KEGG   Astyanax mexicanus (Mexican tetra): 103023323
Entry
103023323         CDS       T05042                                 
Symbol
sde2
Name
(RefSeq) replication stress response regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amex03041]
    103023323 (sde2)
   03032 DNA replication proteins [BR:amex03032]
    103023323 (sde2)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103023323 (sde2)
Spliceosome [BR:amex03041]
 Complex C
  Other components
   Complex C specific factors
    103023323 (sde2)
DNA replication proteins [BR:amex03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    103023323 (sde2)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    103023323 (sde2)
SSDB
Motif
Pfam: SDE2 SDE2_2C Sde2_N_Ubi_vert Tmemb_cc2 Exonuc_VII_L ubiquitin
Other DBs
NCBI-GeneID: 103023323
NCBI-ProteinID: XP_007236091
Ensembl: ENSAMXG00000013678
UniProt: A0A8B9KCK5
LinkDB
Position
23:21693056..21700527
AA seq 406 aa
MDVSVVSPAFRCVNLSVGAEATVRELRDLLASREGIPSEDCYVSSNGRISDQDHKLQAGA
VYRLELRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKEMADWLKKQA
DREAEKEQRRLERIQRKLAEPKHYFTDIDYEQQCHDLSERLEDSVLKGMQASSSGVVQAD
EGPSRKRPAAKDGNVATKKKCFWTGVGGLDDMDSSEGDSDEGDEAEDSPSTSASVSGASC
ISETPGKPAASSRGSEKPEVQQEQPSSSCSSSSSSSPAPSTPSQENEAEEITEEPKKQNS
SDGQEVEDTVTTNAEGESCSCPADSIETPAVQPVQSEGPLDLLCVSGVEDLVALGLERLK
EELLQRGMKCGGTLQERAARLFSVKGLSPDQIDPALLAKPSKGKKK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggatgtgtcggtggtttctcccgcttttcgctgtgttaatctgagcgtaggagccgag
gcgaccgtccgggagctcagagacctactcgcctccagagagggaatcccatctgaagat
tgctacgtgagcagcaatgggcgaatttcagatcaggaccacaaactccaggctggagct
gtgtatcgcctggagcttcgtctgtgtggtggcaaagggggctttggctccatgctaagg
gcgcttggtgcgcagattgagaagaccaccaaccgcgaagcatgtagggatctaagcggc
cggagactcagagacgtcaatcatgaaaaagagatggctgactggttgaagaaacaggca
gatcgtgaagcagagaaggagcagcgacgtttggagaggattcagaggaaattggctgaa
ccgaagcactatttcacagacattgattacgaacagcagtgtcatgacctctcagagagg
ctggaggactctgtactgaaaggcatgcaggcttcatccagtggcgtagtgcaggctgat
gaaggaccaagtcgcaaaagacctgcagcaaaagatggaaatgtagctacaaagaagaaa
tgcttctggactggtgttggtggtctggacgacatggacagttccgaaggagacagtgat
gagggtgatgaggctgaagattctccctccacttctgcttcagtctctggagcttcctgc
atctctgagacacctggaaaaccagcagctagcagcagagggagtgagaagcctgaggtc
cagcaggagcagcccagcagcagctgcagtagtagttccagcagcagcccagcaccctcc
actccttcacaggagaacgaggcagaggagatcacagaagaaccaaagaaacagaacagc
agtgatggacaggaagtggaggacactgtgaccacaaatgcagagggagagagctgtagc
tgcccagctgacagtatcgaaacaccagcagtgcaaccagtgcagtcagaaggtccgctg
gatttgctctgtgtgagcggtgtggaggatctggtggctctggggttggagcggctgaag
gaggagcttttgcagcgagggatgaagtgtggggggactctgcaggagcgtgctgcacgc
ctcttctctgttaaaggactgagcccagatcagatcgaccctgcactcttggccaagccc
agcaaggggaagaagaaatag

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