Astyanax mexicanus (Mexican tetra): 103022585
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Entry
103022585 CDS
T05042
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
103022585 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
103022585
NCBI-ProteinID:
XP_049337319
Ensembl:
ENSAMXG00000005822
LinkDB
All DBs
Position
7:complement(49044242..49108733)
Genome browser
AA seq
3137 aa
AA seq
DB search
MAGCLQRMDPTAPTLLKFFFFVLLSLGCCFYTTEADPFDPAFLYRRQSGPNAETILVANN
GIRVPFGRSVYLDPINDLVTEVQPGDRCHITVLDNDPLAQRPGMLTPKKFPCAFGAEEVK
YTHFGSRSPSKDHVKLQLRYDSHTDTVIIPFMLEVEVVFQQLEVLTRNMPLVVEKLNGES
NPIEKKSLEFAFEDGVTSCKVTTLVGAGGLPRYGTLSDNSVNGQMIDCEEFLRKGIRYVH
TATTKSPNRDYIPMLVEVQDNNGNTIQQEHFQIMVRIKEGAENTPPKASFTAMMMMEVDQ
FVMTAITPDMLAGEDVESDSDDLIFNITSPLGYQQGYIISTDDQNLPITSFYQRDVKDLK
IAYKPPSEDSEIERIFQIEFEIVDTDGAVSETFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRPLSTSQNLEISDEDNLEDVRISVTDGLKHGELTVLGSQRKYFTPADLDAGIVVYQHD
GSDTYSDNIIFRMTDGTNEVEFLFPITIAPTDDEPPIINANTGIVLFKNEMMQISPFILS
ATDIDSEDSTIKFILEEPYSTIGELLLRQVEPPADLSAWKFSATDEMFEQVVTYWFQQDI
LDGKLFYRHKGPHSTTTVIDHFVFRVQDDNDPPNQSGEHTFTIKIHPVDDIPPTLYPGTS
LHMTVQEYELTFFKKKFLRYTDLDCDDRDLKYTIVKAPTDTDENNPVLLGAIVLTDSPDT
VVSEFTQAQVNHHKIAYKPPDQELGITPKVVQFTFTVEDTASNSVDGLFTIFLQPVDNKP
PVITNTGFTVLERSTFIISKNELDASDQDTEEEHIIFKVIQIPRYGQLQYLEIDMSNGET
FVLEDIESGRLTYTHGGEESLTDVIKIEVSDGFHEVPIVIKISIKPVDDETPTIMLPSGL
LGASIDVLENGATEITSNVIQGKDEDTDDLMLTFIVEESPKLGEIMVNGAPAERFTQQDI
INGVVVYVHTSGEIGPIKEHDSFNLTISDMSDEWVVGGNKVQGVRVHVTILPVDSIAPIV
SVGEQFVVVEGEKNVITLDHIKTEDIDTDNDDILCTIIVQSTSGYVENISPAPGSEKSRA
GTAITAFTIKDVSLGHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPIVIIPSNDE
KPEIFIREFVVMEGMSLVIDSPILNAADADVPSDELEFEIITNPKHGSIVQQLSTGTVPV
VKFSLEQIKEASNIVYEHDDSETKEDEFKIRLTDGKHTVEEKVLIMVIPVDDETPRMAIN
DGLEVEIGETKVISKKVLKATDLDSEDKELTYIVRYGPGQGYLQRITKHGDVIGNISIGM
NFTQDELDKQLIQYVHTGQEGVRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGKVTLTTDLLSTTDINSPDEYLSFSITRAPSRGHLECTDLPGVPISTFTQLQLA
GNKVYYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTINNLVVGEGEI
KLITPFELTVEDRDTPDNLLRFVVTQVPVHGQLLYNGTQAITTFTKQDLNENLISYKHDS
TETSEDSFSFTVTDGTHTDFYVFPDTVYETRKPQMMIIQINTVDNGVPQIVVNKAAPTLR
VLHTGHLGFVITSKALKAEDRDSPNKVLKYTVAEAPLHGFIINTELGNNSIKTFSQADID
EMKICYVLLDTSNATSDIFYFTVEDNGGNKLKPQPFRLNWAWISLEKEFYLVDEDAKFLE
VTLKRRGYLGETSFVSIGTKDGTAKTDKDFRGKAQKQVQFNPGQTTATWRVKIFTDLEFE
TSETFEIQLSEPVMAVLEYPDKATVEIVDPGDESTVFIPQAEFLIEEDIGELLVPVRRSG
DASQELMVVCYTQQDTATGTIPSTVLSYSDYITRPEDHTSVLRFDKDEREKLCRIIIIDD
SLYEEEESFNVSLSMPMGGQVGASFPSAKVVILADSDDEPSLYFGETEYTVDESSGYVEV
RVWRTGTDLSKTATVTVRSRKSEPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
RPELEGPEKFELVLRMPMNAVLGEPSKTVITINDTVTDLPRVQFREAEYKVDEADGQIKA
MIYRSGDISKKSTVRCYTRQGSAQVMMDYNERPNTDASIVTFLPGENEKPCVVTLVDDSI
HEEDEEFRLVLGTPKSKTPYGAALGEQKETLVTIADRKDKSIIRFSEIKYSVKEPQAPGE
IAVVKIPVLRLGDTSKVSVVRVHTKDGSATSGEDYNPLSQDVEFKEGETEHVVEVQVLYD
GQREIREAFTVHLKPDEYMVAETQMSKAIVYIEEMDSVADVTFPAVPQVVSLLMYDDTIR
VKEHPHPPTGYPVVCVTACNPKYSEFDKTGSICAVENINDTLTQYRWLVSAPSGPDGVTS
PMREVDTNTFFTNTKSITLDSIYFQAGSRVQCAARAFNANGDAGLELSSSIVIISREEGL
CQPRIAGTVGAEPFSAKIRYTGPDDPDYPNLIKLTITMPHMDGMLPVISTRPLSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGHGFITDATKNPEIIGETSPYQYSVAMRSANSLRFYR
NLNLEACLWEFSSYYDMSELLNKCGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELRLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINEEGRLVVNFKTE
ARFRGQFVMSHPGSSLSSMVICADHPGLTFTLALIRTEPTYNQPMQQWSFVSDFAVRDYS
GTYTVKLIPCSASPNGEFSIPPVCHPREPLTFDMDIRFQQVSDPVAAEFSLNTQMFLLSK
KEVWLSDGSMGFGEGTDAAFSEGSTIYGRVMVDPVQNLGDSFSCSIEKVFLCTGTDGYVP
KYNPTNKEYGCLADAPSLLYRFKILDKAQPETQATAFGDVQFDASFAMDTPGAFTLVRQP
GTDGFTLSSSPLFQVAAGREWFIHTIYTLRSRDNANRVIGKRSLEYHHGISSVLPDSGAL
TRHRRAVPDPEALDIGAENNRGTNIQHIALDRSDRLRVSQQQPWGRETYVERPLVEGSAS
KEPGSDSALPAGMPTLLGVSGLILLVCLVVILVVLLVRRKRKEKEYPPYATSSCSAYSSA
NSRQTTSTRHSGDSSEV
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaaggatggaccccacagccccgacacttctgaagttcttcttc
tttgtgttgctgtcattgggctgttgcttctacacaacagaggcagatccttttgaccca
gcgttcctctacagacgccaatctggacctaatgcagaaacgattctggtcgccaacaat
gggattagagttcccttcggacgctcggtctatctggaccctatcaatgaccttgtcact
gaggtgcagcctggagaccgttgccacatcacagtgctggacaatgacccattggcgcag
agacctggaatgctgacccccaaaaagttcccatgtgcctttggagccgaggaggtgaaa
tacacccactttggttcacggagccccagcaaggaccatgtgaagcttcagctgaggtat
gactcccataccgacactgtgatcatccctttcatgctagaggtggaggtggtcttccag
cagctggaggtactcacccgtaacatgccgttggttgtggagaagctcaatggagaaagc
aaccccattgagaagaaaagcctggaatttgcctttgaggacggtgtcacttcgtgcaag
gtgaccacgctggtcggtgcaggtggactccccaggtatggcactctttctgataactct
gttaatggccagatgattgattgtgaggaatttctcaggaaaggcattcgctatgtgcac
actgccaccaccaaatcccccaacagggattacataccaatgctagtagaagttcaagac
aataacggcaacactatacagcaggagcatttccaaataatggttagaattaaggaagga
gcagaaaacacgcctcccaaagccagctttacagctatgatgatgatggaggtcgatcag
tttgtgatgacagccataactcctgatatgctggcaggcgaagacgtggagtcagattct
gatgacttaatctttaatataacatctcccttaggctatcaacagggctatatcatcagc
acggatgatcagaacctgccaataacctccttttaccaaagagatgtgaaagatctgaaa
attgcttataaaccaccatccgaagattcagaaatagaaagaatcttccagatcgagttt
gagatagtcgatactgatggagctgtgtcagaaacattcgcgttcatgatcgttgtaaag
ccgatgaacactttagcgccagtcgctaccaaaaatacaggccagctactatttgagggt
cagtctaggcctttgtctacttcacagaacttggaaatcagtgacgaggacaatcttgaa
gatgtaagaatctctgtaactgatggtttgaagcatggtgagctgactgtgttggggtct
caacgaaaatatttcaccccagctgatcttgacgctggaattgttgtgtatcagcatgat
gggagtgatacctacagtgacaatattatattcagaatgactgatggcactaatgaggtg
gagtttttgtttcctatcacaattgcccctactgatgacgagccccccattattaacgcc
aacactggcattgtgcttttcaagaatgaaatgatgcagatctcaccatttatcttgagt
gcgactgacatcgactcagaagactcaaccattaagtttatcttagaggaaccatattca
accattggtgaactcctgcttaggcaagtggagccccctgcagatctgtccgcttggaag
tttagtgcaacagatgaaatgtttgaacaggtggtcacgtattggtttcagcaggacatt
ctagacggaaagctgttttaccgccacaaaggaccccacagcaccaccactgtcattgac
cactttgtgttcagagtccaggatgacaatgaccccccaaatcagtctggagaacataca
ttcaccattaaaatccatcctgttgatgacatacccccaactctgtacccaggcacttct
ctgcacatgactgttcaagaatatgaactaacattctttaaaaagaagttcctacgctac
acagacctggactgcgatgacagggacctcaaatataccatcgtcaaggcccccacagat
acagacgagaacaacccagttcttcttggagccattgtacttactgacagccctgacact
gttgtgtcagagtttactcaagctcaggtcaaccaccataaaatagcatacaaacctcct
gaccaagagctgggtatcactcccaaagttgtccagttcacctttactgtagaggacaca
gccagcaactcagttgatggcctgtttacgatatttttacagcctgttgacaacaagcct
cctgtgatcaccaacactggcttcactgtgctggagagaagcaccttcataatatccaag
aatgaactggatgcctctgatcaggacacagaggaggaacatattatattcaaggtcatc
cagattccaaggtacgggcaactacaatatttggaaattgatatgtccaatggcgagaca
tttgttttagaagacattgagagtggtcgactcacctatacccatggtggggaagaatct
ctgactgatgtaatcaaaattgaggttagcgatggcttccatgaagtgcccatagttatc
aagattagcattaagccagttgatgatgagactccaaccatcatgctaccatcaggtctc
ctgggggcttccattgatgtgcttgagaatggagctacagaaatcactagcaatgtgatt
cagggtaaagacgaggacacggacgacctcatgcttacatttattgtagaagagtctcca
aaactgggagaaatcatggtcaatggcgctcctgctgaacgctttacccaacaagacatt
atcaatggggtagtcgtctacgtccacacaagtggagagattggccctattaaagagcac
gattccttcaacctcaccatctctgacatgtcagacgagtgggtcgttggtggcaacaaa
gtccaaggtgttcgtgtccatgttaccatccttcctgtagacagtattgccccaatcgtt
agtgttggggaacagtttgttgtagttgaaggagaaaagaatgtcattaccttagatcat
atcaaaactgaagacattgacactgataatgatgatatcctctgcaccattattgtccag
tcaacttctggctatgtggagaacatttctccagcccctggatcagagaaatcaagagca
ggcactgctattactgcctttaccattaaagatgttagtctaggtcacatctactacgtc
cagagcattcacaaaggtgtggaaccagtagaggacaggttcaccttccgttgttctgat
ggtattaacttctccgagaggcatttcttccccattgtcatcatcccatccaatgatgag
aaaccagaaattttcatccgagagtttgtcgtcatggaaggcatgagcttagtcattgac
agccccatcttaaatgctgcagatgcagacgttccaagtgatgagcttgagtttgagatc
attacaaaccccaaacatggcagcatcgtccagcagttgagcactggcactgttccggta
gtaaaattctccttggagcagatcaaggaagcatctaatatagtttacgagcatgatgac
tctgagaccaaggaagatgagtttaaaattagactcacagatggcaaacacactgttgaa
gagaaagttctgataatggtaattcctgttgacgacgagaccccaagaatggcgatcaat
gatggactggaggtcgaaattggagaaaccaaagtcattagcaagaaagttctcaaagcc
acagatctggactctgaagacaaagagcttacctacattgtccgctatggtcctggtcaa
ggctaccttcagcgaatcaccaaacatggagatgttattgggaacatcagcattgggatg
aactttacccaagatgaacttgacaagcagttgatccagtacgtccacactggccaggag
ggtgttcgtgatctgctcaagtttgatgtcactgatggtatcaaccccctcattgatcgc
tacttctatatcaacattggaagcattgatatggtcttccctgatgtcattaacaaaggt
gtgaccctcaaagaaggaggcaaagtgaccttgactacagacctccttagcactactgac
atcaacagccctgatgaatacctcagttttagcatcacacgagccccaagcaggggtcat
ctcgagtgcactgaccttcctggcgtgcccatctccaccttcacccagttacaacttgca
ggcaacaaagtctactacatccacacctctgatgatgaagtgaagatggacagctttgag
tttgaggtgacagatggctacaatccagtgtttcgcacattccgggtgtccatcactgac
gtggacaacaagaaaccagtcttgaccatcaacaacctggtggtgggagagggtgaaatc
aaactgatcactccttttgagctgactgtggaggatcgagacactccagataaccttctg
cgcttcgtggttacccaggtgcctgtgcacggtcagctgttgtacaacggcactcaagcc
attacgacattcaccaagcaagacctcaacgagaacctcattagctacaagcacgacagc
acagagaccagtgaagacagcttctcattcacggtcaccgatggaactcataccgacttc
tacgtgttccctgacacagtctatgagacacggaaaccgcagatgatgatcatccaaatc
aacacagtggacaatggcgtacctcaaatcgtggtcaacaaagctgcacccaccctcagg
gtcctacataccggccatcttggatttgtaatcaccagtaaagctctgaaggctgaggac
agagacagccctaataaggttttgaagtataccgtcgctgaagctcctctgcatggcttc
atcatcaatactgagttggggaacaacagcatcaagaccttctcacaagctgatatcgat
gagatgaaaatctgctatgtgttactcgatacatccaatgctacaagtgatatcttctac
ttcacagttgaagacaacgggggcaacaagctgaagccccagccgttccgcctgaactgg
gcctggatctctctggagaaggagttttatctggtggatgaggacgcaaagtttctggag
gtgacgctcaaacgcagaggctacctgggggagacatcgtttgtcagcatcggcactaag
gacggcactgccaagacggacaaggactttcgtggaaaagcccagaagcaggtccagttt
aacccaggccagaccacggccacctggagggtgaagatcttcactgatctagagtttgaa
acttcagaaaccttcgagattcagctctcagaacctgtgatggcagtacttgagtaccca
gacaaagccactgtggagattgtggaccctggagatgagtccaccgtgttcatccctcag
gctgagtttctgatagaggaggacatcggtgagctgctggttcctgtacgcaggtctgga
gatgcgagtcaggagcttatggtcgtctgttacacacagcaagacactgcgaccggcacc
atccccagcacggtgctctcctactccgactacatcacccgacccgaagatcacaccagt
gtcctgcgcttcgacaaggacgagcgggagaagctgtgcagaatcatcatcatcgacgac
tcgctgtatgaggaggaggagagctttaatgtgtcactgagcatgcccatgggaggccag
gtgggggccagcttccccagtgccaaggtggttatcctggcagacagtgatgatgagccg
tcgctgtatttcggagagacagagtacaccgtggacgagagttcaggttatgtggaggtg
agagtgtggaggacgggtactgacctctctaaaaccgctaccgtcaccgtgcgctccaga
aagagtgaacccgtctctgcagaagcgggtctggattatgtgggcatcagtcgtaacttg
gacttcgcgcccggcgtcaccatgcagacgttccgcgtgactatcctggatgacctgggt
cgccctgagctggaaggaccagagaagtttgagctggtgttgcgtatgcccatgaacgct
gtgctgggagagcccagcaagaccgtcatcaccattaatgacaccgtgactgaccttccc
agggtgcagttcagggaggcggagtacaaggtggacgaggctgatggtcagatcaaagcc
atgatttaccgcagtggagacatcagcaagaagtccactgtgcgctgctacactcgccaa
ggctccgcccaggtcatgatggactacaacgagaggcccaacaccgacgcctccatcgtc
accttcctaccaggtgaaaacgagaagccgtgtgtggtgaccttggtggatgactctatc
catgaggaggacgaggaattccgactggttttgggaacgcccaagagcaagactccatac
ggagctgcactgggagagcagaaggaaactttggtcaccatcgctgacagaaaagacaag
tccatcataaggttctctgagattaagtacagtgtgaaggaaccacaggctcccggggag
atcgccgtggtgaagatccccgtcctccgcctgggagacacctccaaggtttctgtggtg
agggttcacactaaagacggctctgcaacctctggagaggattacaaccccctatcacaa
gacgtggagtttaaggaaggcgagacggaacacgtggtggaggtgcaggttctgtatgat
ggacagagggagatccgggaagccttcaccgtccatctgaagcccgacgagtacatggtg
gccgagacacagatgagtaaagctatagtgtatatcgaggagatggacagtgtagctgac
gtcaccttcccagcagtccctcaggtggtgtctctgctcatgtatgatgatacgattcgg
gtaaaggagcacccgcaccctccaactgggtacccggtagtgtgtgtgacggcctgcaac
cccaaatattcagagttcgacaagactggctccatctgcgcagtggagaacattaacgac
actctcactcagtaccgctggctcgtcagcgcccccagtgggccagacggcgtcaccagc
cctatgcgtgaggtggacaccaacaccttcttcaccaacaccaagtccatcacgctggac
tccatctacttccaggcgggttcacgggtacagtgtgctgccagggcctttaacgccaac
ggagacgcaggcctggagctcagctcttctattgtgatcatcagccgagaagagggtctt
tgtcagccccgtattgctggtactgttggagcagaacccttctcagcgaaaatccgctac
actggtccagacgacccagactaccccaacctcatcaaactcaccatcactatgccacac
atggacggcatgctgccagtaatctccacccgtcccctctctaacttcgagctgaccctg
agtccggatggaactcgggtggggaaccatcgctgctccaacctgctggacttcaacgag
atccagacaggccacggcttcatcacagatgccaccaagaacccagagatcatcggagag
acgtctccgtaccagtacagcgtggccatgcggagcgccaactctctgcgcttctaccgc
aacctcaacctggaggcctgtctgtgggagttcagcagctactacgacatgtccgagctg
ctcaacaaatgtgggggatccatcgggacagatggacaggtgctgaacctggtccagtcc
tacgttaccctgcgggttccactcttcgtctcttacgtgttccactcacctgtagctgtt
gggggctggcagcactttgacctgcagtctgagctgcgtctcacttttgtatacgacact
gccatcttgtggcaggatggcattggcagcccacctgaggctgaactacaaggtgccatg
tatcctaccagtatgaggataaacgaggagggtcgtctggttgtgaattttaagacggag
gctcggttccgtgggcagttcgtcatgtctcacccaggaagcagcctgtcgtccatggtg
atttgtgcggatcaccctgggcttaccttcactctcgctctgatccgaaccgagcccacg
tacaaccaaccaatgcagcaatggagcttcgtctctgactttgctgttcgggactactcc
ggcacctacacagtgaagctgattccctgcagcgcgtctcctaatggagagttcagtatt
ccacctgtgtgccaccccagagagcccctcaccttcgacatggacatccgcttccagcag
gtgagtgatcctgtagcggcagagttcagtctgaacacacagatgttcctgctgtcaaag
aaggaggtgtggctgtctgacggctcgatgggctttggggagggcacagatgccgccttc
tctgagggttccactatctatggccgggttatggtggatccggtgcagaacctgggagat
tcgttctcctgcagcattgagaaggtcttcctctgcactggcacagacggttatgtaccc
aagtataatcccaccaataaagagtacggctgcctggctgatgccccttcactgctctac
agatttaagatcctggataaagcccagccggagactcaggccacagcatttggagatgtc
cagtttgacgcctcgtttgccatggacactcctggggcctttacactggtccgacagccg
gggacagatgggttcacgctgtcctcgtccccactgttccaggttgctgccgggcgggag
tggttcattcacaccatatacaccctccgctccagagacaatgccaaccgggtcattggt
aagaggagcctggagtaccaccatggcatttcctcagtcctccccgactctggagccctg
actcgccaccgccgtgccgtgcccgaccccgaagctctagacatcggtgcagagaacaac
cgcggcaccaacatccagcacatcgccctggaccgctctgaccgcctgagagtgagccag
cagcagccgtggggccgcgagacctacgtggagcgccccctagtggagggcagcgcaagc
aaagagcctggctctgactcagctctgccagctggcatgcccacgctgctgggggtgtcc
ggcctcatcctgctggtgtgtctggtggtgattctagtggtgctcttggtccggcgtaag
aggaaagagaaggagtacccgccgtacgccacctcctcctgctcggcctatagcagcgcc
aacagccgacagaccaccagcacgagacacagtggagacagttctgaagtttag
DBGET
integrated database retrieval system
