Astyanax mexicanus (Mexican tetra): 103023202
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Entry
103023202 CDS
T05042
Symbol
msx2a
Name
(RefSeq) homeobox protein MSH-A
KO
K09341
homeobox protein MSX
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103023202 (msx2a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
103023202 (msx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Pacs-1
Motif
Other DBs
NCBI-GeneID:
103023202
NCBI-ProteinID:
XP_007253636
Ensembl:
ENSAMXG00000038880
UniProt:
A0A8T2MCA1
LinkDB
All DBs
Position
2:complement(70057129..70063268)
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AA seq
240 aa
AA seq
DB search
MATELRGEEREERGAPASPQRLVSSLPFSVEALMRDRGAPGGGRLQPCPGPLITRPAALL
HPRPSGPSSPVKSESSDQDDASWLMKSSCASPPPRQLSPATCSLRKHKTNRKPRTPFTTS
QLLALERKFRQKQYLSIAERAEFSSSLCLTETQVKIWFQNRRAKAKRLQEAEMEKLKMAG
KPMLHSGLSLPFPLGAQPQAAAAALLYGHSGQFPFHRYMLPMPPLGMYTSPATYNMYHLS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccacggagctccggggagaagagcgggaggagcgcggggctccagcctctccgcag
cgcctcgtctccagcctgcccttcagcgtggaggcgctgatgagggaccggggggctccg
gggggcggcaggctccagccctgccccggccccctcatcaccagacccgccgcgctcctc
cacccacgaccctccggaccctcctccccggtgaagtccgagtcttcggatcaagatgat
gcttcctggctgatgaagtcctcgtgcgcgtctcctccaccacgtcagttgagtccggcc
acgtgttccctcagaaaacacaagacgaatcgcaagccacgaacccccttcaccaccagt
cagctcctggcgctggagcggaagttccggcagaagcagtacctgtccatcgcagagcgg
gcggagttctccagctctctctgtctgaccgagactcaggtgaagatatggttccagaac
cgacgagccaaagccaagcgtctgcaggaggcggaaatggagaaactgaaaatggctggt
aaacctatgctgcactcgggcctctctttaccgttccccctcggcgcacagccgcaggcg
gcggcggcagcgctcctgtacggacactcgggacagttccccttccacagatacatgctg
cccatgcctccactggggatgtacacctctcctgccacctataacatgtatcacctgtcc
tga
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integrated database retrieval system
