Astyanax mexicanus (Mexican tetra): 103022245
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Entry
103022245 CDS
T05042
Symbol
fhod1
Name
(RefSeq) FH1/FH2 domain-containing protein 1 isoform X1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103022245 (fhod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103022245 (fhod1)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
103022245 (fhod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Drf_FH3
Motif
Other DBs
NCBI-GeneID:
103022245
NCBI-ProteinID:
XP_049327090
Ensembl:
ENSAMXG00000005952
LinkDB
All DBs
Position
23:8189361..8281481
Genome browser
AA seq
1409 aa
AA seq
DB search
MAVLTCRVQYLEDTDPFVCTNFPEPRRPLQYELKENLPLNEQIAGVHKLLQAPLKLEECA
LQVSPNGNYLDLDSSLTEQRDELEQFYEDIAIGKKPILILRTQLSVRVHSILEKLYNSQG
PELRRSLFSLKQLFQDDKDLVPEFVNSDGLTCFIKVGAEADHNYQNYILRALSQIMLFVD
GMNGVINHNETVQWLYTLTGSMSRLVVKTALKLLIVFVEYTESNGPLLIQAVNTVDVKRG
VKSWSYLTDMLEEKNGSDTELLVYTMTLINKTLAALPDQDSFYDVTDSLEQQGMERIMQK
HMSSRGIDPDLKQQFTIYENALKYEDGEMDEACPHIRKERRKVASSEQEGRRSRRASAQS
FPDVPLSSSLPASSSSSVSSHSPTTGLSRATSPLPSDRPSSPIPTVSVSPEPFSPSSSVS
ESPSQSSSPVTSPVVSNGTAANSSDLEQRLGRSFMSQYMAHMGISRRRLKKAGSITEEPS
TPSKSTSPTAAPPQEKQTEPEQQNHTEGKGGFNSEDCSVNKDRPVLRNYADTFLRTLAAT
HWEKRKPQPVKQQVSLSESVSPDPDVYSQSTETEQPASEETGHSSGQEPQSPGGDSSRRS
PSPSRLEQPGEPHTTQQNEPGDSVQRQGSVAERHSTLSNDRKFMLDMLYAKSSTSSGTGS
NSGPLKSPSMDESLAESGGVEDASISSLAGRLSSLRSHSSQSSEDASRRAELEGLGGSAQ
AARARLAEEQKHRRVRPQYSIDAETHSRSLEKTMMTPLSRDNQEAWENLQPSSKALRIKD
LDFSDLLEEEDIDVLDIDTFDTGMVNGIPPPPPPGGGLGCLPPPPPPPPPPGLAGLSPPP
PPPPPPSSARLSGPPPPPPPPGMPPPPPSLAADPAFIKKRKTVKLFWKELKQPDSPRKCK
FGRGTVWASLDKVSVDTDKLEHLFESKAKDLPVAKKGAEVKRAEIHVLDSKRSNAINIGM
TVLPAVHIIKTAILNFDEFAISKEGIEKILTMTPTEEEKQKIQEAQLASPDVPLGTAEQF
LLTLSSISGLTARLQLWAFKLNYESLEKEIAEPLFDLKLGMEQLAKNKTFKRILATLLAI
GNFLNSSSAKGFELSYLEKVIEVKDTVHRQSLLHHCCNFVVENYPDTSDVYSEISAITRS
AKVDFEQLSDNLVQLERKCKTSWDNLKVMAKHETKLQLKNKMTEFLKDCTERIIILKVVH
RRIINRFHSFLLYLGQPSYSVRDTKITQFCKIISEFSLEYRTTRERVLTQKRKRAAHRER
TKTRGKLITETEKFSGAVPSISQDSPSPVSMTTEAEPAQEEHENMKNLLIANDDRSKLRR
SRAVRSMGRVSPSPSMVKEDGVNLPDDATDEIMDRLVKSVTQNPSERASSPKERKRSRLN
RKSLRRTLKSGLSVDVVQALGLNKATEKV
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgttaacgtgtcgcgtccagtacctggaggataccgacccgttcgtgtgtacg
aacttccccgagcccaggagacctctccagtacgagctgaaggagaacctgccgctgaac
gagcagatagctggagttcataagctgctgcaggcgcctctgaagttagaggagtgtgca
ctacaagtgtcccctaatggaaactacctggatctggattcttcactgacagagcagagg
gatgaactggaacagttttacgaagacatagctataggcaaaaagcccatcctcatcctc
cgtacccagctgtcggtccgcgtccactccatcctagaaaagctgtataactcccaaggg
ccggaactccgccgctccctcttctccttaaagcagctgtttcaggatgataaggacctg
gtaccagagttcgtgaactctgatggcctgacttgttttataaaagtgggcgcagaagcg
gaccacaactaccaaaactacatcctaagagctctcagccaaatcatgttgtttgtggat
ggcatgaatggagtgataaaccataacgagacggtgcagtggctctacaccctcactggc
agcatgtctcggctggtcgtgaagacggctctgaagctgctgatagtgtttgttgaatac
actgagtctaacggtcccctgctcatacaagctgtcaacacggtggatgttaaacgaggt
gtgaaatcctggtcatacttgactgatatgctggaggagaagaatgggtctgatacagag
ctcctggtctacactatgacccttatcaacaagactttagcggctctgccagatcaggac
tcgttctatgatgtgactgactctcttgagcagcagggaatggaacgcatcatgcagaaa
cacatgagcagccgaggcattgaccccgacctcaagcagcagtttaccatatacgagaat
gctctaaagtatgaggacggagagatggatgaagcatgtccacacatccgaaaggagcgc
aggaaagtggccagcagtgagcaggaaggcaggagaagccgacgggcttctgcacagagc
tttccagacgttccactctcttcctctctccctgcatcttcatcttcatcagtctcctct
cacagtcccactacaggtctgagccgtgccacgtctcctttaccctcagacaggccatcc
tcccctatacccactgtcagtgttagcccagaaccattcagcccgtcctccagtgtatct
gagtccccctctcagagctcctcccctgtaacgtcccctgtagtgagcaatggaacggca
gccaattcctcggacctggagcagcgcctggggcgctctttcatgagtcagtacatggct
catatggggatttctaggcggaggttaaaaaaggcggggtccataacagaggagccctcc
accccctccaaaagcacatctcccacagcggcgcctccccaggagaagcagacagagccg
gagcagcagaaccacacggagggaaaaggaggctttaactcagaggattgtagtgtgaat
aaggaccggcctgttctgaggaactatgcagacacgtttctgcgcactctggcagcaaca
cactgggagaagaggaagccccagcccgtgaagcagcaggtctctctgagtgagagcgtg
tctcctgacccagacgtctactctcagtctactgaaacggagcagccagcctctgaagag
acgggtcacagcagtggtcaagagccccagtctccagggggagactccagcaggagaagc
ccctccccgagcagactggagcagccaggagaaccacacaccacccagcagaatgaacca
ggggacagcgtacaacggcagggcagcgtggcggagcggcacagcaccctctccaatgac
aggaagttcatgctggacatgctttatgccaagtcctccacttccagcggcaccggcagt
aactctgggcctctaaagagccctagcatggacgagagtttagcagaaagtggtggagtc
gaagatgcaagcatctccagcctggctggccgtctgtccagcctccgctcgcactcctcc
cagtccagcgaggatgcgtcccggcgggcggaactggaggggctgggtggcagtgcccaa
gcggcacgggccaggctggcagaggagcagaagcaccggcgggtacgaccacagtacagc
attgatgcagagacacattcacgcagtctggagaagaccatgatgaccccactgtccagg
gacaaccaggaagcgtgggagaatctgcagcccagctctaaagccctgcggatcaaagac
ctggacttctctgaccttctggaggaggaggacattgatgtgctggatatagacacgttc
gacactggcatggtcaatggtataccaccacctccaccacccggaggaggactgggttgt
cttcctcctcctccacctcctcctcctccacctgggcttgcaggactgtctcctccacca
cctcctcctcctccaccatcttctgcaagacttagtggacctccacctcctcctccaccc
ccaggaatgccccctcctcctccctctctggccgcagaccctgccttcatcaagaaacgc
aaaacggtcaaactgttctggaaggagctcaagcagcctgacagccccaggaagtgtaag
tttggacggggcacagtgtgggcgtctctggacaaggtcagtgtggacacggacaagctg
gagcatttgtttgagtccaaggcaaaggatcttcctgtggcaaagaaaggtgctgaggtg
aagagagcagaaattcatgttctggattctaagaggagcaacgccataaacatcggcatg
actgttttacctgctgtgcacatcatcaaaactgctattctcaactttgatgaattcgcc
atcagcaaagaagggattgagaaaattctgactatgactcccacagaagaggagaagcag
aagatccaggaggctcagctggccagtcctgacgtgcctctggggacagcagagcagttt
ctgctcactttatcgtccatcagtggccttacagcacgcctgcaactctgggccttcaaa
ctcaactatgagagcctggagaaggagatagcagagcccctcttcgacctgaagctcggc
atggagcagcttgccaagaacaagaccttcaagcgtatcctagcaaccctgctggccatc
ggcaactttctcaacagctccagcgcgaagggatttgagctgagttacctggagaaggtg
attgaggtgaaggacaccgtgcacaggcagtctctgttgcatcactgctgtaactttgtg
gtggagaattacccagacacgtcagacgtctactcagaaatttcagccatcacccgctct
gctaaagttgactttgagcagttatccgacaacctggttcagctggagagaaagtgcaag
acatcgtgggacaacctgaaggtcatggccaagcatgagaccaaactccagctgaagaac
aaaatgacagagtttctcaaagactgcacagagaggatcatcattctgaaagtggtgcac
agacgcattatcaataggttccactcatttcttttataccttggtcagccatcctattcg
gtccgggacactaaaataactcagttctgcaagatcatcagcgagttctctctggagtac
cgtaccaccagagagagggtcctcactcagaaacgcaagcgggcagcccaccgggaacgc
accaagacccgcggcaaactgatcaccgaaactgagaaattctctggagccgtcccgtcc
atctcccaggatagcccctcccccgtctccatgacgacggaagccgagccagcccaagag
gaacatgagaacatgaagaacctgcttatcgctaatgatgaccgaagcaaactgcgcagg
tcccgcgctgtacgaagtatgggaagagtcagtccatcgccatctatggtcaaagaggat
ggggtaaatttgccagatgatgcaacagatgagatcatggatagactggtcaagtctgtt
acccagaatccctcagagagggcctctagccctaaagagaggaagaggtcacggctgaac
aggaaatcattacggaggacactaaagagtgggctgagtgtggacgtggtgcaggcgctg
ggtctcaacaaggctactgagaaagtttga
DBGET
integrated database retrieval system
