Astyanax mexicanus (Mexican tetra): 103022931
Help
Entry
103022931 CDS
T05042
Symbol
samd1b
Name
(RefSeq) sterile alpha motif domain-containing protein 1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103022931 (samd1b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
103022931 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
BSP_II
SAM_PNT
DNA_pol_phi
DUF3824
Motif
Other DBs
NCBI-GeneID:
103022931
NCBI-ProteinID:
XP_007238162
UniProt:
A0A8T2KYG7
LinkDB
All DBs
Position
21:complement(36732616..36740676)
Genome browser
AA seq
648 aa
AA seq
DB search
MSNLRYRDWILDTIDSLRSRKARPDLERICRMVRRRHGSDPERTRAELERLIQERAVLKV
SYKGSTSYRNAARVQRKGRRTTADQTTDSTDNNKLELSLRDRERSNSGGSSSSGSNGNGD
SSSCNGNDEQSSNNNNQSTSGSTHAEREPTRSCGKSLCKSCTSICTCTSTSTSARAPSVA
PATPDPRREQTSCSEKQQQHCVLVKSECGGGVKHGGGGFTGTCDGRDGADAGADVGACST
RVDGGKQGAGSSISKSAAVNGGGSHAPLGPREVLGCLSAHEQLETLTRHRARALESSTGS
RNSSRRRKRRMMMVVVEMKKKSRTTEASAAAAAAARALGQAGSRLCKAMKRRKRMKGGGG
ARDDQSKDEEKDDETMETESEEEEDAEEEVEEEQEKMEGDDLSPVCHQTTKTEEGSPGVP
GLNPGPLSSLEKKSSNVDQRVMMSAENLQPLLLAASSSLSSSPSPSSPSRQDADSECGRV
NQVATVGTGDLQEEERSATPNQLQFNTQTLSVMVTDSVRIPSSIPIKTYSGCKTEVGMSS
CLLTPSASPGAAEERGMNGGMFVKTESSVVNPVDWTVSDVANYFTAVGFPEQALAFRTQE
IDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQRTHFQDDGAFC
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacttgcggtaccgcgactggatcctggacacgatagactcgctgcgctcgcgg
aaagcgcgcccggacctggagcggatctgccggatggtgcggcggcggcacggatcggac
cccgagcgcacgcgcgccgagctcgagcggctcatccaggagcgggcggtgctgaaagtc
agttacaaggggtccacctcctaccggaacgcagccagggtgcagcgcaagggccggagg
actaccgccgaccagaccaccgacagcacggacaacaacaagctcgagctgtctttgcgc
gaccgcgagcgcagcaacagcggcggcagcagcagtagcggtagtaacggtaacggtgac
tctagtagctgtaacggcaatgacgaacaaagcagcaacaacaacaaccagagcacgagc
ggaagcacgcacgcggagcgagagccgaccaggagttgcggaaagtcgttgtgcaagagt
tgcacgagcatctgcacctgcacaagcacaagcacgagcgcccgcgctccaagtgtcgca
cccgcaaccccggacccccggcgcgagcaaacttcctgcagtgagaagcagcagcagcac
tgcgtgctcgttaagtctgaatgtggtggtggtgttaaacatggtggaggtggtttcact
ggtacatgtgatggtagagatggtgcagatgcaggtgcagatgttggtgcttgttctact
cgtgtcgatggtggtaaacaaggtgcaggtagttctattagtaaaagtgctgctgtcaat
ggtggtggtagtcacgcgccgctgggacctagggaggtcctgggctgcctgagcgcgcac
gagcagctcgagacgctgacgaggcaccgcgcgcgagcgctggagagcagcacgggcagc
aggaacagcagcaggaggaggaagaggaggatgatgatggtggtggtggagatgaagaag
aagagcaggacaacggaggcatcagctgctgctgctgctgcagcgcgtgcgctcgggcag
gccggctcgcgactgtgtaaggcgatgaagaggaggaagaggatgaagggtggaggaggt
gcgcgggacgatcagagcaaggacgaggagaaggatgacgagactatggagacagagagt
gaggaagaagaggatgcagaggaagaagtggaggaagagcaagagaaaatggaaggggac
gatttgtctccagtttgccaccagaccaccaaaaccgaagaaggttcaccaggggtcccg
ggtctgaaccctggtccactttcatcactggagaagaagtccagtaatgttgaccaaaga
gtgatgatgtcagcggaaaacctccagcctctgttgttggcggcatcatcttcgttgtct
tcatccccatcaccatcatcaccgtcaagacaggatgcggacagtgaatgtgggagggtg
aaccaggtggcaactgttggcacaggagatttgcaagaggaggaaagatcagccacacca
aaccaactacagttcaacacacagactctgtcggttatggtgacagacagtgtgaggatt
ccgtcttctattcctattaaaacttattcaggctgtaagacagaggtgggcatgtcttca
tgcttgctcactccctccgcctctccgggagcagctgaggaacgagggatgaacggagga
atgtttgtgaagacggagtcttcagtagtgaatccagtggattggacagtatcagatgta
gccaattattttacagctgtgggatttccagagcaggctctcgctttcagaacacaggaa
atagatgggaagtccctcctcctgatgcagcgcaacgatgtgctgaccggcctgtcaatc
agactaggccccgccctcaagatttacgagcgccacgtgaaggttttgcagaggacccat
tttcaggacgacggcgctttctgctga
DBGET
integrated database retrieval system
