Astyanax mexicanus (Mexican tetra): 103022896
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Entry
103022896 CDS
T05042
Symbol
stag1b
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103022896 (stag1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103022896 (stag1b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103022896 (stag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Motif
Other DBs
NCBI-GeneID:
103022896
NCBI-ProteinID:
XP_007232723
Ensembl:
ENSAMXG00000003373
UniProt:
A0A3B1IFX2
A0A8T2MG98
LinkDB
All DBs
Position
1:complement(101518980..101547129)
Genome browser
AA seq
1257 aa
AA seq
DB search
MINSEFPVLQDSSNESGQGDTVSLSLSVSELEDTGEGKGKKKRGRPGRQQASNKKARKSP
VDKGGRRPNGMAQQNGEGGDPSTLFEVVKMGKSAMQSVVDDWIESYKQDRDMALLDLINF
FIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTIAGPQWKKFRYNFCEFIG
VLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
QDNTQRQYEAERNKVAGKRATDKLELLLEKRKELQENQDEIENMMNSIFKGIFVHRYRDA
IAEIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQTLYTNRGL
FPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEDALSNEDCENVYHLVYSA
HRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAY
LVDSLWDSSQELLKDWDCMIELLLEEPVQGEEVLGDRHESALIELMVCTIRQAAEAHPPV
GRGTGKRVLTAKEKKTQVDDKNKLTEHFIIALPMLLSKYQADAEKVANLLQIPQYFDLEV
YSSGRMEKHLDALLKQIRVVVEKHTETEVLEACSKTYSILCSEEYTIMNRVDIARSQLID
ELTDRFSHSVEDLLQEGDEADDDDIYNVLSSLKKLTAFHNAHDLTKWDLFKNCYRLLKMG
IEQGSMPEQIAVQALQCSHYSILWQLVRITEGSPSKDDLVALRRVVKSFLAVCQQCLSNV
NTPVKEQAFMLLCDLLMIFSHQLTTGSREALQPLVFNPDNTLQSELLTFVLDHVFIDQDD
ENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYNDYGDI
IKETLSKTRQTDKIQCAKTLILSLQQLFNELVQDQGPNLDRTSSHVSGIKELARRFALTF
GLDQIKTREAVATLHKDGIDFAFKFPNPKGAEYPPPNLAFLEVLCEFSSKLLRQDKKTVH
SYLEKFMTEYMMERREDVWLPLIAYRNSLLTGGDEDRMSVTTGSTTSRASTVRSKRGRPP
LHKKRPDADESVDGSWVMRNDTIQTPGGLQTPQLTSTVLRENPRQAAEHIPEQDSSEPGS
EPDYIHNPQMQMSWLDQQKIEDVNRKERGGMNYMKARSGGVRQQVRGLMEDDAEPIFEDV
MMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSTAIIEDDSGFGMQMF
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgattaactcagagttccctgttttacaggactcctctaatgagtctgggcagggagac
actgtgagcctgagcctgagtgtcagtgagctggaggacactggagagggaaaaggcaaa
aagaagagaggaaggccaggaagacagcaagcgtccaataagaaggcccgcaaatctccg
gttgacaaggggggaaggaggcctaatggcatggcccagcagaatggagaaggtggggac
cctagcacactgtttgaggtggtcaaaatgggcaagagtgctatgcagtcagtcgttgat
gactggattgaatcgtacaagcaggatagagatatggctcttctggatttgatcaacttc
ttcattcagtgctcggggtgtaaaggtacggttagaattgagatgttcagaaacatgcag
aatgcagaaattattagaaagatgactgaggagtttgacgaggatagcggggactaccct
ctcacaatagctggcccacagtggaagaagttccgctacaacttctgcgagtttattggc
gttctgatccgtcagtgtcagtacagcatcatctatgatgagtacatgatggacacagtc
atttccctcctcaccggcctttcagactcacaggtccgagccttcagacacaccagcaca
ctcgcagctatgaagcttatgacagccctggtgaacgtagcactgaacctgagcatcaac
caggacaacacacagagacagtacgaagctgagcgcaacaaggttgctgggaaaagagcc
acagataagctagaactgctgctggagaaaaggaaagagcttcaagagaaccaagatgag
attgagaacatgatgaactctatcttcaagggtattttcgttcaccgctacagagatgct
attgctgagatcagagctatctgcattgaggagattggtgtgtggatgaagctgtacagt
gatgccttcctgaatgacagctatttgaagtatgtgggctggacattgcacgataggcaa
ggagaagtccgactcaagtgcctcaaagcacttcagacactgtacacaaacagagggctc
ttccccaagctagagctcttcacgaatcgctttaaggaccgcattgtgtctatgacacta
gataaagagtacgatgtggcagtggaggccatccggctagtgactctgatactgcatggc
agtgaggacgccctctctaatgaagactgtgaaaacgtctaccacctggtctactccgcc
catcgtcccgtggctgtggcagcaggagagttccttcacaggaagctgtttagtagacac
gacccccaggcagaggaggctctcgctaagcggcggggcaggaatagccctaatggcaac
ctcatcaggatgctggtgcttttcttccttgaaagtgagttgcacgagcatgcagcgtat
ctggtagacagcctgtgggacagctcgcaggagctgcttaaggactgggactgcatgatc
gagcttctgctggaggaacctgtacagggagaagaagtgctgggagacaggcatgagagc
gctctgattgagctcatggtctgcaccatcaggcaggctgccgaggctcacccacctgtc
ggccgaggaacagggaagagggttctcaccgccaaagaaaagaagacccaggttgacgat
aagaataaactcactgagcacttcatcattgctcttccaatgctactgtccaagtatcaa
gcagatgctgaaaaagtagccaacctcctgcagatcccacagtattttgacctggaggtc
tacagctctgggcgaatggagaagcacttagacgccctgctgaagcaaatccgggtggtg
gtggagaaacatacggagacggaggtactggaagcctgcagtaagacctacagcattttg
tgcagtgaagagtacaccatcatgaaccgcgtggacatcgcccgcagccagcttattgat
gagctcacagatcgctttagccactctgtggaggacctgctgcaagagggggatgaggct
gatgatgatgacatctacaatgtcctctcatctctaaagaaactcactgctttccataat
gctcatgacctcacaaaatgggacttatttaagaactgctaccggttactgaagatggga
atagaacaagggtccatgccagagcagattgctgttcaggctctccagtgttcacattac
tcaatcctgtggcagctggtccggatcacagagggatctccgtccaaggatgaccttgtt
gccctaagaagagttgtgaagtcgttcctagctgtgtgccagcagtgcctgtcaaatgta
aacactcctgtgaaagagcaggccttcatgttgctttgtgacctgctgatgatcttcagc
caccagctaacaacaggaagcagagaagccctgcagccattggtcttcaacccggacaac
accctgcagagtgagctcctcacctttgtcctggaccacgtcttcatcgaccaggatgac
gagaaccagagcatggagggtgatgaggaagatgaagcaaataaaattgaggctttgcac
aagaggaggaatctgctagcagctttcagcaagcttatcatatatgacattgtggacatg
cctgcagcagctgacatctttaaacactatatgaagtactacaatgactacggagacatc
atcaaagaaacactgagcaagacaagacagacagacaagatccagtgtgccaaaacgctt
atactcagtttgcaacagctctttaatgagcttgtgcaggatcaggggcctaatctggac
cgaacctcttctcacgtgagtggcattaaagagctggcccgccgcttcgctctcactttt
ggactggaccagatcaaaaccagggaggcagtagcaacgttgcacaaggatggaattgat
tttgccttcaagttccccaaccccaaaggagcagagtatcctcccccaaacttggctttt
ctggaagtgctgtgcgagttctcttccaagctactccggcaggataaaaagactgtgcac
tcgtacttggagaagttcatgacggaatacatgatggagcggagagaggacgtgtggcta
ccactgatcgcctacaggaactctttgctaacaggaggagatgaggaccgtatgtccgtc
acaacaggcagcaccaccagcagagccagcacagtacgcagcaagagaggacgaccgcca
ctgcacaagaaacgtccagacgcagacgaaagtgttgacggctcatgggtaatgcgcaac
gacaccattcagacacctggaggtctgcagacaccacagcttacttccacagtgctaaga
gagaacccacgacaagcagcagaacacatcccagagcaagactcctcagagcctggctca
gaacctgactacattcacaatccacagatgcagatgtcatggcttgaccagcagaagata
gaggacgtgaacagaaaagagcggggcggcatgaactatatgaaggcgcggagcggaggc
gtaaggcaacaagtacgtggcttaatggaagatgacgcagagcccatcttcgaggacgtg
atgatgtcatcgcgtggccagttggaggacatgaacgaggagtttgaagatactatggtg
atagatctgccaccatcaagaaacagacgagagagagctgaactcagaccggactttttt
gactctacggcaattatagaagatgattctggatttggtatgcagatgttttga
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