Astyanax mexicanus (Mexican tetra): 103022621
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Entry
103022621 CDS
T05042
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
amex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103022621 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103022621 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103022621 (zgc:136908)
03009 Ribosome biogenesis [BR:
amex03009
]
103022621 (zgc:136908)
04131 Membrane trafficking [BR:
amex04131
]
103022621 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103022621 (zgc:136908)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103022621 (zgc:136908)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103022621 (zgc:136908)
Membrane trafficking [BR:
amex04131
]
SNARE
SNARE associated proteins
Others
103022621 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103022621 (zgc:136908)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103022621 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_22
AAA_2
TIP49
Vps4_C
AAA_28
RNA_helicase
NPHP3_N
AAA_14
nSTAND3
Mg_chelatase
Parvo_NS1
AAA_17
AAA_18
ATPase_2
IstB_IS21
ATPase
DUF815
AAA_7
ABC_tran
AAA_24
Sigma54_activat
ResIII
TsaE
NACHT
SLFN-g3_helicase
Viral_helicase1
NB-ARC
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
103022621
NCBI-ProteinID:
XP_022518973
Ensembl:
ENSAMXG00000019442
LinkDB
All DBs
Position
21:complement(36711927..36730194)
Genome browser
AA seq
805 aa
AA seq
DB search
MPATGANDPKAEDFSTAILKQKSRPNRLIVDEANNEDNSIVCLSQVKMEELQLFRGDTVV
MRGRKRRQTVCIVLTDDTCGDERIRMNRVTRNNLRVRLGDVISINACPDVKYGKRIHVLP
IDDTIEGLTGNLFEVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVAP
DTIIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRVHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLADDVDLERIATDTHGHVGADLAALCSEA
ALQAIRKKMTLIDLEDETIDADLLNSLAVTMDDFRWALSQSNPSALRETVVEVPQVNWED
IGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILR
ANLRKSPVAKEVDLPYLSRITEGFSGADLTEICQRACKLAIREAIEAEIRAERERQSRKG
TAMDDDYDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSSSQ
SGGGQGSGQGSGGHYREDGDDDLYQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccaccggagctaatgatccgaaggcggaggatttctccacagctatactaaag
cagaagagcagaccgaacaggctgatagtagacgaagccaacaatgaggacaacagcatc
gtctgcctctctcaggtgaagatggaggagctgcagttgtttcgcggggacacggtggtg
atgcgcggtcgtaaacggcgtcagaccgtctgcatcgtcctcacagacgacacctgcgga
gacgagcgcatacgcatgaaccgcgtcacacgcaacaacctgcgcgtgcgcctcggagac
gtcatcagtatcaacgcctgtcctgatgttaagtatgggaagcgtattcatgttttgccg
attgacgacaccatcgagggactgaccgggaacctttttgaggttttcctgaagccctat
ttcctggaggcctacagacccgtccacaaaggtgatatatttctagttagaggaggaatg
agggcagtagagtttaaggttgtggaaacagaccccaccccccactgtatcgtcgcccca
gataccatcatccactgcgagggcgaacccatcaaacgagaggacgaggaggagagtctg
aatgatattgggtatgatgacatcggcggctgtcgtaaacagttggctcagattaaggag
atggtggagcttcctctccgacaccccggcctcttcaaagccatcggagtgaagcccccg
cgagggattctcctgtatggaccccctggaaccgggaagactctagtggcccgagccgtc
gctaacgagacgggagcgttcttcttccttatcaatggtccagagatcatgagtaaactg
gcgggagaatcggagagtaatctgaggaaggctttcgaggaggctgagaagaacgctccc
gccattatcttcatcgacgagctggacgccatcgctcccaaacgagagaagactcatggg
gaggtggagcgccgaatcgtgtctcagctcttgaccctgatggacggactgaagcagagg
gttcacgtggtcgtgatggcggctaccaaccgacccaacagtgtggacccggctttacgc
cgtttcggtcgttttgatcgtgagattgatatcgggattccggactctacgggtcggctg
gagattctccagattcacaccaagaacatgaagctggctgatgatgtggatctggagagg
atcgctacagatactcatggtcatgtgggagctgatctggcggcgctgtgctctgaagca
gctcttcaggccatccggaagaaaatgaccctgatcgatctggaggacgaaaccatcgac
gccgacctgctcaactccctcgccgtcaccatggacgacttcaggtgggctctgagtcag
agtaacccctcggctctgagggagacggtggtggaggttcctcaggtgaactgggaggac
atcgggggtctggacgaggtgaagcgggagctgcaggaactcgtacagtaccctgtggag
taccctgataagttcctgaagttcgggatgaccccgtccagaggggtgctgttctacggg
ccgcccggctgcgggaaaacactgctggccaaagccatcgccaacgagtgccaggccaac
ttcgtctccattaaaggtccggagctcctcaccatgtggtttggagagtctgaggctaat
gtgagagatgtgtttgataaggctcgccaggccgctccatgtatcctcttctttgacgag
ttggactccatcgctaagtccagagggggcggagccggggacgcggggggtgcggccgat
cgggtcatcaaccaaatcctcacagagatggacggaatgaccaataagaagaacgtcttc
atcatcggcgccaccaacaggcctgatataattgatccggcgattttgcgtccgggtcgt
ttggatcagctgatctatattcctctgccggacatgccgtcccgcaccgccatcctcaga
gccaacctccgcaaatcacctgtggctaaagaggtggacctgccgtacctgtcccggatc
actgagggtttctcgggagctgatctgacggagatctgccagagagcctgtaaactcgcc
atccgagaagctatcgaagccgagatccgcgcagagagagagagacagagcaggaagggc
actgccatggatgatgattatgatcctgttcctgagatcaggaaggaccactttgaggag
gctatgagattcgcccgtcgctctgtaagcgacaacgacattcgcaaatatgaaatgttc
gctcagactctgcagcagagccgcggtttcggaaacttcaggtttccctccagttctcag
tcaggtggaggacagggatcaggtcagggttctgggggtcactacagagaagatggagat
gatgacctctatcaataa
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integrated database retrieval system
