Astyanax mexicanus (Mexican tetra): 103023046
Help
Entry
103023046 CDS
T05042
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amex01009
]
103023046
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103023046
Protein phosphatases and associated proteins [BR:
amex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103023046
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103023046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
F-box_5
Motif
Other DBs
NCBI-GeneID:
103023046
NCBI-ProteinID:
XP_022519622
LinkDB
All DBs
Position
11:24163189..24186035
Genome browser
AA seq
918 aa
AA seq
DB search
MVSVPQQPEVAVAQRLASNERPVRTRALKTLKKYINLRSQTGGFCRDDLLKIWKGLFYSL
WMQDKPDLQEELSDRVSLLIHSFHTFNNQLLYFETFLQTMKREWNGIDRLRMDKFFQLVR
FVFRQVFEVLKRSEWESSLVDQFLAVFTAELLQSAVRVPDGLMLHILELYMTELAHVGSA
ELKAEQNLTFIQPFCKTISETKDRSVLSSVCKHIFSTILDHASYAVEELMKELSDGGEDS
GAAEEESEEEEETGRRSLKKVKDRFNGVSGVENDDEDSYYELMDLDNEDLEEDDSDDVGP
VLQFDYGALADCLFELGSRPLTPNFNRNKIYKLVKTFRDLSEGIFPQDDDADAAVKPKGS
KKKKKKGKKSAVQRDDDKSPAKKRKACEVEQTLIEPDQDEEPPSVSIKKKKKKNEGSETE
QSAETPQDGQETEEKSERLAVVVDSETQSQTQDHKGLHSEQECSVRKKGKGKIRKCLDAE
LLEEEDSGSLQTSAPPSVRKKSGKKSKKIQEEGLSPDCSNQTLTDVQQENDLSVSSPVMK
KKKKQKQKSATNDEVVIISETGPDVEILEIQDSNVPSFSETTTFTKKRREGAVSKKKKIK
AKDDVEIITIPEDSSDTASATITTDAADATKLQSDAVSPTPKKRKNKKQKAKELAAQISE
PAEEAVEEPEVAADYKPTGKGHTRTAEEEEAAVPVQTPTRKKKSQKKHKQQLLELTEDVK
EEVQLPDLSEEPVQKKSRKQKQKTEAAAEATEAAVESTTLRKTKKKRKIQADEAETSQIN
GKAGTEDLEISTSVKSKKKLKKASSQSDFASFQSQTAVPTPLFCRAKPKGKSRTGASIQK
TFLKADSKKVTFGLKNNKTTEFRTTDQSLLVSPVGSSRVAFDPEKKPASGVLKSPSASPF
TSLKKATPKKRPTAADFF
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggtaccgcagcagcccgaggtcgcggtcgctcagagactcgcctccaacgag
cgacccgtcagaaccagagccttaaaaaccctgaaaaaatacatcaacctgcgatcacaa
acaggtgggttctgcagggatgacctgctgaagatctggaagggtctgttctactctctg
tggatgcaggacaagccggacctgcaggaggaactgtctgatcgagtatctttactgatt
cacagcttccacactttcaacaaccagcttctctattttgagacgtttcttcagacgatg
aagagggagtggaatgggatagaccgactccgcatggataaattcttccagttggttcgg
tttgtgttcagacaagtctttgaggttctgaagaggagtgagtgggagtccagtttggtg
gatcagtttttagctgtgttcacggctgagctcctgcagagtgctgtacgggttcctgac
ggcctgatgttgcacatcctggagctgtacatgactgagttagctcatgttggttctgca
gagctcaaagctgagcagaaccttactttcatccagcctttctgcaaaaccatcagtgaa
accaaagatcgctcagtgttgagttctgtctgtaaacacatcttctccaccatactggac
catgcttcctacgctgtggaggagctgatgaaggagctgagtgatggaggagaagactcg
ggtgcagcagaggaggagagtgaagaggaagaagaaacaggaaggagatctctgaagaaa
gttaaagaccgattcaacggtgtttcaggcgtggagaacgatgacgaggacagttattat
gaactgatggatttggataatgaagatctggaggaggatgacagtgacgacgtcggtcct
gttttgcagtttgattatggagcgttagcggattgtctgtttgagttgggcagccgtccg
ttaacaccaaacttcaatcgaaataaaatatacaaactggtgaaaacattccgggattta
agtgaaggtatcttccctcaggatgatgatgctgatgctgcagtgaagccgaagggttca
aagaagaaaaagaaaaagggtaaaaagtcagcggtccagagagatgatgataaatctcct
gccaagaagcgcaaagcctgtgaagttgagcagacgttgattgaaccagaccaagatgaa
gaaccaccatcagtaagcatcaagaaaaagaagaagaagaatgagggatcagaaacggag
cagtcagcagaaacgcctcaggatggacaggagacggaggagaagagcgagcggttggct
gttgtggtcgactctgaaactcaatcacagactcaggatcacaagggtttgcacagtgaa
caggagtgcagtgtcagaaagaaggggaaaggcaagatcagaaaatgcctggatgctgag
ttgttggaagaggaagacagtgggtcactacaaaccagtgcgccacctagcgtcaggaaa
aaaagtggcaaaaagagtaaaaagattcaggaagagggtctgagtccagactgcagcaac
caaacgcttacagatgttcagcaggagaatgacctcagtgtttcctctccagtgatgaag
aagaagaagaaacagaagcagaagagtgccacaaatgatgaagtagttatcatatctgaa
accggtcctgatgttgaaatcctggaaatacaggattcaaatgtgccatcattttcagaa
acgacgactttcaccaagaaacgacgtgaaggtgctgtatcaaagaagaagaagataaaa
gctaaagatgacgtagaaataatcactatacctgaggacagcagtgacactgcttcggcc
accatcaccaccgatgcagctgatgcaacaaagctgcagtcagatgctgtttctcccact
cccaagaagagaaagaacaaaaagcagaaagcgaaggaactggcagcacagatcagtgag
cctgccgaagaagcggttgaagaacctgaggtggctgctgattataaacccacaggtaaa
ggtcacacacgcactgctgaggaggaggaagctgctgttccagtgcagacacccacacgg
aaaaagaaaagccagaagaaacataaacagcagttactagagctgactgaagacgtgaag
gaggaggttcagcttccagatctctcagaggagccggtgcagaagaagagtcgcaaacag
aagcagaaaacagaagcagcagcagaagccacagaagcagcagtggaaagtaccacactg
agaaaaactaaaaagaagagaaagatccaggcagacgaagcagaaacatcacagataaat
ggaaaggctggaacagaggatcttgagatttccacttctgtaaagtcaaaaaagaagcta
aagaaggcctcgtcccaatctgactttgcctcctttcagagtcagacagcagttccaact
ccactcttctgtagagctaaacctaaaggcaagtccaggacaggcgcatcaatccaaaag
acattcctgaaggcagattctaaaaaagtcacctttggtctgaagaacaacaaaacaaca
gaattcaggaccacggatcaaagtttgttggtgagtccagtaggctcgtcccgtgtggcc
tttgaccctgagaagaagccagcatccggcgtgctgaagtcaccctcagcatctccattt
actagtctaaaaaaagcaacacccaagaaacgaccaacagctgcagatttcttctaa
DBGET
integrated database retrieval system
