Astyanax mexicanus (Mexican tetra): 103022543
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Entry
103022543 CDS
T05042
Symbol
dync1i2b
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04145
Phagosome
amex04814
Motor proteins
amex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103022543 (dync1i2b)
09142 Cell motility
04814 Motor proteins
103022543 (dync1i2b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103022543 (dync1i2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103022543 (dync1i2b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103022543 (dync1i2b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
103022543 (dync1i2b)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
103022543 (dync1i2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Dynein_IC2
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
ANAPC4_WD40
EAD5
Beta-prop_IP5PC_F
Beta-prop_DCAF4
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
103022543
NCBI-ProteinID:
XP_049335129
Ensembl:
ENSAMXG00000012530
LinkDB
All DBs
Position
5:complement(53664096..53678296)
Genome browser
AA seq
646 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDGRKEGSSPPNDDSDLERKRREA
EALLQSMGITDPAMVQPLRVVTEDTCLFHYLVPPPMSPSAKSVGSETGSQDSGDGATGPR
TLHWDSDPSTLLLHSDSQLGRLPLRLGMAKVTQVDFPPKEMVSYSKETQTPTQTQIKHAV
EDENEEEDLAVVQSTLEAPQENESQETEEEAPPHELTEEEKQQILHSEEFLTFFDHSSRI
VERALSEHVDVCFDYSGRDLQDKEGDTQGGTKLSLNRQFMDERWSKHRVVTCLDWSPQYP
ELLVASYSSNEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFARFHPNLVVGGT
YSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVSLVGSQNAHNLISISTDGKMCSWSL
DMLSTPQDSLELVFKQSKPVAVTSMSFPLGDVNNFVVGSEDGTVYTACRHGSKAGISEMF
EGHHGPVTGLDCHMAAGPVDFSHLFVTSSFDWTVKLWSTRNTKPLYSFEDNSDYVYDVMW
SPAHPALFACVDGVGHLDLWNLNNETEVPTASVTVEGNPALNRVRWANSGREVAVGDSEG
QVHIYDVGEQIAVPRQDEWTRFVRTLHELNENQEDAEELATQRLVA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataaaagtgagctgaaggcagagctggagagaaagaaacagcggctggctcag
atcagggaggaaaagaagaggaaagaggaggaacggaagaagaaagagactgatggacgt
aaggaaggctcatctcccccaaacgatgactctgatctggagaggaagcgaagggaggcg
gaggctctgctgcagagtatgggcatcactgaccctgccatggtgcagcccctgcgtgta
gtaacagaagatacatgtttgtttcattatttagtcccccctcctatgtccccctctgct
aaatcggtgggcagtgagacaggcagccaggactctggagacggagctacaggacccagg
actctacactgggactctgacccctctactctgctgctgcattcagactctcagcttggg
cggcttcctctgaggttgggtatggctaaagtgactcaggtggacttccctccgaaagag
atggtgtcctactctaaagagacacagacccccactcagacccagattaagcatgcagta
gaagatgagaatgaggaggaggacctggctgtggttcagtcgactctggaagctcctcag
gagaatgagtcccaagaaactgaagaggaggcgccccctcatgagctgacggaggaggag
aagcagcagatcctgcattcagaggagtttctcaccttttttgaccacagctctcgcatt
gtggagcgggcactctcagagcatgtggacgtctgcttcgactacagcggccgagacctg
caggacaaggagggagacactcagggtgggactaagctgtcacttaacaggcagtttatg
gatgaacgctggtccaaacacagagtggtcacctgtctggactggtctcctcagtatcct
gagctgctggtggcgtcgtacagcagtaatgaggaagctcctcatgagcctgatggagtt
gctctggtgtggaatatgaagtacaagaaaaccacccccgaatacgtcttccactgtcag
tcggcagtgatgtcagcagcgtttgctcgattccatcctaatctggtggttggaggaacc
tactctggacagattgttctgtgggacaaccggagtaacaaacgcactccagtacagaga
acaccactctctgcctctgcacacacgcacccggtgtactgtgtgagtttggtgggcagt
caaaatgcacataacctcatcagcatctccactgatggcaaaatgtgctcctggagttta
gacatgctgtccactccacaggacagtctggagctggtgtttaagcagtctaaacctgtg
gcagtgacctccatgtcttttcctctgggcgacgtcaataattttgtggtgggcagtgag
gacggcacagtctacacagcatgcagacatggaagtaaagcggggatcagtgagatgttt
gaaggtcatcacggtccagttactggattggactgccatatggctgctggacctgtagac
ttctctcacctgttcgtgacttcatccttcgactggaccgtcaaactgtggagcaccagg
aacactaagcccctgtactcattcgaggataactcggactatgtgtatgatgtcatgtgg
tcccctgcccaccctgccttgttcgcctgtgttgatggagtaggacaccttgacctgtgg
aacctcaacaatgagacagaggttccaacagctagtgtgacagtggagggaaatccagcc
ctgaaccgtgtgcgctgggcaaattcaggcagagaggttgctgttggcgactctgagggt
caggtgcacatttacgacgtgggagagcagatcgccgtgccgcggcaggacgagtggact
cgcttcgtgcgaactctccatgagcttaacgagaaccaggaggatgcagaggaactggca
acccagcgcctcgttgcatga
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integrated database retrieval system
