Astyanax mexicanus (Mexican tetra): 103022597
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Entry
103022597 CDS
T05042
Symbol
sema3ga
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga
KO
K06840
semaphorin 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_3
Ig_2
ig
I-set
ATR1_N
Motif
Other DBs
NCBI-GeneID:
103022597
NCBI-ProteinID:
XP_022535079
Ensembl:
ENSAMXG00000000186
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Position
12:complement(42335171..42387154)
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AA seq
758 aa
AA seq
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MGTKLLLVLLLLLTLLCVCGVNCMLRSAPRVTLAFKELMDTRAARPFSFSFNTSDYRILH
MDQDQGRLYLGSREYLVSLDMQNVNKEPLIIHWPAPAQRKGECQMTGKGQHGECANFVRL
IEPWNRTHLYACGTGAYKPICTFINRGWRAEDYLFRLVPGYVDSGKGKCSYDPNHENVAA
LINGNLYSGVHVDFMGTDPAIFRTMGSRPAVRTEQYDSRWLNEPVFVQIKQIPDSSERND
DKLYFFFREKSQDSGGSASPGMLARVGRVCLNDEGGQKSLVNKWTTFLKARLVCSVMGDD
GVETFFDELRDVFIQPTQDERNPMVYAVFSTAGSVFKGSAVCVYSMADIRNVFNGPFAHK
HGHNYQWTAYTGKIPYPRPGTCPGGTFTPGLRSTKEFSDEAVNFIRNHPLMHHPVYPIHK
RPLVVRSGVDYRFTTITVDQVDAVDGRYEVFFLGTDRGTVQKVIVLPKDPTTMEELTLEE
VEVFRSPSPVKTMRISAKRQQLYVSSDAGLTQVSLHRCGVYGKACSDCCLARDPYCAWDG
ENCAPFTQATKRRSRRQDVKHGDPLRQCRGFNAKVEKRLKETVQFGVEGSSTFLECVPRS
PQATVKWLYQKEGRRKVLNRDREVLKTPQGILLKALTHSDAGLYHCLATENNFKHTLARV
SLRILDRDIAVALTVPDEDEEELNKRHQKPQLQNPPHQLHPAAAPPANSALPLEPEMRLI
HQYCQSYWEQLTTAGQAEEQQVKRTSRRHTEGQEPSGG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaaactcctcctggtgctgctgctgctgctgacactgctgtgtgtgtgtggt
gtgaactgtatgctgcgctcagcccccagagtcactctagcttttaaagagcttatggac
actcgggcagcaagaccattcagcttctccttcaacaccagtgactaccgcatcctccac
atggaccaggaccagggccggctctacctggggagcagggagtacctggtctctctggac
atgcagaacgtcaacaaggaacctcttattatccactggccagcaccagcacagagaaag
ggggagtgccagatgactgggaaaggacagcatggtgagtgtgccaactttgtacgcctg
attgaaccgtggaacagaacacacctgtatgcatgtggcactggagcttacaaacccatc
tgcaccttcatcaacagaggctggagagctgaggactacctcttcaggctggtccctggg
tatgtggactccggaaagggcaagtgctcctacgaccccaatcatgaaaacgtggcggct
ctcatcaatgggaacctgtactctggggtgcacgtggactttatgggcacagatccggcc
atctttaggaccatggggagcagaccagctgtgaggacagagcagtatgactccaggtgg
cttaatgaacctgtgttcgttcagataaagcagattccagacagctctgagagaaacgac
gataagctctactttttctttcgggagaagagtcaggactctggaggctctgcaagcccc
ggcatgctggctagagtggggcgagtgtgtctgaatgatgagggaggccagaagtcttta
gtgaacaagtggacgacatttctgaaagccaggctggtgtgctcagtgatgggtgatgac
ggcgtggagaccttcttcgatgagctgagagatgtgtttattcagcccacccaggacgag
aggaaccccatggtttacgcggttttctccactgctgggtctgtgtttaaggggtcagcg
gtgtgtgtgtactctatggctgatatccgtaacgtctttaatgggccttttgcccacaaa
catggacacaactaccagtggacggcgtacacagggaagattccctaccctcgacctgga
acttgtcctggaggcacgtttacaccaggcctgcgctctacaaaggagttctcagacgag
gctgtgaacttcatccgtaaccatcccctcatgcaccaccctgtgtatcctatacacaag
cgccctctagtggtgcgctcaggcgtggactaccgcttcaccaccatcaccgtggaccag
gtggatgctgtggatgggagatatgaggtgttttttctgggcacagatcgaggaacagtc
cagaaagtcatagttctgcccaaagatcccaccaccatggaagagctgacattagaagaa
gtggaagtgttcaggtcaccttcccctgttaaaacaatgaggatatctgctaaaaggcaa
cagctgtatgtatcgtcagatgcgggtctgacccaggtgtctctgcatcgttgtggggtg
tatggtaaggcctgctctgactgctgcctggctcgagacccttactgtgcctgggatgga
gaaaactgtgcccccttcacacaggccaccaaaaggcggagcaggaggcaggatgtgaag
catggtgacccgttacgccagtgcagaggcttcaatgctaaagtggagaagaggctgaag
gagacggtgcagttcggggtggagggcagcagcacgtttttagagtgtgtaccgcgctct
cctcaggctactgtcaaatggctctatcagaaagagggaagaagaaaagtgctgaaccgg
gacagggaggtcctgaagacccctcagggcattctgctgaaggccctcacccactcggac
gcaggactctaccactgcctggccaccgagaacaacttcaagcacacactggcccgggtc
tccctgcgcatcctggaccgggacatcgccgtggccctcaccgtaccggacgaggacgag
gaggagctgaataagaggcatcagaaacctcagcttcagaatcctcctcatcagctgcat
cctgctgctgctcctcctgctaactccgccctgccactggagccggagatgcgcctgatc
caccagtactgccagtcctactgggagcagctcaccaccgcaggacaagccgaggagcag
caggtcaaacgcaccagccgcagacacacagagggccaggagcccagcggaggctga
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