Astyanax mexicanus (Mexican tetra): 103022777
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Entry
103022777 CDS
T05042
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103022777 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103022777 (gspt1)
03012 Translation factors [BR:
amex03012
]
103022777 (gspt1)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103022777 (gspt1)
Translation factors [BR:
amex03012
]
Eukaryotic type
Release factors
103022777 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
LPD34
Motif
Other DBs
NCBI-GeneID:
103022777
NCBI-ProteinID:
XP_022524946
Ensembl:
ENSAMXG00000008638
LinkDB
All DBs
Position
15:23698280..23711103
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AA seq
563 aa
AA seq
DB search
MDSRDTAPDSWEQEDDVEAPDTELQSAFTGLNVNAPEFVPSFIPRGNAGSAGQDGTDAVA
HMEISEPAAAVENGETDASTAETWEEKGEPDEVEPGGGPMEECGALGDEAQDEMMEEDEE
MPVPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEK
NRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQA
DLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYEE
CKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPSDLCPWYTGLPFIPHLDSLPNFNR
SSDGPLRLPIVDKYRDMGTVVLGKLESGTISKAQQLIMMPNRHTVEVLSLLSDEVETDDA
GPGENLKLRLKGIEEEEILPGFILCNPENLCHSGRTFDAQIVIIEHKSIICPGYNAVLHI
HTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMGR
FTLRDEGKTIAIGKVLKLVPEKE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggactccagagacacagccccggatagctgggagcaggaggacgatgtggaggccccg
gacacggagctgcagtccgccttcaccggcctgaacgtcaacgctcctgagttcgtccct
tccttcatccccagaggaaacgctggaagcgctgggcaagacggtacagatgcagttgca
cacatggagatttcggaaccagcagctgctgtggagaacggagagactgatgccagcaca
gcggagacatgggaagagaagggggagccagatgaggtggagcctggaggcggacccatg
gaagaatgtggagctcttggggatgaggcccaagatgaaatgatggaggaggatgaagaa
atgcctgttcccaaactgcctcctcctcccccagatgcccccaaaaaggagcatgttaat
gtggtgttcattggacacgtggatgcaggaaagtcaaccattggtggtcagataatgtat
ttgacaggaatggtggaaaaaaggaccctggagaaatatgaaagggaagcgaaggagaag
aacagagaaacatggtatctctcctgggcattagacacaaaccaggaggagagagacaaa
gggaagactgtggaagtaggaagagcctattttgaaacagagaaaaagcactttaccatc
ctggacgctcccggccataaaagctttgtacccaacatgatcggtggtgcctcacaggct
gacttggcagtgctggttatctctgcccgaaaaggggagtttgagacaggctttgaaaag
ggaggtcagacccgtgagcatgctatgctggccaaaactgctggagtcaaacacctgata
gttctcatcaacaaaatggacgaccctactgtgaactggagcttggatagatatgaagaa
tgtaaagaaaaattagtgccatttctaaagaaagtgggctttaacccaaagaaagacatc
cacttcatgccctgctctgggctaactggagccaacttaaaggaaccttcagatctctgt
ccctggtacacggggctaccatttattccacatctggacagcttgccaaacttcaacaga
tcaagtgatggtcctctcagattgcccattgtagataagtacagggacatgggcactgtg
gtccttggaaaactggaatcaggaactataagcaaagcacaacaactcatcatgatgcca
aataggcacactgtggaggtgctgagcctgctgtctgatgaagtagagacggacgatgca
gggcctggagaaaacctgaaactgcgcctcaaaggcattgaagaggaggagattctgcct
ggctttatcctatgcaatcctgaaaacctttgccactcagggcgcacgtttgatgcacag
attgtcattattgaacacaaatccattatatgtccaggttacaacgcagtcctacacatc
catacctgcatagaggaagtgcagataacggccttaatctgtctggtggacaagaagacg
ggagagaagagcaagacacgccctcgttttgtcaaacaagaccaagtatgcattgcccgt
ctcagagcggcgggaaccatctgcttagagacgtttaaagacttcccacagatgggtcgg
ttcactctgagggatgaaggtaaaactattgctattggcaaggtgttgaagttggtacca
gagaaggagtaa
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