Astyanax mexicanus (Mexican tetra): 103023001
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Entry
103023001 CDS
T05042
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03410
Base excision repair
amex04210
Apoptosis
amex04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103023001 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103023001 (parp1)
04217 Necroptosis
103023001 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103023001 (parp1)
03036 Chromosome and associated proteins [BR:
amex03036
]
103023001 (parp1)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103023001 (parp1)
Enzymes [BR:
amex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
103023001 (parp1)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103023001 (parp1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
103023001 (parp1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103023001 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
103023001
NCBI-ProteinID:
XP_007253978
Ensembl:
ENSAMXG00000006465
UniProt:
A0A8B9LAF0
LinkDB
All DBs
Position
1:complement(79667977..79683235)
Genome browser
AA seq
1021 aa
AA seq
DB search
MADAQDDKRYKAEYAKSGRASCKKCKDNIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWH
RAAVQATSDISGFTDLRWEDQEKVKKAIEGGGAPGAKSDQKGAAKGEKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTSCFVSRREELVFKPEYSAAQ
LKGFAALRAEDKDELKKRLPAVKTEGKRKADSVDGEGAAKKQKKEAEEEKQLQQQLKEQS
QLVWGIKDKLKKYCSTNDMKELLIANDQEVPSGESNVLDRLSDCMAFGALKPCETCQGQI
VFKSDAYYCTGDISAWTKCNVRTQTPNRKDWVTPKEFHEVPFLKKFKFKRQDRLFPKEAP
APPAVPASTATTAAATSSTSRAPIETPTEVPADKPLTGLKVLTVGKLSKNKDELKAAVEE
LGGKITGTVNKAVFCLSTKKEVEKMSKKMEEVRDAGVRVVSEDFLSDIKSSGKALQELIS
LHGISPWGAEVKLEGPAPAPSGASKSTGAMSSKSSGRSNEEEGSSKSKKMKLTVKGGAAV
DPDSGLGNCAHVLDQNGKIHSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVG
TTIGGNKLDKFYDKNSAMDNFRSVYEEKTGNSWTSSSFTKYPNKFYPLEIDYGQDEEAVK
KLAASSGTKSQLAKPIQELIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLL
SEVQQAVSDNAPEPMILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQTKVQMLDNLLDIEV
AYSLLRGGAEDNKKDPIDINYEKLKTKIEVLDNSSEEAQLIHQYVKNTHASTHNTYTLEV
EEIFKIDREGEYQRYRPFKELPNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGK
GVYFADMVSKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGR
TAPDQGATVSLKGVDIPLGKGVNTNIDDTSLLYNEYIVYDVAQVNLKYLLKIRFNYQSSL
W
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcgcaggacgacaagcggtacaaagctgaatatgcgaagagcgggcgagcc
tcctgtaagaaatgcaaggacaacatcgctaaggactctctgaggatggccatcatggtg
cagtcgcccatgtttgatggaaaagttccacactggcatcatttctcctgcttttggcat
cgagctgcagtgcaggcgacctcagacatatctggctttaccgatctccgctgggaggac
caggagaaggtgaaaaaagcgattgaaggtggaggcgctcctggagcaaaaagtgatcag
aaaggagccgctaaaggagagaagacgcttaatgactttgcagtggaatatgctaaatcc
aacagaagcacctgcaagggctgcgatcagaaaattgagaaggatcagattcgtgtgtca
aagaaaacagtggaccccgaaaagcctcagttgggcctaatcgatcgctggtaccacaca
agttgctttgtgagccggcgtgaggagctggtctttaaacctgagtacagtgcagctcag
cttaaaggctttgctgccctacgagccgaggacaaggacgagctgaagaaacgactgcct
gctgttaagactgaagggaaaagaaaggcggacagtgtggatggagaaggagccgccaaa
aaacaaaagaaagaggcagaggaggagaagcagctgcagcagcagctgaaggaacagagc
cagttggtttggggaattaaagacaagttgaagaagtactgttcgaccaatgatatgaag
gagcttctcattgctaatgaccaggaagttccctcaggagagtccaatgtgttggaccgt
ctatcagactgcatggcttttggggccttaaagccgtgtgagacctgccagggtcagatt
gtgtttaagagtgatgcctactactgcacaggagacatctctgcttggactaaatgtaac
gttaggactcagacccccaaccgcaaggactgggtgactcctaaggagttccatgaagtt
ccctttttgaagaagtttaagtttaagcgccaggatcgacttttccccaaagaggctcca
gctcctcctgcagttcctgcctccactgctactactgctgctgcaacctccagcacctcc
agagcacccattgagactcccactgaagtgcctgcagataagcctctgactggactgaag
gtgctgactgtgggaaagctgagtaagaataaagatgagctgaaggctgcagtggaggaa
ctgggagggaagattactggcacagtcaataaagctgttttctgtctcagcactaagaag
gaggtagaaaagatgagtaagaagatggaggaggtgagagacgctggggtgcgggtagtg
tctgaagatttcctcagcgatattaagtcctcaggcaaagccctgcaggagctcatctcc
ctgcatggtatctcgccctggggagcggaggttaaattggagggtccagctccagcccca
tcaggagcttctaagtcaactggagccatgtcctcaaagagcagtgggaggagcaacgag
gaagaaggtagtagcaagtcaaagaagatgaagttgactgttaaaggtggagctgcagtc
gacccagactcaggtttggggaactgcgctcatgttttggatcagaatggcaagatccac
agtgctactctgggtctagtggacattgtcagaggcaccaactcttactacaaactccag
ctgctggaggacgacgtccagaaacggtactgggtgttcaggtcatggggacgagtggga
accactatcggtggaaacaaactggataagttttatgacaagaactctgccatggacaac
ttccgaagcgtgtatgaagaaaagacaggcaattcatggacctcaagtagcttcactaaa
taccccaacaaattttaccctcttgagattgattatgggcaggatgaggaggcagtgaag
aaactggccgccagctcaggcaccaagtctcaactagctaaaccaatccaagagctcatc
cgaatgatctttgatgtggagagcatgaagaaagccatggtggagtttgagatcgacctg
cagaaaatgcctttgggaaaactgagtaagaggcaaatccagagtgcttattctctcctc
agtgaagttcagcaggctgtttctgacaatgctccagagcctatgatcctggacttgtcc
aaccgcttctacactctgatcccacacgacttcggcatgaagaaacctcccctgttaagt
aacttggactacatccagactaaagttcagatgctggacaatcttctggacattgaagtg
gcctacagcctgttacgtggaggagctgaagataacaaaaaagatcctattgacattaac
tatgagaaactcaaaactaagattgaggttcttgataactcatcagaagaggctcagctg
atccaccagtatgtaaagaacacacatgcttcaactcataatacttacacactcgaagtt
gaagagatcttcaagattgatcgtgagggtgaataccaacgctatcgtcccttcaaagaa
ttgcccaatcggcagctgctgtggcacggctcccgcaccaccaattatgcgggtatccta
tctcagggtctgcgtattgctccacccgaggcgccagtgacaggttatatgtttggcaaa
ggtgtgtactttgctgacatggtatctaagagtgccaattactgccacacttcccaagct
gatcctgtaggcctcattctgttaggagaggttgctctgggcaatatgcatgaactgaaa
aaagcatcacacatcacaaaactacctaaaggaaagcacagtgtgaaaggtttgggaagg
actgctccagatcaaggtgccactgtctctctgaaaggagtggacatcccactgggtaaa
ggagtcaacacaaacattgatgacacaagtctgctctacaacgagtatattgtatacgat
gttgctcaggtgaatctgaaatacctgctgaagattcgctttaattaccaatcatctctc
tggtga
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