Astyanax mexicanus (Mexican tetra): 103022934
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Entry
103022934 CDS
T05042
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103022934 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103022934 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
103022934 (pdlim2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
103022934
NCBI-ProteinID:
XP_007260206
Ensembl:
ENSAMXG00000032208
UniProt:
A0A8B9KWS9
A0A3B1JT09
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All DBs
Position
12:22095105..22178178
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AA seq
369 aa
AA seq
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MMAFTVNLIGPSPWGFRISGGRDFKKAITVSKVNPGSKAELACLQPGDIILEINGENTGD
MLNVEAQNKIKNCKTQLQLQVDRPALPSPGQTNGINTTEQLVGRFQEAVQVSRDENQNYR
EYSISSPASLSPGPYSPEPPSSPDRKGERITPTSNKSLQLRSWSPEEKNTSYRLSRPLSQ
EFSSMDFRSNSVSSRTPTPPGRYSPHSPIERELSVSPRRSSDFAMQRFDRDSEVYKMIQE
NKESRTAPRQSNTFKMLQEVLEADEKEAALRFPGKLSPSPPKPVVSSSVAGVQKYHTCEK
CGTNIVTQAVKIIDDRYRHPECYTCTDCGLNLKMRGHFWVGNEMFCEKHARERYQGPGAG
YRHPISPHH
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatggctttcactgtgaacctgattggcccatctccctggggcttcagaatatctggc
gggcgggatttcaagaaggcaataacagtctcaaaggtaaaccctggcagtaaagcagag
ctcgcttgtctccaacctggggacatcattctggaaataaatggagaaaacactggtgac
atgctgaatgtggaggcacagaacaaaatcaagaactgcaagacacagctgcagctgcag
gtggacagaccagcccttcccagtcctggacagaccaacgggatcaataccacagagcag
ctggtgggccgttttcaagaggctgtgcaagttagtcgggatgagaaccagaactacaga
gaatattcaatctccagtccagcatcactctctccaggcccatattcaccagagcctccc
tccagccctgaccgtaaaggagaaaggatcacacccaccagcaacaagagcctgcagctc
cgttcctggtccccagaagaaaagaacaccagttacagactgtctaggccactttctcag
gagttttcctcgatggattttcgcagcaactctgtgtccagtcggaccccaacccctcct
ggacgatactctccacacagtccaatcgaacgggagctttctgtgtccccccgccgcagc
tcggacttcgcaatgcagaggtttgaccgagactcggaggtgtacaagatgattcaggag
aataaggagtcacgcactgcccctcgacagtcgaacacctttaaaatgctgcaggaggtg
ctggaggctgacgagaaagaggctgccctcaggtttccagggaaactgtcaccaagcccc
cccaagccagtggtgtcgtcttctgttgccggggtgcagaaataccacacctgtgaaaaa
tgtggcactaacattgtcacccaggcggtgaagatcatcgacgatcgttaccgtcaccca
gaatgctacacgtgcacagactgcggcctaaacctgaaaatgcgtggtcacttctgggtg
ggaaatgagatgttctgtgagaaacacgcccgcgagcgctaccaggggccgggggccggc
tatcgccaccccatctcccctcaccactga
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