KEGG   Astyanax mexicanus (Mexican tetra): 103022365
Entry
103022365         CDS       T05042                                 
Symbol
jarid2a
Name
(RefSeq) protein Jumonji isoform X1
  KO
K11478  protein Jumonji
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103022365 (jarid2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103022365 (jarid2a)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103022365 (jarid2a)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     103022365 (jarid2a)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 103022365
NCBI-ProteinID: XP_049336674
Ensembl: ENSAMXG00000017562
LinkDB
Position
6:complement(4895313..4985206)
AA seq 1237 aa
MSKERPKRNIIQKKFDDNDGIPWSEERVVRRVLYLSLKEFKRAQKSKVENGTGIINRSFA
NGHLNGSGAKAGLFTGSCKAERSRRTAQTSNDDSEYSGEGPARKRPRLQAQRKFAQSQPS
SPNATPVKLLETMPPSPSLPLSDLTKCKPKTEDFLTFLCLRGSAALPSNMKYFGSAQDDE
DAEEEEEDEDEVQKEPAASVASTSCQASPRKSKAPSRVVANGHVFNGQPRATGERESSLR
VRGKDGAQGRDRGSGSSARASTTHNLRPCKPAPEQKPQPSKVQRPQRAASANSRKARKED
LPPPLPTKAVKYPKGHVTYTKARLLKEAKLDPSAHRRHLSSQHTHAHLQHINSGKAQIGQ
GKTQKQVLSSAANGCCPRLSGLTNGRPSGPAACPPRRDGLRQSKRQLEMVKAGAASQTEA
GMEVEVKRVKVQVVPLDTRSRRVAQEAAATVGTRTRATQAAGSQRPRRASAGKLMLTKQT
HCTATTRARSSPTTSTQNPNRDTLKPATVPKPAKPPRSSAPIKTPTAPEPAEPPKPAEPR
VVQERERGRRGTIPEMTEVPVFHPVPREFHDPLTYVDVMRQRAEPFGLFRVVPPAGWRPE
CKLKEEMRFVSHVQHVHKMGRRWGPNVQRLACIRKHLRAQGINMEEPPLIGGCELDLARF
FQLLNDMGGMQQVTDLKTWGRLADLLGIPRSAQDRLAKLQEAYCQYLLSYDSLSPGQQAQ
LEKDVLAEKESLEKKSGPLEGQADISQHAALVLPRCEPKNGLVNGALHRSGVRERLRELD
PTARSSRPRRLDKKGEDDGVLNELNKCIYKGKSFSLMTFYRAARNTMNMCFSKEPDTAQV
EQEYWRLVEGKECHVAVHCGRVDTKTHGSGFPVGKSEPFSKHGWNLTVLSNNSGSILRHL
GAVPGVTIPWLNIGMVFSTSCWSRDQNSLPYIDYLHTGADCIWYCIPAEEKSKLDKVVHT
LLQANGTPGLEMLEKNIMISPEVLRREGVKVHRTVQRTGQFMVCFPGTFVSKVCCGYSVS
ETVHFATPEWMKLGYEAAKDLKRRRIEEPFSTEKLLCQIVTSESKPENRNLLNAASSLIV
DLRDTEISQRRELFKSGLRLSARYGIQPDNHSLTERKKPQRTRLAEDTADRRCQVCQHLC
YLSMVVHESDNVVFCLECALRYIQKRRSPRGLKMMFRYTEEQLNSLVNRVSGKASERTGE
KRKAANPSTPPAKRSPRNRSSTQVSTLRSASKNPSRS
NT seq 3714 nt   +upstreamnt  +downstreamnt
atgagcaaggaaaggccgaagaggaacatcatccagaagaaattcgacgataatgacggg
atcccctggtcggaggagagagtggtgcgcagagtgctctacctctccctcaaagagttc
aagagagcacagaagagtaaagttgaaaatggcacaggaatcataaaccgttcctttgcg
aatggtcatctgaacgggtcaggagccaaagcaggactgttcacaggcagctgtaaggcg
gaaaggtctcggcgcacggctcagaccagcaacgatgacagcgaatactcaggagaaggg
cctgcaagaaagaggccaaggctgcaagcacagaggaaatttgcccagtctcagccaagc
tctcccaatgcaactccagttaaattactggagaccatgccacccagtcccagccttcct
ctcagtgatctcaccaagtgcaaacccaaaacagaggacttcctcaccttcctttgtcta
agaggttctgctgcgttgcccagcaacatgaagtacttcggcagtgctcaggatgatgaa
gacgcagaagaggaagaagaagacgaggatgaggtgcaaaaggagccggcggctagcgtt
gcatccacttcttgtcaggccagtccacgcaagagcaaagccccaagcagggttgtggcc
aacggccatgtgtttaacgggcagccacgggcgacaggggagcgggagagcagcctgagg
gtcaggggcaaagatggagcccaggggagagacagaggctccggatcatcggccagagct
tccaccacacacaacctgcggccctgcaagcctgcaccggagcaaaaaccacagccctct
aaagtgcagcgaccgcagagagccgcctctgctaacagccggaaagcgcggaaggaagat
ctcccacctcctctcccgaccaaagctgtgaaataccccaagggccacgtgacctacacc
aaagccagactgttgaaagaggccaagctggacccgagcgcgcacagacgccacctgagc
tcgcaacacacccatgcacaccttcagcacatcaactcaggaaaagcccagatcggccag
ggcaagacgcagaaacaggtgctatcatctgcagccaatggctgctgccccaggctgagc
ggactgaccaacggcaggccgagcgggcctgctgcgtgcccaccccggcgggacggatta
cgacagtcgaagaggcagctggaaatggttaaggcgggagcagcgagtcagactgaagca
gggatggaggtggaggtgaaaagggtaaaagtgcaggtggttcccctcgacacacggagc
aggagagtggctcaggaggcagcggcaaccgtaggaacccgcactagagcgacacaagca
gcaggatcccagagacccagacgagcctccgccgggaagctcatgttaacgaaacagaca
cactgtacagccacaactcgggccaggagcagccctactacctcaacccagaaccccaac
agggacaccctgaaaccagccacagttcctaaaccagccaaaccgcccaggtccagcgct
cccatcaaaacgcccaccgcgcccgaaccagccgagcctcccaaaccagcagagcccaga
gtggtccaggaaagggaacggggtaggcgcggcaccatccctgaaatgacggaggttccc
gtcttccaccccgttccgcgtgagtttcacgatcccctgacgtacgtggacgtgatgcgc
cagcgggccgagccgttcggcctgttccgcgtggtcccgccagcgggctggcggcccgag
tgcaagctgaaggaggagatgcgcttcgtgtctcacgtgcagcacgttcacaagatgggt
cggcgctggggtcccaacgtacagcggctcgcctgcatcaggaagcacctgcgagctcag
ggcattaacatggaggagccaccattaatcggcggctgtgaactggacctggcccgcttc
ttccagctcctgaacgacatggggggcatgcagcaggtgacggacctgaagacgtggggg
cgactggccgacctgctgggcatcccgcgctcagcccaggaccggttggctaagctccag
gaggcctactgtcagtatctgctgtcctacgactcgctgtcgccgggccagcaggcccag
ctggagaaggacgttctggccgagaaggagagcctggagaagaagagcgggcccctggag
ggccaggccgacatttcccagcacgctgctctggtcctgccgcgctgcgagcccaagaac
ggcctggtgaacggagcgctgcaccggagcggggttcgggagcgcctccgtgagctggac
cccacggccaggagcagtagaccaagaagactggacaagaaaggagaggacgacggggtg
ctgaacgagcttaacaaatgcatatacaagggaaaatcattctccctaatgacgttttac
cgtgcagccaggaacaccatgaatatgtgcttcagcaaagagccggacacagctcaagtc
gagcaagagtactggagactggtagagggaaaagaatgccatgtcgcagtgcactgtggg
cgagtggacacaaagactcatgggagtggatttcctgtgggcaagtctgagccattttca
aagcatggatggaatctcactgtcctttccaataactcaggatccatcctgcgtcatctt
ggtgctgtgccaggagtgaccatcccctggctgaatataggcatggtcttttctacctca
tgttggtccagggaccagaatagccttccatacatagattacctacacactggtgctgat
tgcatttggtactgtattcctgccgaggagaagtcaaaacttgacaaagtagttcacaca
ctgctgcaggccaacggaaccccagggctcgagatgctggagaagaacattatgatctct
ccagaggtgctccgtcgagagggggtgaaggtgcaccggacagtgcagcggactggccag
ttcatggtgtgtttcccggggacctttgtgtccaaggtgtgttgtggctatagtgtgtct
gagacagtgcattttgccacacctgagtggatgaagctgggctatgaggcagcgaaggac
ctgaagaggagacgcatagaggagccattctctactgagaaactgctttgccagattgtg
acgtcagaatccaaaccagagaacagaaatcttctgaatgcagcttcctctcttattgta
gatctcagggacacagagattagccagcggcgggagctttttaagtctgggcttcggctg
tccgcccgttacggcattcagcccgataaccattccctcacggagaggaagaaaccgcag
cgcacgcggctggccgaggacacggctgaccggcggtgccaggtgtgccagcatctgtgt
tacctctccatggtggtgcatgaaagcgataacgtggtgttctgtctggaatgtgctctt
cggtatatccagaagcgcaggtcccctcgaggtctgaagatgatgtttcgttacactgag
gagcagctcaacagtttggtaaaccgggttagcggtaaagcatcggaacggaccggagag
aagaggaaagcggccaatcccagcactccaccagcaaaacgaagccccagaaacaggagc
tccacccaggtctccacgttgcgctccgcctcaaagaacccctcccgctcttga

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