KEGG   Astyanax mexicanus (Mexican tetra): 103023139
Entry
103023139         CDS       T05042                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10
  KO
K06586  integrin alpha 10
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
amex04810  Regulation of actin cytoskeleton
amex04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103023139 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103023139 (itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103023139 (itga10)
   04810 Regulation of actin cytoskeleton
    103023139 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:amex04515]
    103023139 (itga10)
Cell adhesion molecules [BR:amex04515]
 Integrins
  Integrin alpha subunits
   103023139 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 Integrin_A_Ig_3 FG-GAP_3 ITGAX-like_Ig_3 vWA_SIBA-E FG-GAP_2
Other DBs
NCBI-GeneID: 103023139
NCBI-ProteinID: XP_049336435
LinkDB
Position
6:complement(49359..94319)
AA seq 1171 aa
MEIRTHLLLLELTIILNGLSECFNIDVKQPRIFTGPEDALFGFSVLQHEMGGEKLMLVGA
PWDGPPNNRKGDIYKCIVGDELNSNCSKVNMADNAFQNVSRNLKNSHLGMTLTPDDPNGF
LACAPLWSQECGTSVFSTGICASVNNELQPRETIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGILQYGEISVHEWSLKDYQSTQDVVEAAKNISRQEGR
ETRTAYAIHMACTEAFSAERGARDGATKVMIVVTDGESHDGEELPEALIECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFEMEMSQIGFSTHMLDDGILFGMVGAYDWEGGVLKESSDGRIMPPREAFEKEFP
LELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFDLSPYGDVTITQAFNGEQ
IGSYFGSEVCAVDVDQDGITDILLIAAPMFLGAGNKETGKVYIYCLDGDGFTPNGTLQTQ
PRAQDARFGYAMAVAPDLNHDSYADLLVGAPLEDDHQGALYIYHGDEFYIIPQYKQRVSG
SSLSAGLQYFGRSLSALMDMDGDELLDLAVGAQGSAVLLRSRSIVQINVSLSFQPHSINV
IQKNCQRGGRDSACLTASACFFANSRSPGAYGTQFDLQVGAMLDDRKLSVRALFDSNSQR
QTVTGVTVKVGETLCHTLPFYVFDTADYIRPISFSLRFKINDTESGPVLDEGWPTTVKKT
IPFYKDCGEDDVCVTDLVLKAHMDISGTRQQPYVIRSPRRRLAVEVQLQNRLENAYNTSL
TLQYSRNLHFSSLSIREDAQFKMECTALSSSSHSCNVSYPVFRSQSKVNFMLEFEFSCTS
LVSKVQMKLVAASDSVERESTLSDNTVQLQTVVQYEPDLFITSDSNLNRYEVHPTRTLSE
GTGPEFYTHFRVQNLGCYVVNNLELSVSLPAVASGDRVFSSVVEAFSHNASGVSCSIRND
LAELKAAQRDVRPLHPEDMKKNEILNCSTAWCMEVVCEIQQLLKGQTAFIRITRRVHDNF
FRQAKFKAVMIVGWYQLSARESSLITLGSAALWRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALIIFILWKLGFFTRKQRTDQDENHED
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggagattagaacacacctgctgctgctggagctgaccatcattctgaacggactgtct
gaatgttttaacatcgacgtgaagcagccgcgtatcttcaccggcccggaggacgctctc
ttcgggttctcggttcttcagcacgagatgggtggagagaaactgatgctggttggtgct
ccatgggatggcccacccaataacaggaagggagatatctacaagtgcattgtgggagat
gagctgaattctaactgctctaaggtcaatatggctgataatgccttccagaacgtgtcc
aggaacctgaagaactcccacctgggaatgacgctcactccggatgatccgaacggattt
ctggcctgcgcccccctgtggtctcaggagtgcgggacgtcggtcttcagtaccgggatc
tgtgcgtctgtcaacaacgaactacagcccagagagacgatcgcccccaccgcccagagg
tgcaccacctacatggatatagtgatcgttctagacgggtcgaacagtatctacccctgg
tacgaggtgcagaacttcctcagcaacatcctcagcaagttccacatcagtccggagcag
atgcaggtggggatcctgcagtacggggagatctcagtacatgagtggtctctgaaggac
tatcagtcgacgcaggacgttgttgaagctgccaagaacatcagccgtcaggagggacgc
gagacccgcacagcatacgccatccacatggcctgcacggaggcgttcagtgctgagaga
ggggcgagagacggagccacgaaggtgatgatcgtggtgacggacggagagtcacatgat
ggggaggagcttcctgaagccctgattgagtgtgagaaacgtaacatcaccagatatgcc
attgccgttctaggtcattatatccgcaggcagcaggatcctgagaccttcattaatgag
ataaaatacatcgccagcgacccggacgagaagtacttctttaatgtaacggatgaagca
gcgctaaatgacatcgtagacgcactgggggatcgcatcttcagtctggagggaactctg
ggatataatgaaagtgcctttgaaatggagatgtcacaaattggcttttcaacacatatg
ttagatgacgggatcctgtttgggatggtgggagcatacgactgggagggaggagtgctg
aaggaaagtagtgatgggaggatcatgcctcctcgagaagcttttgagaaggaatttcct
ttggagctaaagaaccacgcagcttacctgggttacaccgtgtcctctgtgattgtgggg
gattggaggaggctgtacgtggccggcgctccccggtttaaacacaaaggaaaggtgatt
ctgtttgatctcagcccgtatggagacgtcaccatcacacaggccttcaatggtgaacag
attggctcgtatttcggaagcgaggtttgtgcggtggacgtggatcaggacggtataacg
gatatcctcctcatcgctgcccccatgttcctgggagccggaaacaaggagacggggaag
gtttacatctactgtctggatggggacgggttcacacctaacgggacgctgcagacccag
cccagagcccaggacgctcggttcggttacgccatggctgtggctccagatcttaatcac
gacagttacgccgaccttctggtgggagcaccgctggaggatgaccatcagggggcgcta
tacatctaccacggcgatgaattctatataataccccagtataaacagcgtgtctctggc
tcctccctctctgcagggctgcagtatttcggccgcagtctgagcgctctgatggatatg
gacggtgatgagctgctggacttggctgtaggagctcagggcagcgccgtcctcctcagg
tctcggagtatagttcagattaacgtcagcctgtccttccagccgcactccatcaacgtc
atccagaagaactgccagcggggcggtcgggactccgcctgcctcaccgcctccgcctgt
ttcttcgccaacagccgctctcccggagcctacggcacgcagttcgacctgcaggtcggt
gccatgctggacgaccggaagctttctgtacgcgctctgttcgactccaactcccagaga
cagaccgtaaccggcgtcacggttaaagtgggcgagacgctctgccacaccctgcccttc
tacgtcttcgacactgcggactacatccgaccaatcagcttctctcttcgcttcaaaatc
aacgacactgaaagtggacccgtactcgacgaaggatggccgaccacagtgaagaaaact
atccccttttataaagactgtggtgaagatgatgtgtgtgtgacagacctggttctgaaa
gcccacatggatatctctggaacacggcagcagccgtatgtgattcgcagtccccgcaga
cggttagctgtggaggttcagcttcagaaccgactggagaacgcttacaacaccagcctc
accctgcagtactccagaaacctgcacttcagcagcctcagcatacgggaggatgcccag
tttaagatggagtgcacggctctgagctccagctctcactcctgtaacgtcagttacccg
gtgttccgctcccagtccaaggttaattttatgctggagtttgagtttagttgcacatca
cttgtcagtaaagtccagatgaagctagtggcagcaagtgacagtgttgagcgggagagc
actctgtctgataacacagttcagttacagactgtagttcagtatgagccggatctcttc
atcacaagtgactccaatctgaaccggtatgaggtccatcccaccagaaccttgtcggag
gggacgggaccagagttctacacacattttagggttcagaatctgggctgttacgtggtg
aataatctggagctgagtgtgagtttacctgctgtagcttcaggagacagagtcttctcc
tctgtggtggaagctttctcccacaacgcgtcgggtgtaagctgcagtatcaggaatgat
ctggcagagctgaaagctgctcagagggacgtgcgtccgcttcaccctgaggacatgaag
aagaacgagatactgaactgcagcacagcctggtgtatggaggttgtgtgtgaaattcag
cagctcctgaaaggacagacggcgtttatccgcattaccagaagagtccacgacaacttc
ttcagacaggctaagtttaaagctgtgatgatcgtgggatggtatcagttgtctgcgagg
gagtccagtctgatcacgctgggcagtgctgccctctggagggagacggtgctggaggtg
ctgaagggtcgatccattcccatctctctctggatcctgattggcagcatcatcggaggc
ctgcttctactcgccctcatcatctttatcttgtggaagctgggcttctttacaaggaag
cagaggacagaccaggatgagaaccatgaggactga

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