Astyanax mexicanus (Mexican tetra): 103023366
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Entry
103023366 CDS
T05042
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
amex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103023366 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
103023366 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103023366 (mnat1)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103023366 (mnat1)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103023366 (mnat1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103023366 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
zf-RING_2
ATG14
zf-P11
DUF604
Motif
Other DBs
NCBI-GeneID:
103023366
NCBI-ProteinID:
XP_049337378
Ensembl:
ENSAMXG00000029183
LinkDB
All DBs
Position
7:complement(9671021..9685753)
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVDMLFVRGSGNCVQCDTPLRKSNFRL
QLFEDPAIDKEVEIRKRVLKIYNKRDFDFSSLREYNDYLEQVEEIVYNLTNNVDIERTKQ
IMEQYQRENRDVIQRNKVKLTREQEELEEILLLEQQDTEQRRLETLQEEQRQLQAKRKNK
QALLDELERSQLPASILLAQHKDRAAQLETQIEKQKQSVKPTTIFSTGIPKGQTVSLAPV
IRVEEVLYKYQPIHVETYGPPLPELEQLDRLGYLNHVRTATPQDLAGGYTSELACHRALQ
DAFSGLFTSLV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcagggctgcccgagatgcaaaaccactaaatacaggaacccgtctctgaag
ctgatggttaatgtttgtggacacacactctgtgagaactgtgtggacatgctgtttgta
cgggggtccggtaattgtgtgcagtgtgatacccccctcagaaagagtaatttccgactg
cagctctttgaagatcctgctattgataaggaggtggagattcggaagagggttctgaaa
atttataataagagggattttgacttctccagtctcagagagtataacgactacctggag
caggtggaggaaatcgtatataacctgacgaataacgttgacattgagagaacaaagcag
ataatggagcagtaccagagagagaaccgagacgtcatacagagaaacaaagtcaaactg
acacgtgagcaggaggagctggaggagattctgctgctagagcagcaggacacggagcag
aggaggctggagacgctgcaggaggagcagagacaactacaggccaaacgcaaaaacaaa
caggctctactggacgagctggaacgctctcagttgccggcgtctattcttctggctcag
cataaagacagagcagcacagctggagactcagatcgagaaacagaaacaaagcgtcaaa
ccaaccaccatcttctccacaggaatccccaagggtcagacggtgtctctcgctccagtt
attcgtgtggaggaggtgttgtacaagtatcagccgattcatgtggagacgtatggacct
cccttacctgaactggagcagctggacagactggggtatctgaatcatgtgagaactgcg
acgccgcaggatctggctggtggttacacatctgaacttgcctgccatcgagcgctacag
gacgctttcagcggcctctttacatcgttagtataa
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integrated database retrieval system
