Astyanax mexicanus (Mexican tetra): 103023235
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Entry
103023235 CDS
T05042
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1 isoform X1
KO
K13129
survival motor neuron protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103023235 (smn1)
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
103023235 (smn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
DUF4911
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
103023235
NCBI-ProteinID:
XP_007258383
Ensembl:
ENSAMXG00000013884
UniProt:
W5L376
A0A8T2KSX4
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All DBs
Position
22:19868935..19875511
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AA seq
277 aa
AA seq
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MANGTNEVVFCRGAGQSEDSDIWDDTALIKAYDKAVASFKNALKGEDEMAPLKQEKLGNK
RKNNKKNKSRKRCNASPDREWKVGDACYAFWSEDGNVYAATISSIDPDKGTCVVYYTEYG
NEEEQNLKDLLSELEDLQEETKTDVKEAKSSTEESDTSSAPHQSHQQKHKPKGKAPKGPP
MWGPGFPPGPPFGPHFRTSDGKRRGDSGPAFPGWPPMLPPGPPMIPPPPPMSPDMLEGDE
ALGSMLISWYMSGYHTGYYLGLKQGRREAAARKSHHK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggctaatggaactaatgaagttgtgttttgtcgcggagctggacagagtgaagattca
gacatttgggatgacactgccttgataaaagcatatgataaagcagttgcatcattcaag
aatgctctaaaaggagaggatgaaatggctccactaaaacaagagaagcttggaaataaa
cgcaaaaataacaaaaagaacaaaagcagaaagagatgtaatgcatctccagacagagag
tggaaagtcggagacgcctgttatgcgttttggtcagaggatggaaatgtgtacgctgct
accatttcctctattgacccagataagggcacctgtgtagtgtattacactgagtatggt
aatgaagaggagcagaatctgaaggaccttctgtctgaactggaagatttgcaagaggaa
acaaaaacagatgtgaaagaggccaagtcttcaacagaagagagtgacacatcttctgct
ccacaccagtctcatcaacagaagcacaagcctaaaggcaaagctccaaaaggacctccc
atgtggggtcctggctttccccctggacccccatttggacctcacttcagaacgtctgat
ggcaaaagaagaggagattctggacctgccttccctgggtggcccccaatgcttccacct
ggtccaccgatgatcccacctcctccaccaatgagtccagatatgttggagggtgatgag
gccttaggcagcatgctgatctcgtggtacatgagtggctaccatacaggatactactta
ggcttgaaacaaggccgcagagaggctgcagcaaggaagtctcatcacaaatga
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integrated database retrieval system
