KEGG   Astyanax mexicanus (Mexican tetra): 103022407
Entry
103022407         CDS       T05042                                 
Symbol
stx1a
Name
(RefSeq) syntaxin-1A isoform X3
  KO
K04560  syntaxin 1A
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    103022407 (stx1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103022407 (stx1a)
Membrane trafficking [BR:amex04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    103022407 (stx1a)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 ATG17_like AAA_13 DUF5856 Dcst2 Spectrin_Anc-1 Lzipper-MIP1 Ferritin T4SS_LegC2C7 YtxH SPACA6_N DUF8314 PspA_IM30 HpsJ EcoEI_R_C DUF6079_5th DUF848
Other DBs
NCBI-GeneID: 103022407
NCBI-ProteinID: XP_007258467
Ensembl: ENSAMXG00000032256
LinkDB
Position
4
AA seq 301 aa
MKDRTQELKHGKDTEEEEEVAVGMEKGFMDEFFEQVEEIRGFIDSLSEKVEEVKRKHSAI
LAAPNPDEKTKAELEDLMTDIKKLANKVRSKLKSIQQTIEQEEGQNRSSADLRIRKTQHS
TLSRKFVEVMSEYNATQSSYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSGI
IMDSNITQQAMNEIETRHTEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAV
DYVERAVSDTKKAVKYQSKARRVSQGRTGPTCMTSICSVIFGLSCVVPVLVLCFCLCWFS
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaggaccgcacgcaggagctgaagcacggtaaggacaccgaggaagaggaggaggtg
gccgtgggcatggagaaaggcttcatggacgagttctttgagcaagtggaggagatccga
ggcttcatcgactcgctgtctgagaaggtggaggaggtaaagaggaaacacagtgctatc
ctcgccgctccgaacccggacgagaaaacgaaagctgaactggaggatctgatgacagac
atcaaaaaactggccaacaaagtgcgctccaagttaaagagcatccagcagaccatcgag
caggaagagggtcagaacaggtcgtcagctgacctgaggatacggaagacacagcactcc
actctgtcccgtaagtttgtggaggtgatgtcggagtacaatgccacacagtcgagctac
cgggagcgctgcaagggccgcatccagagacaactggagattactggcaggaacaccaca
aacgaggagctggaaagcatgctggaaagtgacaacccagctatcttcacttcggggatc
atcatggactccaacatcacccagcaggccatgaatgagatagagacccggcacactgag
atcattaagctggagaacagcatccgcgagctgcacgacatgttcatggacatggccatg
ctggtggagagccagggggagatgattgaccgtatagagtataacgtggagcacgctgtg
gactacgtggagagggccgtgtcagacaccaagaaagcagtaaagtaccagagcaaagca
cggagggtgagtcaggggcgcacggggccgacctgcatgacgtccatctgttctgtgatc
tttggcctgtcctgcgtcgtgcctgtgctggtgttgtgcttctgcttgtgctggttctct
gagtga

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