Astyanax mexicanus (Mexican tetra): 103023148
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Entry
103023148 CDS
T05042
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103023148
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103023148
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
103023148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
103023148
NCBI-ProteinID:
XP_049330484
Ensembl:
ENSAMXG00000036933
LinkDB
All DBs
Position
2:51763274..51857910
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AA seq
770 aa
AA seq
DB search
MGCNLCSLQKREEHYKLLYEISQVNGKDLSRASHEEAVEAFRSAKDPIVVQVLRRNPLPR
GQGSSQDVQLVDVCTQTDITFEHIMAIAKLRPSSPPVPDICPFLLSDSCHSLHTMGQEYY
EGSEYLSTMPADAERTDELEYEEVELCRLNSQEKLGLTLCYRTDDEDDIAIYVSEIGPNS
IAARDGRIREGDRILQINGQDVQDRQEAVAVLSSEECRNIVLLVARPEIQLDDAAWLDDE
HSEFLEELKMEMLEEQRREEEEMERAAREEEEQAKKKEQEDIMAGSPSCSFSQERNCVAG
AQHHHLSDGSEHNVLAQIQKRLSQCLRQRRDVAGQSRDAQGLARCSGEGLEDEETEGDRY
QQLLELKCQIRNSGEYDLFYSRSSTIECSLTEQSGGVERELRLLNEELRSIELECQSIMQ
AHQLRKKDQRQPLPAKEQLQRSPRRGHGQHQGSKLADINEHPEKSDKDSSSAYNTAESSR
STPLAMDRSPEHSLQRMVSLTNQKNLKSSLSSLITGRGSPPSHAIRRAPSGSPDHSNPSE
SEQTPPAEEESSPRKGKVLGSRIPYLSQRHQQADVPAHARHYQSYMQLVQQRSAVEYGQS
QLSLLAAGGPQVSRPSEPKLEWKVKVRSDGTRYITKRPVRDRLLRERALKIKEERSSGMT
TDDDAMSEMKMGRYWSKEERKQQLLRAKEQRRRRELMQRCRLESLKESPQSSGEGNKEVS
IIELSHRKMMKKRNKKILDNWMTIQELMTHGAKAPEGAKVHNAFLSVTTV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgctccctgcagaagagagaggaacattacaaactgctgtacgag
atttcgcaggtgaatgggaaggacttgtcgagggccagtcatgaggaggcagtggaagca
ttccgcagtgccaaagaccccatcgtggtccaggtgctccggcggaaccctctcccccgg
ggccaagggtcatctcaggatgtccagctggtggacgtgtgcacacagacagatattacc
ttcgagcacatcatggctatcgccaaactccgccccagcagcccacccgtgccagacatc
tgccccttcctgctctcagacagctgccactctcttcacaccatgggtcaggagtattat
gaggggagtgagtatctctccaccatgccggctgatgctgagaggacggatgagttggaa
tatgaggaggtggagctgtgtcggttgaacagtcaggagaagcttggactcactctctgc
tacaggacagatgatgaggatgacattgctatctacgtgtcagagattggaccaaacagc
atcgcagcacgagatggccgaattcgggaaggggaccgtattttgcagatcaatgggcag
gatgtgcaggacagacaggaggcagtggctgtgctctccagtgaagaatgcagaaacatt
gtactgcttgtagcaaggccagagattcagctggatgatgcagcctggctggatgacgag
cacagtgaatttttggaagaacttaaaatggagatgcttgaagaacagaggagagaggag
gaggagatggagagagcagccagagaagaggaagagcaggccaagaagaaagagcaggag
gatataatggctgggagtccgtcttgctcctttagtcaagagaggaactgtgttgctgga
gctcaacaccaccacttgtccgatggttctgagcacaacgttttggcccaaatccagaaa
agactgtcccagtgtttacggcagcggcgggatgtggcgggccagagccgtgacgcccaa
ggattagctagatgctcgggggaaggacttgaggatgaggaaactgaaggtgatcgatac
cagcaactgctagagctgaaatgccagattcgcaacagcggtgaatatgacttgttctac
agtcgcagcagtactatcgagtgtagcctgacggagcagagcggtggagtggaacgcgag
ctgcgtcttctcaatgaggagctgcgcagcatcgagctggaatgccagagcatcatgcag
gcgcatcagctgcggaagaaggaccagcggcagccacttccggccaaagagcagctgcag
cgaagtcctcgacgtgggcacgggcagcatcaaggaagcaagctggccgatatcaatgag
cacccagagaaatcagacaaagacagctcgagtgcttataatacggcggaaagctcacgt
agcacacctctagctatggaccgctctccagagcattctcttcagaggatggtcagctta
accaatcagaagaacctgaagagcagtctaagtagtttgattacaggtcgtggctcaccc
cctagccatgccataaggagggctccgagtggcagtcctgatcatagtaacccctcagag
tcggagcagacgcccccagcagaggaagaaagctcccctaggaaagggaaggtgctaggc
tcaaggattccctacctctcccaacgccatcagcaagcagacgttccagctcatgccagg
cactaccagagctacatgcagctggtccagcagcgctcggccgtggaatacggccagagc
cagctcagcctgctagcagctggtggtccacaggtttccagaccttctgagcccaagctg
gagtggaaggtgaaggttagaagtgacgggacacgatatatcaccaagcggccggtccgg
gacaggcttctgcgagagcgggcgctcaagatcaaggaggagcgcagcagtgggatgacg
acggacgatgatgccatgagcgagatgaagatgggccgctactggagcaaagaggagcgc
aagcagcagctgctgagagccaaagagcagcggcggcggcgggaactgatgcagcgctgc
cgactggagagcctgaaagagagtccgcaaagcagcggggagggcaacaaagaggtcagc
atcatcgagctcagccaccgcaagatgatgaaaaagcgcaacaagaagatcctggacaac
tggatgaccatccaggagttgatgacgcacggagcgaaagcgccagaaggggccaaagtt
cacaacgccttcctttctgttacaactgtatag
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