Astyanax mexicanus (Mexican tetra): 103022365
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Entry
103022365 CDS
T05042
Symbol
jarid2a
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103022365 (jarid2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103022365 (jarid2a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103022365 (jarid2a)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
103022365 (jarid2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
103022365
NCBI-ProteinID:
XP_049336674
Ensembl:
ENSAMXG00000017562
LinkDB
All DBs
Position
6:complement(4895313..4985206)
Genome browser
AA seq
1237 aa
AA seq
DB search
MSKERPKRNIIQKKFDDNDGIPWSEERVVRRVLYLSLKEFKRAQKSKVENGTGIINRSFA
NGHLNGSGAKAGLFTGSCKAERSRRTAQTSNDDSEYSGEGPARKRPRLQAQRKFAQSQPS
SPNATPVKLLETMPPSPSLPLSDLTKCKPKTEDFLTFLCLRGSAALPSNMKYFGSAQDDE
DAEEEEEDEDEVQKEPAASVASTSCQASPRKSKAPSRVVANGHVFNGQPRATGERESSLR
VRGKDGAQGRDRGSGSSARASTTHNLRPCKPAPEQKPQPSKVQRPQRAASANSRKARKED
LPPPLPTKAVKYPKGHVTYTKARLLKEAKLDPSAHRRHLSSQHTHAHLQHINSGKAQIGQ
GKTQKQVLSSAANGCCPRLSGLTNGRPSGPAACPPRRDGLRQSKRQLEMVKAGAASQTEA
GMEVEVKRVKVQVVPLDTRSRRVAQEAAATVGTRTRATQAAGSQRPRRASAGKLMLTKQT
HCTATTRARSSPTTSTQNPNRDTLKPATVPKPAKPPRSSAPIKTPTAPEPAEPPKPAEPR
VVQERERGRRGTIPEMTEVPVFHPVPREFHDPLTYVDVMRQRAEPFGLFRVVPPAGWRPE
CKLKEEMRFVSHVQHVHKMGRRWGPNVQRLACIRKHLRAQGINMEEPPLIGGCELDLARF
FQLLNDMGGMQQVTDLKTWGRLADLLGIPRSAQDRLAKLQEAYCQYLLSYDSLSPGQQAQ
LEKDVLAEKESLEKKSGPLEGQADISQHAALVLPRCEPKNGLVNGALHRSGVRERLRELD
PTARSSRPRRLDKKGEDDGVLNELNKCIYKGKSFSLMTFYRAARNTMNMCFSKEPDTAQV
EQEYWRLVEGKECHVAVHCGRVDTKTHGSGFPVGKSEPFSKHGWNLTVLSNNSGSILRHL
GAVPGVTIPWLNIGMVFSTSCWSRDQNSLPYIDYLHTGADCIWYCIPAEEKSKLDKVVHT
LLQANGTPGLEMLEKNIMISPEVLRREGVKVHRTVQRTGQFMVCFPGTFVSKVCCGYSVS
ETVHFATPEWMKLGYEAAKDLKRRRIEEPFSTEKLLCQIVTSESKPENRNLLNAASSLIV
DLRDTEISQRRELFKSGLRLSARYGIQPDNHSLTERKKPQRTRLAEDTADRRCQVCQHLC
YLSMVVHESDNVVFCLECALRYIQKRRSPRGLKMMFRYTEEQLNSLVNRVSGKASERTGE
KRKAANPSTPPAKRSPRNRSSTQVSTLRSASKNPSRS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaaggccgaagaggaacatcatccagaagaaattcgacgataatgacggg
atcccctggtcggaggagagagtggtgcgcagagtgctctacctctccctcaaagagttc
aagagagcacagaagagtaaagttgaaaatggcacaggaatcataaaccgttcctttgcg
aatggtcatctgaacgggtcaggagccaaagcaggactgttcacaggcagctgtaaggcg
gaaaggtctcggcgcacggctcagaccagcaacgatgacagcgaatactcaggagaaggg
cctgcaagaaagaggccaaggctgcaagcacagaggaaatttgcccagtctcagccaagc
tctcccaatgcaactccagttaaattactggagaccatgccacccagtcccagccttcct
ctcagtgatctcaccaagtgcaaacccaaaacagaggacttcctcaccttcctttgtcta
agaggttctgctgcgttgcccagcaacatgaagtacttcggcagtgctcaggatgatgaa
gacgcagaagaggaagaagaagacgaggatgaggtgcaaaaggagccggcggctagcgtt
gcatccacttcttgtcaggccagtccacgcaagagcaaagccccaagcagggttgtggcc
aacggccatgtgtttaacgggcagccacgggcgacaggggagcgggagagcagcctgagg
gtcaggggcaaagatggagcccaggggagagacagaggctccggatcatcggccagagct
tccaccacacacaacctgcggccctgcaagcctgcaccggagcaaaaaccacagccctct
aaagtgcagcgaccgcagagagccgcctctgctaacagccggaaagcgcggaaggaagat
ctcccacctcctctcccgaccaaagctgtgaaataccccaagggccacgtgacctacacc
aaagccagactgttgaaagaggccaagctggacccgagcgcgcacagacgccacctgagc
tcgcaacacacccatgcacaccttcagcacatcaactcaggaaaagcccagatcggccag
ggcaagacgcagaaacaggtgctatcatctgcagccaatggctgctgccccaggctgagc
ggactgaccaacggcaggccgagcgggcctgctgcgtgcccaccccggcgggacggatta
cgacagtcgaagaggcagctggaaatggttaaggcgggagcagcgagtcagactgaagca
gggatggaggtggaggtgaaaagggtaaaagtgcaggtggttcccctcgacacacggagc
aggagagtggctcaggaggcagcggcaaccgtaggaacccgcactagagcgacacaagca
gcaggatcccagagacccagacgagcctccgccgggaagctcatgttaacgaaacagaca
cactgtacagccacaactcgggccaggagcagccctactacctcaacccagaaccccaac
agggacaccctgaaaccagccacagttcctaaaccagccaaaccgcccaggtccagcgct
cccatcaaaacgcccaccgcgcccgaaccagccgagcctcccaaaccagcagagcccaga
gtggtccaggaaagggaacggggtaggcgcggcaccatccctgaaatgacggaggttccc
gtcttccaccccgttccgcgtgagtttcacgatcccctgacgtacgtggacgtgatgcgc
cagcgggccgagccgttcggcctgttccgcgtggtcccgccagcgggctggcggcccgag
tgcaagctgaaggaggagatgcgcttcgtgtctcacgtgcagcacgttcacaagatgggt
cggcgctggggtcccaacgtacagcggctcgcctgcatcaggaagcacctgcgagctcag
ggcattaacatggaggagccaccattaatcggcggctgtgaactggacctggcccgcttc
ttccagctcctgaacgacatggggggcatgcagcaggtgacggacctgaagacgtggggg
cgactggccgacctgctgggcatcccgcgctcagcccaggaccggttggctaagctccag
gaggcctactgtcagtatctgctgtcctacgactcgctgtcgccgggccagcaggcccag
ctggagaaggacgttctggccgagaaggagagcctggagaagaagagcgggcccctggag
ggccaggccgacatttcccagcacgctgctctggtcctgccgcgctgcgagcccaagaac
ggcctggtgaacggagcgctgcaccggagcggggttcgggagcgcctccgtgagctggac
cccacggccaggagcagtagaccaagaagactggacaagaaaggagaggacgacggggtg
ctgaacgagcttaacaaatgcatatacaagggaaaatcattctccctaatgacgttttac
cgtgcagccaggaacaccatgaatatgtgcttcagcaaagagccggacacagctcaagtc
gagcaagagtactggagactggtagagggaaaagaatgccatgtcgcagtgcactgtggg
cgagtggacacaaagactcatgggagtggatttcctgtgggcaagtctgagccattttca
aagcatggatggaatctcactgtcctttccaataactcaggatccatcctgcgtcatctt
ggtgctgtgccaggagtgaccatcccctggctgaatataggcatggtcttttctacctca
tgttggtccagggaccagaatagccttccatacatagattacctacacactggtgctgat
tgcatttggtactgtattcctgccgaggagaagtcaaaacttgacaaagtagttcacaca
ctgctgcaggccaacggaaccccagggctcgagatgctggagaagaacattatgatctct
ccagaggtgctccgtcgagagggggtgaaggtgcaccggacagtgcagcggactggccag
ttcatggtgtgtttcccggggacctttgtgtccaaggtgtgttgtggctatagtgtgtct
gagacagtgcattttgccacacctgagtggatgaagctgggctatgaggcagcgaaggac
ctgaagaggagacgcatagaggagccattctctactgagaaactgctttgccagattgtg
acgtcagaatccaaaccagagaacagaaatcttctgaatgcagcttcctctcttattgta
gatctcagggacacagagattagccagcggcgggagctttttaagtctgggcttcggctg
tccgcccgttacggcattcagcccgataaccattccctcacggagaggaagaaaccgcag
cgcacgcggctggccgaggacacggctgaccggcggtgccaggtgtgccagcatctgtgt
tacctctccatggtggtgcatgaaagcgataacgtggtgttctgtctggaatgtgctctt
cggtatatccagaagcgcaggtcccctcgaggtctgaagatgatgtttcgttacactgag
gagcagctcaacagtttggtaaaccgggttagcggtaaagcatcggaacggaccggagag
aagaggaaagcggccaatcccagcactccaccagcaaaacgaagccccagaaacaggagc
tccacccaggtctccacgttgcgctccgcctcaaagaacccctcccgctcttga
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