggaagtttggaatcaccccctctacgggggatatctacattctg tctcggctggaccgagagactaaagaccgctacaccctcaccgccatcgcacgggacaac cccgggggcagccccaacaaccggcgggaaaattcagttcaggttttggtgacggttctg gatgtgaatgatttccgtccgcggttcagctccagcgttttcagcaacaatgtgtttgag aacgagccgagcgggacgtctgtgataacactgaccgctactgatctggacgagggggaa aacgccctgctcacgtacagcctgcaggggcccggagcagatgcgttctctctggacccg gacactggtctgatccgttctctgcgtctgctgcacagttttgagaggtttaatctgact gtaattgccacagaccacggtagacccccgctctggggcactgccagtctccagatcacc gtcattgacgtcaatgacaacagacctgtctttgtgagaccggccaatggaaccatcatg catatccttgaagagcagccccctgggttagtggtgtacgaggtgtttgcgacggatgag gatgaaggagtgaacggggaggtgcgctacagcttcttgcagactggagccggaaacaga gactgggaaaacttccacatcgacgctctgactggcgtcatcaccactgccgtcaaactg gaccgagagaagcagccgctgtacagcctgatcgtggtggcgtatgatctaggccagccg gttccttacgagaccacccagcctctgcaggtagctctgtctgatctagatgacaacgag ccggtcttcctcaaacccccgagaggtggaattctattccagtctctgaatgttccagag cactcctctcctggcactgtggtggggaacgttacaggggcagtggatgcagatgaaggt tccaacgctattgtctactacttcatcgcagggggagacactgatgggaactttgctctg agtgtgtctggagtgctcagagtgaagaaggatctggaccgtgaggaaattcccatgtat tccatcatcgttaaagcctccagcaatcgcaactggtctccaccgaggggtcagaggtcg aaaacaaaccgcgcgctcgatcccagccgtgatccaaccctgcaggaggtccgcatctac ctggaggacattaatgaccagcccccaagattcacaaagatggagtacactgcaggcgtg gctgcagatgctaaagtgggctctgaactgatccaggttcaggccgtcgacaacgatatc ggaaacaacagtctgattctgtatcacattctgtccatcctctacataaaactactatcc aacgactcggaggacatcggcaatgtttatataattggtgaaacggatggtataatccga acgtttgacctgttcacggcttatgacccgggctattttgtggtggaggtgctggcgagg gacctggcgggacacagcgacgtggcgatagtgggaatctacatcctgcgggacgatcag agggtgaagctcatcataaatgagataccggagcgagtctggctctttcaggaggagcta atcaacctgctctcaaacatcaccggagccattgtcaacatggacgatgtacagttccat gtggataaaaagggtagagtaaactttgcacaaactgatgttctgattcacgtggtcaac aagcaaaccaaccgcatcctggatgtggagagggtgattcagatgattgatgagaataag gaacagctgagaaatctgttcaggaactataacgtcctggatgtccagcctgcagtgagt ggacgagcacctgatgatctcactaccctgcagatggctataataatcttggctgtattg ctgttcctggcagccatgctcttcattttcatgaactggtattatcgaacagtacacaag aggaagctgaaggccatcgtcgctggctccacaggcaaccagggactgatggacatcctg gacatgcccaacaccaacaagtattcgtttgaaggagccaatcctgtgtggttggatccg ttctgcagaaacctggagctggccgcccaggccgaacatgaagacgacttacctgagaac ctgagtgacatcactgatttgtggaacagccctgctcgcactcacggcacgtttgggcgt gagcctcacgctaataagccggaggatgaccgctacctcagagctgctattcaggagtac gacaacatcgctaaactgggtcagattatgcgagaaggacccattaagctggtccagagc gacctggacgaggatgatgacgagcggctcggtgtgggaggaagaggaacgcttcgcttt aagcacaagcaccctgtggagctgcgcggtccagacggtgttcacgtggtgcacggcagc acaggcaccctgctgacctcagacctcaacagcctgccagaggatgaccagcgggccctg gcccgttctctggaggcactgcatgctgacggcggactgtacgccgagcgcaacgcacgc acagagtcggccaagtccacacccatgcaccgcaacaagagcacgctatcggaaagccca ctggagataacggagttatga

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