Astyanax mexicanus (Mexican tetra): 103023007
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Entry
103023007 CDS
T05042
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103023007 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
amex03029
]
103023007 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103023007 (samm50l)
Mitochondrial biogenesis [BR:
amex03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
103023007 (samm50l)
Transporters [BR:
amex02000
]
Other transporters
Pores ion channels [TC:
1
]
103023007 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-GeneID:
103023007
NCBI-ProteinID:
XP_022527543
Ensembl:
ENSAMXG00000018250
LinkDB
All DBs
Position
2:6034883..6045258
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AA seq
469 aa
AA seq
DB search
MGTVHARSLDPLPMRGRDLGVSTEDLETVEAEQETKKEILENKDVVVQHVNIEGLGRTKE
DYLGYEISDVFNAKNLVDVMRKSHEARQRLLRLGIFKEVEVLIDISEGDDALPNGLDVTF
EVTELKRITGSYNTMVGNNEGSMVLGIKFPNIIGRGEKLTFQFSYGTKETSYGLSFFKPQ
PGYYERNFTLNLYKVTGQFPWSSLKETDRGVSTELNFPLWMTDHTLKWEGVWRELSCLAR
SASFAVREESGHTLKSALSHTMVLDTRNSTILPRKGALLRINQELAGYTGGDASFLKEDF
ELQLNRPFLWGSVLSASLWGGMIFPVGGRPISIADRFYLGGPTSVRGFGMYSIGPQNEGD
FLGGDAYWASGLHLYTPLPFRSTRGGLADLFRTHFFLNAGNLCNLDYGEGPHAHLQKLAE
CIRWSYGAGIILRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggacggtgcacgcgaggagtctggaccccctcccgatgcgcgggcgggacctgggc
gtcagcaccgaggacctggaaaccgtggaggcggagcaagaaaccaagaaagagatccta
gaaaataaagatgttgtggtccagcacgtcaacattgaaggcttaggaagaactaaagag
gattatctgggctatgagatctctgatgtctttaacgctaaaaaccttgtggatgtgatg
aggaaatcacatgaggccaggcagagactgctccgtctgggtatatttaaggaagtggag
gtgctgattgatatttcagaaggagatgatgctctgcctaatggtctggatgtgacgttt
gaggtgacggagttaaagagaatcacaggcagttataacaccatggttggaaacaatgag
ggcagcatggttcttggcatcaagttccccaacattatcggccgtggagagaagctcact
ttccagttctcttacgggactaaagagacttcatatggcttatctttctttaaacctcag
ccaggctactacgaacgcaatttcacgctaaacttatacaaagtgaccggccagttccca
tggagttccctgaaggagactgacagaggagtgtctacagaactcaatttcccactgtgg
atgactgatcacactctgaagtgggagggggtgtggcgggagctgagctgtcttgctcgc
agcgcctcctttgctgtgcgagaggaaagtggccacactctcaaatctgcactttcacac
accatggtgctagacaccaggaactccaccatccttccgagaaaaggtgccttactccgg
atcaaccaggagctagccgggtacacggggggtgatgccagctttctgaaggaggacttt
gagttgcagctgaacagaccattcctctggggctctgtgctctctgcttcactgtgggga
ggaatgatatttcccgttggtggtcggccgatctcaattgctgataggttttacttgggt
ggtccgaccagtgtgagaggatttgggatgtacagtattggtccacagaatgaaggtgac
tttctgggtggagatgcatactgggccagtgggctccacctgtatacaccacttccattc
aggtccacacgaggaggcctagctgacctctttagaactcatttcttcctaaatgctgga
aacctgtgcaacctcgactacggagagggtcctcatgcacacctgcagaagctagcagag
tgcatccgctggtcctatggagcaggcatcatacttcggctgggaaacattgcaagactg
gaactcaattactgcattcccatgggtgtccagagtggagacaggatatgtgacggtgtg
cagtttggggcagggatccgtttcctgtga
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integrated database retrieval system
