Astyanax mexicanus (Mexican tetra): 103022349
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Entry
103022349 CDS
T05042
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103022349 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103022349 (lsm1)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103022349 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
103022349 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
103022349
NCBI-ProteinID:
XP_007247176
Ensembl:
ENSAMXG00000005441
UniProt:
A0A8B9GX23
W5KDB8
LinkDB
All DBs
Position
12:complement(32067663..32070281)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRVEQQAKQESEKRKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccaggcaccgccagcctcattgaggacatcgacaaaaagcaccttgtt
ctgctcagagatgggagaacactgattgggatcctcagaagtatagatcagtttgcaaat
ttagttttgcatcaaacagtggaacgtatccacgttggtaagaagtttggagacataccc
cgagggatctttgttgtcagaggagaaaatgttgtcttacttggagaagtagacctagat
aaagaatgtgatcagatccttcagagagtttccattgaggaaattctggaggagcagcgg
gtggagcagcaggcaaagcaggagtctgagaagcggaaactacaggcagtaaaggagcga
ggcttgtccatccctaaagcagacacattggatgatttctga
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integrated database retrieval system
