Astyanax mexicanus (Mexican tetra): 103023095
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Entry
103023095 CDS
T05042
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103023095 (rprd1b)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103023095 (rprd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
ALIX_LYPXL_bnd
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
103023095
NCBI-ProteinID:
XP_007233497
Ensembl:
ENSAMXG00000001081
UniProt:
A0A8B9JQZ0
W5K0J1
LinkDB
All DBs
Position
13:complement(14442331..14461465)
Genome browser
AA seq
334 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHASPIVRVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFTRDFEGVLVDACSHVARETDDGCKKHMERLLNIWQERNLYRAD
FIQQLKLAIEDSNSPRQKTPVDDRKGTKRSFQKVQEEEEEEDDDDDDYRAHYSPRETDTN
GPQLTEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKDAADKLSKTVDE
ACLLLAEYNGRLAAELEDRRQLARMLTEYIHSQKEALGEREKKLEEYKQKLARVTQVRKE
LKSHIQSLPDLSLLPSVTGGLAPLPSAGDLFSTD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccttctctgagtctgctctggagaagaagctgtctgagctgagcaactctcag
cagagtgtccagactctttccctgtggattattcaccaccgcaaacacgcatcccccatt
gtgagggtttggcacagagagctaaagaaagccaaaagcagccggaagctgacctttctg
tacctcgccaatgatgtgattcagaacagtaaaaagaagggacctgagttcacacgggac
tttgagggagttctcgtagatgcgtgctcacatgtagcaagagagacagatgacggctgt
aagaagcacatggagaggctgctgaatatctggcaggagcgtaatctataccgcgcagat
ttcatccagcagctcaaactggccattgaagactccaacagcccgagacaaaagactcca
gtagatgacaggaaaggcacaaaaagaagtttccagaaagtccaggaagaagaggaggaa
gaagatgatgatgatgacgattatagggctcactattcaccgcgtgagacagacacaaat
ggtccgcagctgactgaggagctggtgaaggccctacaggatctggagaacgccgcatca
ggagacgcagccgtccgccagaaaatagcctcactcccacaggaagtgcaggacgtttcc
ttgctggagaagatcacagataaagatgcagcagataagctgtcgaagacggtggacgag
gcatgtctgcttctggcagagtataacgggcgtctggctgcagagctggaggaccgcagg
cagctagcgcgcatgctaacagagtacatccacagccagaaagaggcactcggagagaga
gagaaaaaactcgaggaatacaagcagaagctggcgcgagtcacacaggtgcgcaaggag
ctaaaatctcacatccagagcctgcctgacctttctctactgcccagcgtgactggagga
ctggccccactcccatctgcaggagacctgttctccactgactga
DBGET
integrated database retrieval system
