Astyanax mexicanus (Mexican tetra): 103022448
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Entry
103022448 CDS
T05042
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
amex04140
Autophagy - animal
amex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103022448 (hif1aa)
04137 Mitophagy - animal
103022448 (hif1aa)
04148 Efferocytosis
103022448 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103022448 (hif1aa)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103022448 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
103022448
NCBI-ProteinID:
XP_007247604
Ensembl:
ENSAMXG00000039550
UniProt:
A0A8B9JMG8
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All DBs
Position
7:complement(9506236..9551112)
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AA seq
721 aa
AA seq
DB search
MTSGAAPGKKRVSSERRKERSRDAARCRRGKETEVFYELSRELPLPHSLTSNLDKASVIR
LTLSYMRLRSLLHTDVSKGGELDSQWSGCCLKALDGFLMVLSHDGDVVYVSENVNRCLGL
PQIDLSGQSVFDFTHPCDHEEIREMLVHRTGSSKKIKEEPNTERRFLLRMKCTLTSRGRN
VNIRSASWKVLHCSGHIRAPVRVCVQTDDCEDRGVPASYLVLICNPIPHPASIETPLDSR
TFLSRHTLNMHFTYCDDRIKELLGYDPKDLLQQSVYEYYHALDSDSLTKTHYNLFAKGQA
CTGQYRMLVKTGGFVWMETQATVIYNSKNSQPQCVVCVNYVLSGVEDPELVLSLHQSGSM
VVKQEKKEEEEEEKKEEEEEEREKQECFQKIETAVLQDDLKEEPEVLNQLHFSSADIDAA
VLKDVPLYNDVMLPSSSVLLPLSPLLPPTDPPCASLINPDTTAAQLQLEDFSFPLSSDTD
TSSTAGDTTTCSTQPTSPLTSDHSYQCKMNSEEEIFSIEAETKTLLDAQAVKDLDLEMLA
PYIPMDDDYQLRVHSPLQSGCVSQVPASKPVQIDSAPQDQTHTCSTNTHTQPADPPPPAQ
PLQSSSRVCQPSQKLLKRKLETISLSQAVGLVVSDIPTAGKKVRRSEVTGLQALPQNTMP
ETVTILLLPSDVVAQLLAGPSEGRTLPVPLPQLTRYDCEVNAPVAGRQNLLQGEELLYAL
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaggagccgcacctgggaagaaaagggtgagctctgagaggaggaaggagagg
tcccgggacgcggcccgctgtcgcagggggaaggagacagaggtgttttatgaactgtcc
cgagaactacccctcccccacagcctcacctccaacctggacaaagcatccgtcatcaga
ctgaccctcagctacatgcgtctgcgctctctactgcacacagatgtgagtaagggaggt
gagttggattcccagtggagtggttgttgtctgaaggctctggacgggttcctcatggtt
ctgtctcatgatggagacgtagtttatgtttcagagaatgtcaacaggtgccttggactt
cctcagattgatctgtcaggacagagcgtgtttgatttcacgcacccatgtgaccatgaa
gagatcagagagatgctggtgcacagaacaggttcatctaagaaaataaaggaggagccg
aatacagaaagacgttttttgttacggatgaaatgcactctgaccagcagggggcggaac
gtcaacatcagatctgcctcatggaaggtgctgcactgctccggacacatcagagcgccg
gtcagagtgtgcgttcagacagacgactgtgaggacagaggtgttccagcatcgtacctg
gtgcttatctgcaaccctatccctcacccagccagcatcgagacgccactggactccaga
accttcctcagcagacacacactcaacatgcactttacctactgcgacgacaggatcaag
gagctgctgggatatgacccaaaggaccttcttcagcaatctgtgtatgaatattaccat
gctttggactcggacagtctgaccaaaactcactacaacttgtttgccaagggtcaggcg
tgtactggacagtaccgtatgctggtgaagactggtggctttgtgtggatggagactcag
gccactgttatttacaacagcaagaactctcagccgcagtgtgtcgtctgcgtcaactat
gtcctcagcggagttgaagatcctgaacttgtcctctctctccatcagtccggctccatg
gtggtgaagcaggaaaagaaggaagaagaagaggaggaaaagaaagaggaggaagaggag
gagagagaaaagcaggagtgctttcagaaaatagagactgcagttctgcaagatgacctc
aaggaggaaccagaggttttaaatcagctgcacttcagcagcgcagatatagatgctgca
gtgctgaaagacgtgcccctctacaatgatgtcatgttgccctcaagcagtgtcctgctg
cctctttcaccccttttgccccccaccgatcccccctgtgccagtctaatcaatccggac
accactgctgcccagctccagttagaggacttctccttcccgttatcttctgacacagac
acctccagtacagcaggggacaccactacctgctccacccagccaactagtccactgaca
tctgaccacagctaccagtgtaaaatgaacagcgaggaggaaatcttctccatagaggcg
gagacaaaaaccctactggacgcacaggcagtgaaggatttggatctggagatgttggct
ccttatatccccatggatgatgattatcagctgcgtgttcactcaccactgcagtctgga
tgtgtcagccaggttccagcatctaaaccagttcagatagattcagcacctcaagaccag
acacacacctgcagcaccaacacacacactcaacctgcagatccacctccaccagcacag
ccactgcagagttccagcagggtgtgtcagccaagccaaaaactgctcaagaggaaatta
gaaacgatttctctgtctcaggctgtaggactggtggtcagtgacatacctacagcaggt
aaaaaggtcagaaggtcagaggtgacagggttacaggctcttccacagaataccatgcca
gagactgtcaccatactacttctgccttctgatgtggtagcccagttgttggctggaccg
tctgaaggccggacacttcctgtgcccctgccccagctgacccgctacgactgcgaggtg
aacgcacctgtagctggacgccagaatctgctgcagggggaggagctactgtatgcccta
gattaa
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