Astyanax mexicanus (Mexican tetra): 103022694
Help
Entry
103022694 CDS
T05042
Symbol
cthrc1a
Name
(RefSeq) collagen triple helix repeat-containing protein 1a isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103022694 (cthrc1a)
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103022694 (cthrc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
103022694
NCBI-ProteinID:
XP_007254743
Ensembl:
ENSAMXG00000005349
UniProt:
A0A8B9JXT5
LinkDB
All DBs
Position
3:33561403..33579175
Genome browser
AA seq
228 aa
AA seq
DB search
MSALLLLCVWTVAPFCFCEKARERTARQRDADFTEKYNSCLQGPPGMQGRDGNPGINGIP
GTPGIPGRDGMKGEKGECVTERFEEPWKPNFKQCAWSSLNYGIDLGKIAECTFTKLKSDS
ALRVLFSGSLRLKCKSACCQRWYFTFNGAECSGPLPIESIIYLDQGSPELNSTINIHRTS
TVEGLCEGVTAGLVDVGIWVGTCADYPRGDASTGWNSVSRVIIEELPK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctgctgctgctgtgtgtttggactgttgcacctttctgtttttgtgagaaa
gctagagagaggacagctcgacagagagatgcagacttcacggaaaagtacaattcctgc
ctgcagggtcctcctggaatgcagggaagggatggtaatccgggcattaatggcattccg
ggcaccccagggattccaggtcgggatggtatgaagggggagaagggcgagtgtgtgact
gaaagatttgaagaaccgtggaaacccaatttcaaacagtgcgcctggagctctctcaac
tacggcatcgacctcggaaaaatagcagagtgtacgttcactaagctgaagtcagacagt
gctctgagagtgctcttcagtggttctctcaggctgaagtgtaagtcggcctgctgtcag
cgctggtacttcacctttaacggtgcggagtgttcagggcctttacccatcgagtctata
atctacctggatcagggcagccccgagctcaactctaccatcaacattcacaggacgtct
acagtggaggggttgtgcgagggcgtaaccgcaggcctggttgacgtgggcatatgggtg
ggcacctgtgcggattacccccgcggcgatgcctccacagggtggaattcggtgtccaga
gtgattatcgaggagcttcccaaatga
DBGET
integrated database retrieval system
