Astyanax mexicanus (Mexican tetra): 103022242
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Entry
103022242 CDS
T05042
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103022242 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103022242 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
amex04091
]
103022242 (lman1)
Membrane trafficking [BR:
amex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
103022242 (lman1)
Lectins [BR:
amex04091
]
L-type lectins
103022242 (lman1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
UvrD_C
GCN5L1
Motif
Other DBs
NCBI-GeneID:
103022242
NCBI-ProteinID:
XP_022532267
Ensembl:
ENSAMXG00000040567
LinkDB
All DBs
Position
17:complement(43253996..43275704)
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AA seq
514 aa
AA seq
DB search
MAARALVAAVAVLVVCECVHAEQQEAAGGAGDSASTGGRVGGSGGGGDAPHRRFEYKYSF
KGPHLSRDGSIPFWVHTGSAIPSADQIRITPSLRSQKGSVWTKSPVNFDNWEAEVAFRVS
GRGRTGADGLAIWFTTGQGLEGPVYGAADQWNGVGVFFDSFDNDGKKNNPAVIVVGNNGK
LVYDHQNDGSTQALGTCLRDFRNKPYPVRAKITYYRKTLTVLINNGFTPEKEDYEFCTRV
ENMIIPPTGYFGISAATGGLADDHDVLSFLVFRLTEPGKEVPPPEQEIPKEEQDKYQEEF
QNFQQELDKKKEEFQKEHPDVQGQPLEDLYESVSDRELRQVFEGQNRIHLEIKQLNRQLA
MILDEQRRYVSVITEEISKRGSQSGQVPSQDMGTVITTQQEVLRNLNDLRNTFSASVQQL
AGGQQGHAGGLGSYETVQHFNDIKEHLHVVKRNIEHIIQKNAGPAEKTQCPELPPLPACL
TTSHFVIFVVIQTLLFFGYVLYKNQQEAAAKKFF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcgcgctggtagcggcggtagcggtgttggtggtgtgcgagtgtgtgcac
gcggagcagcaggaggcagccggcggtgccggtgacagtgccagtaccggtggcagggtc
ggtggcagcggcggtggcggggacgcgcctcaccggcgcttcgagtacaaatacagcttc
aagggtccccatctgagccgggacgggagcatccccttctgggttcacacggggagtgcc
attccgagtgcagatcagatccggatcaccccctccctgcgcagccagaaaggttcagta
tggaccaaatctccagtcaactttgacaactgggaggcggaggtggcgttccgcgtgtct
ggccgaggacggacaggtgcagatggactggctatatggttcactactgggcagggcctt
gaaggtccagtatatggtgctgctgaccagtggaatggtgtgggagtattctttgactcc
tttgacaatgatggaaagaaaaataacccagcggtcattgtggtggggaacaatggaaaa
cttgtttatgatcatcagaatgatggatcaacgcaggctctgggtacatgccttagagac
ttccggaataagccttatcccgtccgtgccaaaatcacatactacagaaaaacattaacg
gttctgatcaataatggtttcacccccgagaaggaggattatgagttctgtaccagagtg
gaaaacatgatcattccacccactggatactttggcatctctgctgctacaggaggactg
gcagatgaccatgatgtcttatccttcctggtgttcaggttaactgagcctggaaaggaa
gtgcccccacctgaacaagagattcctaaagaggagcaggacaagtaccaggaggaattt
cagaatttccaacaagagctggacaaaaagaaagaggagttccagaaggagcaccctgac
gtccagggccagcccctggaggacctgtacgagagcgtgagcgaccgcgagctccgtcag
gtgtttgaaggacagaaccggatccacctggagatcaaacagctgaaccggcagctggcc
atgatcctggatgaacagcggcgctacgtctccgtcatcacggaggagatctctaaacga
ggatctcagtcaggacaggttccgagtcaggacatgggcactgtaatcaccacccagcag
gaggtcctgcgtaacctgaatgacttaagaaacacattctcagcctcagtacagcagctg
gcagggggacagcagggacacgctggaggtttgggctcatacgagactgtgcaacacttc
aacgacattaaagaacatctgcacgtcgtcaagagaaatattgagcacatcatccaaaaa
aatgcgggtccagctgagaagacgcaatgtcctgaactgcccccgttaccagcctgcctc
accacgtcacactttgtcattttcgtggtcattcagacgctcctgttttttggatatgtc
ctgtacaaaaatcaacaggaagcagcagctaagaaattcttttga
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