Astyanax mexicanus (Mexican tetra): 103022855
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Entry
103022855 CDS
T05042
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 isoform X1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103022855
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
103022855
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
103022855
NCBI-ProteinID:
XP_022532269
Ensembl:
ENSAMXG00000008425
LinkDB
All DBs
Position
17:43491466..43675196
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AA seq
944 aa
AA seq
DB search
MEEGMMKSNSFSSNREEKAEADGRNSVFQRQDSALLKKNSTGGGGGGGGGGGGGSSGSNA
ANAAASAGKEHANSVAVKTDREETMLGLEDADPAGRSHGFMQRQIGAMLQPGVNKFSLRM
FGSQKAVEKEQERVQTAGYWIIHPYSDFRFYWDLIMLIMMMGNLIIIPVGITFFSEQTTT
TWLVFNVASDTIFLVDLVMNFRTGIVNEESSEIILDPKVIKMNYLKSWFVVDFLSSIPVD
YIFLIVEKGFDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS
AVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNGMVNDSWGKQYSYALFKAM
SHMLCIGYGARAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQ
VEQYMSFHKLPADMRQKIHDYYEHRYQGKIFDEDNILNELNDPLKEEIVNFNCRKLVATM
PLFANADPNFVTGMLSKLKFEVFQPNDYIIREGTVGKKMYFIQHGVASVITKHNKEMKLT
DGSYFGEICLLTKGRRTASVRADTYCRLFSLSVDHFNEVLEEYPMMRRAFETVAIDRLDR
IGKKNSLLLQKFQKDLNAGVFNTQENELLKQIIRQDREMVMMVERKQSVTGANSTPMSGN
SIINSPAQPPFINFANSQFQQAAPMTYSTAASITPAARIAQGVLFSASGISPGNLGTSSP
NPQTPLQQPSGIKSPCSFTAAVCSPPVQTPLSSRTFQYGSPTASQLSLVQPTIPQQSLAA
QQQQQQQQQQLPSSQQPQPQQASPQRSEIHKSTQALQSGSLSRDIRHLSASQPSLPHETS
LAVRPHPSSGESLAAIQPPAATAQVQAQIQAQVPVVQAVPQSGIRTTVPQRVALFRQMSS
GSLPPVRAAPSSLQHRDSTASRRESAVLSSTETDQDKMRFASNL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcatgatgaagtccaactcgttctccagcaacagggaggagaaggcggag
gcggacggccggaacagcgtgtttcagcggcaggactcggcgctgctgaagaagaacagc
accggaggaggaggcggtggaggaggcggaggaggcggtggcagcagcggcagtaacgcc
gccaacgccgccgcctccgccggcaaggagcacgccaactccgtggcggtgaagacggac
cgcgaggagaccatgctggggctggaggacgccgaccccgcgggccggtcgcacggcttc
atgcagcggcagatcggggccatgctgcagcccggagtcaacaagttctccctgcgcatg
ttcggcagccagaaggcggtggagaaggagcaggagcgcgtgcagaccgcgggctactgg
atcatccacccctacagcgacttcaggttctactgggacttgataatgctcatcatgatg
atggggaatctaatcatcattcctgttggaataaccttcttttctgagcaaaccaccacc
acctggctggtgtttaacgtggcctcggacaccatcttcctggtggacctggtcatgaac
tttcgcacgggcattgtgaacgaggagagctccgagatcatcctggaccctaaggtcatt
aagatgaactacctgaagagctggtttgtggtggatttcctctcctccatccccgtggat
tatatctttctgattgtcgagaaaggctttgactcggaggtgtacaaaacggcccgagcg
ctgcgaatcgtccgcttcaccaaaatcctcagcctgctccgcctgctgcggctgtcccgc
ctcatcagatacatccaccagtgggaggagattttccacatgacctatgacctggcgagt
gcagtggtacgaatctttaatctgattggtatgatgctgctgctgtgtcactgggacggc
tgcctgcagttcctggtgcctctgctccaggatttccctccggattgctgggtgtcgtta
aacggtatggttaacgactcctggggaaagcagtactcgtacgccctctttaaagccatg
agtcacatgctgtgtatcggttatggagctcgagcgcccgtcagcatgtccgatctgtgg
atcaccatgctcagcatgatcgtgggggccacctgctacgccatgttcgtgggccacgcc
accgccctcatccagtccctggactcctcgcgacgccagtatcaagagaagtataaacaa
gtggagcagtacatgtccttccacaagctcccagccgacatgcggcagaagatccacgac
tattacgagcatcgctaccagggcaagatcttcgatgaggataacatcctgaacgagctt
aacgaccctttaaaagaggagattgttaacttcaactgccgtaagctggtggccaccatg
cctctgttcgccaacgccgaccccaactttgtgacgggaatgctgagcaagctcaagttc
gaggtgttccagcccaacgattacatcatccgcgagggaactgtgggtaaaaagatgtac
ttcatccagcacggcgtcgccagcgtcatcaccaagcacaacaaggagatgaagctcaca
gacggctcctatttcggagaaatctgtctactaacgaaaggccggcgcacggccagcgtc
cgcgccgacacgtactgccgcctcttctccctgtctgtcgaccacttcaacgaggtcctg
gaggaataccccatgatgcggcgcgcgttcgagacggtggctattgaccgcctggaccgc
atcgggaagaagaactcacttctactgcagaagttccagaaggatctgaacgctggcgtg
ttcaacacgcaggagaacgagctgctgaagcagatcatccggcaggaccgggagatggtt
atgatggtcgaaaggaagcagtcggtaacgggggccaactcgacaccgatgtctggaaac
tccatcattaactctcctgctcagccgccgttcattaacttcgccaacagccagttccag
caagccgcccccatgacctacagcaccgccgcgtccatcaccccggccgcccgcatagct
cagggcgtcctgttctccgcatccggcatttcacctggaaacctgggtacctcctccccg
aacccgcagaccccactgcagcagccgagcggcatcaagtcgccctgttccttcacggcg
gccgtttgcagccctccggtccagacgcctttatccagccgaacgttccagtacggctcg
cccaccgcctcccagctttccctggtacagccgaccattcctcagcagtccttagcagca
cagcagcagcagcagcaacaacaacagcagctgccatcttcccaacagcctcagcctcaa
caggcttctccccaaagaagcgaaatccacaaaagcacgcaggcgctccagtccggaagc
cttagccgagacattcgccacctctcagcctcccagccctctttaccccacgaaacctcg
ctagccgtccggccgcacccatcctccggcgaatctctggccgccatccagccccctgca
gccacagcccaggtccaggcccaaatccaggcccaagttccagtggtccaggccgtccct
caaagcggcatccgcaccactgtccctcagagggtggcgctcttccgccagatgtcgtcg
ggatctttaccgccggtgcgcgccgcgccctctagcctccagcacagggattccacggcg
tccagacgagaatcggcggtcttgagcagtacagagaccgatcaagacaagatgcgattc
gcatcgaatttatga
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