Astyanax mexicanus (Mexican tetra): 103023162
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Entry
103023162 CDS
T05042
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103023162 (gabra4)
04082 Neuroactive ligand signaling
103023162 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103023162 (gabra4)
Ion channels [BR:
amex04040
]
Ligand-gated channels
GABA-A
103023162 (gabra4)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Zip
OAD_gamma
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
103023162
NCBI-ProteinID:
XP_007247526
Ensembl:
ENSAMXG00000005855
UniProt:
A0A8T2LT97
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Position
10:42935177..42981721
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AA seq
561 aa
AA seq
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MVSAKKETVTAMYPASISTILCLLCVTACIKRISGQLKKEDKLYPENFTRILDRLLDGYD
NRLRPGFGGRETEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDQRLRYEGPIEILRLN
NLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHSCPLKFGSYAYPKTEMIYTWTKGPKNSVEVPPESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQAERAKKKQAKSAA
AAAAATGKSSTPSGKSKDTEEVLQQNSDTNGNLRKRVNSTTQSQPDSKGSQRTDSSSKST
AAVSKQPQTSQLSSSSTTTTTSSSASQSRLHPKSAGQANAAPQASTSKTTPPAPPSTPTI
PGRSSGNTITASTSLHHILGTKLENIQKMDAKTPPGGAPAAGGTSKIDKYARILFPVSFG
AFNMVYWVVYLSKDTMQARGG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtctcggccaagaaggagacggtgactgcgatgtaccccgcgtccatttctacaatc
ctctgcttgctctgcgtgacggcttgcatcaagaggatatctggacagctcaagaaggag
gataagttgtatcccgagaatttcacacgcatattggacaggctgctggacggctatgac
aacagactaagacctggattcgggggtcgagagacggaggtgaagactgacatctatgtc
accagttttggcccagtgtctgatgtggaaatggagtacacaatggacgtgttcttcaga
cagacctgggttgaccagaggttgaggtatgaggggcccattgagattctgcggctaaac
aacctgatggtgaccaaagtgtggactcctgatacgttcttcaggaacggcaaaagatct
gtggcccacaacatgaccgcccctaacaaactcttcaggatcatgaaaaacggaacaatc
ctttacaccatgagattgacaataagtgcagagtgtccaatgaagctggtggattttcca
atggacggccattcctgtccgctgaagtttggcagctatgcttaccctaagacggagatg
atctacacatggaccaaagggccgaagaactcagtggaagttcctcctgaatcctccagc
cttgtgcagtatgatctgataggacaaactgtttccagtgaaaccgtgaaatccatcaca
ggtgaatatgtggtgatgactgtctacttccacttgaaacggaaaatgggctacttcatg
attcagacgtacatcccctgcatcatgacagtaatcctttcccaagtgtccttctggata
aataaggaatccgtgcccgccagaactgtcttcggtatcaccacagtcctcaccatgacc
accctgagcatcagtgcccgtcactctcttcccaaggtctcctacgccacagccatggac
tggttcatcgctgtgtgcttcgccttcgtcttctccgccctgatcgagtttgcagccgtg
aactacttcaccaacgcccaggcagaaagagcaaaaaagaagcaggccaagagcgcagca
gctgcagccgccgcaaccggcaagagctccacgccgtccggcaagagcaaagacaccgag
gaggttctgcagcaaaactccgacacgaatggcaacctacgcaaacgcgtgaactccacc
actcagtctcagcccgactccaaaggcagccaaagaaccgattcctccagtaagagcact
gcagctgtgagcaaacagccccagaccagccagctatcctccagcagcacgacaacaaca
acaagcagctcggccagccaatcacgacttcaccccaaatcggccggtcaagccaacgca
gcaccccaagcctcgacgtccaagaccacaccccctgctccgccctccacaccaaccatc
cctgggcggtcgtcaggcaacaccatcactgcctccacctctcttcaccatattttaggg
accaagttggagaatatccagaaaatggacgccaagacgccacctggtggcgcccctgcg
gcaggagggaccagcaagattgacaaatacgctcgcatccttttcccagtgtccttcggg
gcttttaacatggtgtactgggtggtgtacttatccaaagacacaatgcaagcaagagga
ggctaa
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