Astyanax mexicanus (Mexican tetra): 103022312
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Entry
103022312 CDS
T05042
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103022312 (vps50)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Others
EARP complex
103022312 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
ERp29
Motif
Other DBs
NCBI-GeneID:
103022312
NCBI-ProteinID:
XP_007259862
Ensembl:
ENSAMXG00000014299
UniProt:
A0A8B9JWM1
LinkDB
All DBs
Position
3:48240928..48444284
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AA seq
990 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESMADMSPVENFRIPSKEELRELREQPIDPQAEQELIDSIEEI
YFSNDSFDMVQYELEKLPPELNLQELEEYRDKLKQQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLSSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKEEAAVPDAD
GTNSESPGDSTVGRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
IAQLHEFKFMGQCRSPSVSPSRQPTSSEPVELSLFEQFVQGGNPFEMQIDNKEEETEDVL
ASNGYESDELEKNVYQDYDSDSDVAEELKQDYVDEQTGDVPAKSVSRETLRSRKRSDYNL
NKANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNEM
HATCPSTPVPGGQPGGSRQVPPGCWYESPGLGLISSRLRTTLNRIQESLIDMETGGESIG
PHGPTEERKEKVPSPHLSQLVVLTASGTLYGLAERVVATESLVFLAEQFELLQPHLDTMM
PPAKKPFLQQFYSQTVSTASELRKPTYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNV
YVDVLLKEFEQFNKRLGDVSRQVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGR
ALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLAN
LVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctgatgtcccgccagggcttgaaaagccctcaggagagtatg
gcagatatgagccctgtagagaacttcaggatccccagcaaggaggagctaagggagctt
agggagcagcccatcgatccccaggctgagcaggagctcattgacagcatagaggagatt
tacttctccaacgactcctttgacatggttcagtatgagcttgagaaactccccccagaa
ctgaacctgcaggaactggaagagtacagagataagctgaaacagcagcaagcagccgtg
tcgaaaaaagtggcagacctcattctagagaagcagccatcctatgtgaaggagctggaa
cgagttacgtccctccagaccaacctgcagctggccgcagtcatctgcaccaacgctagg
aggcagctgagctctgctaaagagggcttcacagaagctagtctagggctcctagccaac
cagagacggagacagctgttgacaggattgctgaagtcgttaagaaccataaagactctg
caaagaacagatgttcgactcagtgagatgctggaggaggaggactatccaggtgcgatc
cagttgtgtttggaatgccagaaggctgccagcactttcaagcactacagctgcatcagt
gagctaaactcaaagctgcaagacaccctggaacagattgaggagcaactggatgtggct
ctgtccaaaacctgcaagcactttgatgtctcgcactacaccaaagttcagcttgcatac
acactcctgggcaagacgcagactgctatggatcagctccacatgcactttacccaggcc
attcacaacacagtgttccaggtggtgctgggctatgtggagctgtgtgctggcaacgca
gataccaagttccagaagatgcagtacaaagatctctgcacgcacatcactccagacagc
tacatcccctgcctgacggacctctgcaaggctctgtgggaggtaatgctcagctactac
cggaccatgcagtggcacgaggagcatgacaaagaggaggcggctgtccctgatgcagat
ggaacaaatagtgaaagccccggcgattctacagtgggtcgcagctatgtgaagaagaag
ctggagcatggcctcacccgcatttggcaggacgtccagctaaaagtgaaagcctattta
ctcggcacagacatgtccaacttcaagtacgacgacttcattgtggtgctggatgttatc
agcaggctaatgcaagtgggggaagagttctgtggcagtaagtcagaggtgctgcaggag
tccattaagaggcagagtgtgaattactttaagaactatcacagaactcgcctggaggaa
ctgaggatgtttctggaaaatgaaacgtgggagttgtgccctgtgaagtccaacttcagc
attgcccagcttcatgagtttaagttcatgggacaatgccgatctccatcagtttcccca
agccgacagccgacttccagcgagcctgtggagctctccctgtttgagcagtttgttcaa
ggaggaaacccttttgagatgcagatagacaataaagaagaggagactgaagatgtcttg
gcctccaatgggtatgagtcagatgagctggagaagaatgtatatcaggactatgacagt
gacagtgatgtggcggaagagctgaagcaggactatgtggatgagcagaccggagatgtt
cctgctaaaagcgtgtccagagagacgctgcgcagcagaaagaggtccgactacaatctg
aacaaagccaacgcccccattctgaccaacaccaccctcaacgtgatccggctggttggc
aagtacatgcagatgatgaacattctaaaacccatcgcctttgatgtcatccactgcgtt
tcccagcttttcgactattacctgtacgcagtctacaccttcttcggccggaatgaaatg
catgctacttgtccatccacacccgtcccaggtggccagccgggaggctccagacaggtg
ccccccggctgctggtatgaatcaccagggctgggtctgatcagcagcagactgaggact
acgctcaaccgcatccaagagagcctcatagacatggagacaggaggggaaagtataggc
ccccatggacccacagaggagaggaaggagaaggtacccagccctcacctgagccagctg
gtggtgctgacggccagcgggacactctacggcctggctgagagagtggtcgccacagag
tcgctagtgttcctggccgagcagtttgagctcctgcagcctcatctggacaccatgatg
cctccagccaagaaacccttcctccagcagttctactcacagacggtgtccacggccagc
gagctgcgcaagcccacttactggatcgtggcagccaaagccatcgattatgagcagatg
ctgctgctgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaatgtc
tatgtggatgtccttttaaaggagtttgagcagtttaataaaaggcttggagacgtctcc
agacaagtccggatccctttgccggtgtccaacgtcctctgggagcactgcatccgactg
gccaacagaacgctagtagagggctatgctaatgtgaagaagtgcagtaacgagggacga
gccctgatgcaactggacttccagcagttcctcatgaagctggagaaactgactgacctc
aggcccatcccagataaggagtttgtggagacctacattaaagcttactacctgactgag
aatgacatggagcagttcatcaagaaccacagggaatattccatgaagcagctggccaac
ctggtcaacgtgtgcctcggctcccacatcaacaagaaggccaggcagaaactcctcgca
gctattgatgacattgaccgaccaaaaagataa
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integrated database retrieval system
