Astyanax mexicanus (Mexican tetra): 103022291
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Entry
103022291 CDS
T05042
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103022291 (ssrp1b)
03036 Chromosome and associated proteins [BR:
amex03036
]
103022291 (ssrp1b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
103022291 (ssrp1b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
103022291 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103022291
NCBI-ProteinID:
XP_049337138
LinkDB
All DBs
Position
7:44535347..44568114
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AA seq
701 aa
AA seq
DB search
MADNLEFNDIYQEVKGSWNDGRLRFSKQTVVYKNSKTGKVDSIPVPELTQAQWRRVCLGH
GIKLCTSTGHVYKYDGFKDTDLEKISEYFKANYKVELAEKDMCVKGWNWGTAKFNGPLLS
FEVSDSPVFEIPLSSVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPTTADEGADPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEDEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEGMKAKDDMYSDSDDDQHDAYLERMKQEGKIREEANDSDDSEAGSDES
FNPGEEDDDIAEEYDSKASASESSGDEADSDDERKKKPAKKAKIVKEKKTRKKEKKQKDI
GAPKRPMSAYMLWLNSSRERIKGENPGISVTEISKKAGEMWKQLSKEKKEEWDGKAEEAK
KDYERAMKEYRESGGGSASSSKKERKKAAKSEKKKKKKSGRGKEREKEKPSGNDSFKSRE
FISSEESSSESDRGKGRKRKGSDVEEEAMSTPRSSEDSGSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatctggagtttaatgatatttatcaggaagttaagggttcttggaacgat
gggcgtctacggttcagtaagcagacagtggtttataaaaacagtaagacggggaaggtg
gacagtatccctgtcccagagctcactcaggcccagtggaggagagtctgcctgggacac
ggcatcaagctctgcaccagcactggacacgtctataaatatgacggctttaaggacacg
gacttggaaaaaatctcagagtattttaaagccaattataaagtggagctggctgagaaa
gacatgtgtgtgaaaggctggaactggggaactgctaaattcaatggcccactgctgtca
tttgaggtgagtgacagccctgtgtttgagattccactctccagcgtttctcagtgtgca
actggaaaaaatgaggtcacactcgaatttcatcagaatgatgacacagaggtgtccctc
atggaagtgcggttttatgtcccgcccaccacagcagatgagggagcagaccctgtggag
gcgtttgctcagaatgttctttctaaggcagacgtgatccaggccacaggagatgctgta
tgcatcttcagagagctgcagtgtctcactcccaggggcaggtatgacatccgtatctac
cccaccttcctgcatctgcatggtaaaacatttgactacaagattccttacaccacggta
ctgcggctcttcctgctccctcacaaagaccagagacagatgttctttgtgatcagtctg
gatcctccaattaaacagggtcagacccgttatcacttcctcatcttgctcttttctaaa
gaagaggacatcaatctcaccctcaacatgagcgaggatgaggtggagaggcgctttgag
gggaagctaaataagaacatgtctggttcgctgtatgagatggtcagcagagtaatgaag
gctctagtgaacaggaagatcacagtacctggaaacttccagggtcactctggtgcacag
tgtattacatgctcttataaggccagctctgggctgctgtatcctctcgagaggggcttc
atttatgttcacaagccaccagtccacctgcgctttgaggagatctcctgtgtgaacttt
gccagaggcaccacaaccactcgctcctttgactttgaaatcgagaccaaacagggcagc
cagtacactttcagcagtatagagagagaagagtatggaaagctgttcgactttgtcaat
gctaagaaactcagcatcaaaaacagaggctttaaagagggtatgaaggccaaggatgac
atgtacagcgactcggatgatgaccaacatgatgcctatttggagcgtatgaaacaggag
ggcaaaattcgtgaggaggccaatgacagtgacgattcagaggctggcagtgatgaatca
tttaatcctggagaagaagatgatgacattgcggaagaatacgatagtaaggcctctgca
agcgagagcagcggtgatgaagcagacagtgatgatgagagaaagaagaaaccagccaaa
aaggccaaaatagtgaaagagaaaaaaacacgcaagaaagagaaaaagcagaaggacatc
ggtgcccccaagaggcccatgagtgcatacatgctttggctgaactcgagcagagagcgc
attaagggggaaaatcctggaatctctgtaactgagatttctaagaaggctggcgagatg
tggaagcaactaagtaaagagaagaaggaggagtgggatggaaaagcagaagaagctaaa
aaagactatgagcgagcgatgaaggagtacagggagagcggaggaggctcagcaagctcc
tcaaaaaaggaaaggaagaaggcggcgaagagtgagaagaaaaagaagaagaaatcgggc
agagggaaggagagagagaaggagaagccaagcgggaacgacagctttaagagccgggag
ttcatctccagtgaggagagttcatcagagtccgaccggggcaaaggtcgcaaacgcaaa
ggctcggatgttgaagaagaagcaatgagcactccacgtagctcagaggattcaggctca
gactga
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