Astyanax mexicanus (Mexican tetra): 103022593
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Entry
103022593 CDS
T05042
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X2
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04210
Apoptosis
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103022593 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103022593 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103022593 (sptan1)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103022593 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
103022593 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
103022593
NCBI-ProteinID:
XP_007233972
Ensembl:
ENSAMXG00000010528
LinkDB
All DBs
Position
17:38753090..38793405
Genome browser
AA seq
2501 aa
AA seq
DB search
MDISGVKVLETADDIQERRQQVLDRYRRFKELSAMRRQKLEDSYRFQFFRRDADELEKWI
QEKLQIASDESYKDPTNLQGKLQKHQAFEAEVQANSGAIIKLDETGNLMISESHFASETI
RTRLEELHRLWDLLLQKTKEKGVRLLQAQKLVQYLRECEDALDWITDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQAAAKLTQENHPEAELILKKQEEVNAAWQRL
KGLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGEAERLQQTHPQNASQIHLKRDELITNWEQIRTLAAERHAHLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKAT
DEAGQALLNTGHYASEEVKEKLGILTEEKESLLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELIDGKHYASGEVATRMDEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVARYEALKEPMAARKQKL
CDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVTQKGEAMVEEGHFAGEDVKAKLGELNNRWDTLKGKATQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIHALKEQAQACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEQGSIGLRQEQIENQTMVTKEVCSVSVRMKQVEELYGTLLELG
EKRKDMLEKSCKKFMLFREANELQQWINEKEGALTNEEVGSDLEQVEVLQKKFDDFQKDL
KANESRLRDINKVASELESEGLMAEEAPLVQAQQQEMLGSAPGKDEADSKSASPWKSIRM
AVQTTANFNTIKELNNRWRALQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALN
TDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTEL
NTAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEAL
LERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDRERADLEKAWVQR
RMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQ
EEKIAALQSFADQLISADHYAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFS
RDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDT
GNALIQRGACAGSEDAVKSRLVALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDF
WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMASNAFDT
SQVKDKRDAVNGRFGKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDY
GRDLTGVQNLRKKHKRLEAELGAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVEHW
KELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKH
EAFETDFTVHRDRVSDVCANGDELIKKENHHVDNITAKMKALRGKVSELERAAAQRKAKL
DENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEG
ITNITALKDQLLAAKHVQSKAIEARHATLMKRWNQLLSNSAARKKKLLEAQEHFRKVEDL
FLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHDAFRSSLSSAEADFNQLAE
LDRQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQ
HANAFHQWLQETRTYLLDGIAYRRVIRVYQYEVDDDLSGRSCMVEESGTLESQLEATKRK
HQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQ
IQARNTTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEF
ESILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSAENKPYVTKEELYQ
NLTKEQADYCISHMKPYLDSKGRELPSAFDFVEFTRSLFVN
NT seq
7506 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagtggagtgaaagtcctggagacggccgatgacatccaggagcgacggcag
caggtccttgaccgctaccgtcgctttaaggagttgtcggccatgcgcaggcagaaactg
gaggactcctaccgattccagttcttccgccgtgacgctgatgagttggagaagtggatt
caggagaagctgcagatcgcctcagacgagagctacaaggatccaactaacctgcaggga
aagcttcagaaacatcaagcctttgaagcagaagtacaggccaactctggtgccatcatc
aagctggacgagactggcaatctcatgatctctgagagccactttgcatctgagaccatc
cgaactcgtttagaggaactgcatcgtctctgggatctgctgctgcagaagaccaaggag
aagggagtgcgactgctgcaggcccagaaactagtgcagtacctgcgggagtgtgaagat
gccctggactggatcactgacaaggaagctatcgtcacctctgaggagctggggcaggac
ctggaacatgtggaagttctgcagaagaagtttgaggagttccagacagacttggcagcc
catgaggagcgtgtgaatgaggtgaaccaggctgcagccaagcttactcaggagaaccac
cccgaagctgagctcatcctaaagaagcaggaggaggttaatgcagcctggcagagactg
aagggcttggctcagcagaggcagggaaaactgttcggagctgctgaggtgcagcgcttc
aaccgagatgtggatgaaacgatcagctggataaaggagaaagagcagctgatggcctca
gatgattttggacgtgacctggccagtgttcaggctctgctgcgcaaacatgaggggctt
gagagagaccttgcagccctggaagacaaggtaaacactttgggtggagaggcagagcgt
ctgcagcaaacccacccccagaatgcctctcagatccacctgaagagagatgagctcatc
accaactgggagcagatccgcacgctggctgctgaacgccacgcccacctcaacgactct
tacagactgcagcgcttcactgcagatttcagggaccttaccagctgggttactgagatg
aaggctctgattaatgctgatgagctggccaacgatgtggctggggctgaagccctgctt
gaccgtcaccaggaacacaagggtgagattgatgcccacgaagacagcttcaaagccaca
gatgaggctggacaggctctcctgaacaccggacactacgcctcagaggaggtcaaggag
aagctgggtattcttactgaggagaaggagtctctgttggagctgtgggagcttcgaaga
cagcagtatgagcagtgcatggacctgcagctcttttatagggacactgagcaggttgac
aactggatgagcaagcaggaggccttccttctcaacgaggacctaggcgactctttggac
agcgtagaggccttgctgaagaagcatgaagactttgagaaatcccttagtgcccaggag
gagaagataactgccctggatgaatttgctaccaagctgatccagaacaaccactatgcc
aaggaagatgttgccacccgcagagacgcattgctgagcagacgcaacgctcttcatgag
cgcgctcagtcccgccgtgctgccctagaggactccttccacctgcagcagttcttccgt
gattctgacgagcttaagagctggatcaacgagaagatgaagaccgccactgatgaagcc
tacaaggatccctctaacctgcagggtaaagtacagaaacaccaggcctttgaggcagag
ctttctgccaaccagagccgcattgatgcactgcagaagtctggccaggagctgattgat
ggaaagcattacgcttctggtgaggtggctacacgcatggatgaggtcagctcccaatgg
aagaaacttctggaagctactgagctcaaaggaattaagctgcgtgaagccaaccagcag
cagcagtttaaccgtaatgtagaggatattgagctgtggctctacgaagtggaaggccat
ctggcatctgatgactatggcaaagacctgaccagtgttcagaacttgcagaagaagcat
gctttgctggaggctgatgtagctgcccatcaggaccgtattgacggcattaccatccag
gccaggcagttccaagaggctggccacttcgatgctgataacatccggaagaaacaggag
gctctggtggcacgctatgaagctttgaaggagcctatggccgcacgcaagcagaagctg
tgcgactctctgcggctgcagcagctcttccgcgatgtggaggatgaagagacctggatc
agagagaaggaacctattgctgcctccactaacaggggtaaagacctgattggggtacag
aacctgctgaagaaacaccaggctttgcaggctgagatctctggtcatgagccccgcatc
aaggctgtaactcagaaaggcgaggccatggtggaggagggccactttgctggtgaggat
gtgaaggctaaactgggagagctgaacaatcgctgggatactctgaagggaaaggcaacc
cagcgcaggcaggacctggaggactccttgcaggcccagcagtactttgcagatgccaac
gaggctgagtcctggatgagggagaaggagccaattgtaggcagccctgactatggaaag
gatgaggactctgctgaggccctgctgaagaaacacgaggcgctgatgtctgatctgagt
gcctatggcagcagcatacatgccctgaaggagcaggctcaggcatgcaggcaacaagtg
gcccccactgacgatgagaccggtaaggagctggtgctggctctttatgactaccaggag
aagagtcctcgtgaggtcaccatgaagaagggagacatcctcacactgctcaacagcact
aacaaggactggtggaaggtggaggtgaatgacaggcagggctttgtgccagcagcctac
gttaagaaactggatccaacacagtcgtcctcccgtgagaaccttctggatgaacagggc
agcattggtctccgccaggagcagattgagaaccagactatggtcaccaaggaggtgtgc
agtgtgtctgtgcgcatgaagcaggtggaggagctgtacggcaccctgctggaactgggt
gagaagaggaaggatatgctggagaagagctgcaagaagttcatgctattccgtgaagcc
aatgagctgcagcagtggataaatgagaaggagggagctctgactaatgaggaggtgggc
tctgacttggagcaagtggaggtgttacagaagaagtttgatgatttccagaaggattta
aaggcaaatgagtctcgtctacgcgacatcaacaaggtggcatcagagctggagtctgag
ggtctgatggctgaggaggctccattagtacaggctcagcaacaagagatgctgggctct
gctcctggcaaggatgaagctgattcgaaatctgcctctccatggaagtccattcgcatg
gctgtccaaacgacggctaactttaataccattaaggagttgaacaaccgctggagagcc
ctgcagcagctggctgaggatagaagcaacatgctgggaagtgcccatgaagtccagcgg
ttccacagagatgctgatgagactaaagagtggatcgaggaaaagaaccaagcgctgaac
accgacaactacggccacgacctggccagcgttcaggctctgcagcgcaaacacgagggc
ttcgagagagatctggctgccctcggagacaaggtgaactccctgggcgagacggcagaa
cgtctgatccagtcgcatcctgaggcagtggacgacatccaggagaagtgcaccgagctg
aacacggcctggagcagcctggtaggccgcgcagaccagcgcaaagacaaactgggcaac
tcgcacgatctgcagcgcttcctcagtgacttcagagatttgatgtcctggattaatgga
attcgaggacttgtgtcttctgatgagctggccaaggatgtgactggagctgaagccctg
ctggagagacaccaggaacaccgcactgaaattgatgcccgtgcgggcaccttccaggcc
tttgagcagtttggacagcagcttttagcccgtggtcactacgccagtcctgagatccag
cagaaactggaggctctggaccgtgagcgggctgacctggagaaggcctgggtgcagcgt
agaatgatgctggaccagtgcttggagcttcagctgtttaaccgtgactgtgagcaggcg
gagaactggatggcagcgagagaggcctttttggccagtgatgacaagggtgactccctg
gatagcgtagaggctctcatcaagaaacatgaagactttgacaaagccatcaatgtgcag
gaggagaagattgctgcactgcagtcctttgctgaccagctcatttctgctgaccattat
gccaagcctgaaatcttcaaccgccgcaacgaggtcttggacaggtggcggcgcctgaaa
gctcagatgattgagaaacgctccaaactgggcgagtctcagactctgcagcagttcagc
agagatgtggatgagatcgaggcatggatcagcgagaaactgcagacggccactgacgag
tcttacaaagatcctaccaacatccagctgtccaagctgctgagcaaacaccaaaagcac
caggcttttgaagccgagcttcacgccaatgctgacagaatccgtggggtgatcgataca
ggcaacgcactcatccagagaggtgcgtgcgctggaagtgaagatgccgtcaagtctcgt
ctggttgctctggatgagcagtggcagttcctggttaacaagtctgctgagaagagtcag
aagctcaaggaagccaacaagcagcagaactttaacaccggcatcaaagactttgacttt
tggttgtcagaggtggaagctcttcttgcttctgaggattacggaaaagatctggcctca
gtcaacaacctgctgaagaagcaccagctgctggaggctgatatctctgcacatgaggat
cgtctgaaggacctgaatggccaggctgacagcctgatggccagcaacgccttcgacacc
tctcaggtcaaagacaaacgggacgccgttaatggtcgctttggcaaaatcaagagcatg
gctgcgggacgtcgtgccaagctgaacgagtctcatcgcctgcaccagttcttcagggac
ctggatgatgaagaatcttggatcaaagagaaaaagttgttagtaagttcggaggattat
ggacgtgatttgacaggagtacagaatctgagaaagaaacacaagagactggaggctgag
ctgggagctcacgagccagccattcagtctgtgctagacactgggaagaagctgtccgat
gacaacaccatcgggcaggaggagatccagcagaggctggctcagtttgtggagcactgg
aaggagctgaaggatctagctgctgccagggggcagaggcttgaagagtcgctggaatat
cagcagtttgtagcaaatgtggaggaagaggaagcctggattaatgagaagctgaatctg
gttggaagtgaggactatggtgatactttggcagctgtgcagggcttgttgaagaagcac
gaagcttttgagactgactttactgtgcatagggaccgtgtgagcgatgtatgtgccaac
ggagatgagcttatcaagaaggagaaccaccacgtggacaacatcacagccaaaatgaag
gcccttcgtggaaaagtgtctgagctggagagggccgcagcccagaggaaagccaagctg
gacgaaaactctgctttcctgcagttcaactggaaggctgatgtggtggagtcctggatc
ggtgagaaagagaacagcctgaagactgatgactatggacgcgacctttcttcagtacag
accctgctcaccaagcaggaaacgtttgatgctggccttcaggcgttccagcaggaagga
atcaccaacatcaccgccctgaaggaccagctcctggcagccaagcatgtgcagtccaaa
gccatcgaggctcgtcatgccacgctgatgaagcgttggaatcagctgctttccaactct
gctgcccgcaagaagaaactgctggaggctcaggagcacttcagaaaggttgaagatttg
ttcttgacatttgccaagaaagcttcagccttcaacagctggtttgagaatgcagaggag
gatctgaccgacccggtgaggtgcaactccctggaggagatcagggcgctgagggaggcc
cacgatgctttccgctcctcactcagctctgcagaggctgacttcaaccagctggccgag
ctcgaccgacagatcaaaagctaccaggtggtgtccaacccatacacctggttcaccatg
gaggctctggaggagacctggaggaacctgcagaagatcatcaaggagcgggagctggag
ctgcagaaggagcagaggaggcaggaggagaacgataagctaagacaggagtttgctcag
catgctaatgcattccaccagtggctgcaggagaccaggacatatctactggatggcata
gcctatcggcgggttatccgtgtgtatcagtatgaagtcgatgatgatctttctggaagg
tcctgcatggtggaagagtctggaactctagaatcccagctggaggctacaaagcgtaag
caccaggagatccgggccatgcgcagccagctgaagaaaatcgaggatctgggagcagcc
atggaggaggcactgatcctagacaacaaatacacagagcacagcacggtgggactggcc
cagcagtgggaccagctcgaccagctgggcatgaggatgcaacacaacctggaacaacag
atccaagccagaaacactacaggagtaacagaggaggctctaaaggagttcagcatgatg
ttcaagcacttcgacaaagagaaatctggtcgtctgaaccaccaagaattcaagtcctgc
ttgcgctctttgggctacgacctgcccatggtggaggaaggagaacccgacccggagttt
gagtccatcctcgacacggtggatcccaacagggacggcaatgtgtccttgcaggagtac
atggcgttcatgatcagtcgtgagacagagaacgtgaaatccagtgaagagatcgagagt
gccttccgtgctctcagcgctgagaacaagccgtacgtcaccaaggaagaactctaccag
aatctaaccaaggagcaggcagactactgcatttcccacatgaagccctacctagacagc
aagggccgggagctcccgtcggcgttcgacttcgtggaattcactcgctcgctttttgtc
aactga
DBGET
integrated database retrieval system
