Astyanax mexicanus (Mexican tetra): 103023399 Help Entry 103023399         CDS       T05042                                  Symbol casc3 Name (RefSeq) protein CASC3   KO K14323   protein CASC3 Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex03013   Nucleocytoplasmic transport amex03015   mRNA surveillance pathway amex03040   Spliceosome Brite KEGG Orthology (KO) [BR:amex00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103023399 (casc3)   09122 Translation    03013 Nucleocytoplasmic transport     103023399 (casc3)    03015 mRNA surveillance pathway     103023399 (casc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:amex03019]     103023399 (casc3) Messenger RNA biogenesis [BR:amex03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      103023399 (casc3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  103023399 NCBI-ProteinID:  XP_022524189 Ensembl:  ENSAMXG00000032452 LinkDB All DBs Position 19:complement(33088051..33099754) Genome browser AA seq 757 aa AA seqDB search MADRRRRRRRASQDSEEEEEEASGSDSTGSASQAAKTRPRVPEPVEAPAVRSAPKSDVES ECESEDGGVGEAVLSDYDSADPEENGSHSEGGEEEEEEEGEHFSDEEAARPAAEQKAAVD TPAEELGPEQEGEEEKMKEVKVEEKSNLAGERQSGDGQESTDDPENKSAGKTGQKLDDDE DRKNPAYIPRKGLFFEHDVRGQAQDEERPKGRHRKLWKDEGRWEHDKFREEEQAPKSREE LIAVYGYDLRNGTGPSEGRPYRSRKPRHTGSPNQEPKRYKDFEKPTRTSWQGSAPGSRNA PPPTMTLQSGPPSAPHSASRPQARPSSQAPTRSFQGGRGPVQSHRAETRGYGKPGMEGPP PRNTRPQPLEGERAPRLRGRGSHGPPAERSPAVVVEDVRSEDEEEGEIPAVTTTYTAHHY KTERETAPSPRRQESGPVAEPAGGTGPIRESSPPPERPVEKKSYSLARRTRAKPSDLSKQ ASLEDSAPSMQPTPTAIKSESWQGETSTQSGLTGLDQDLARLSLAGQNWAQSPPSYLRPE MRGIPSTMHMGGGPHQYGNMEDMGVGGGRAKRYSSQRQRPVPEPAPMHIGVMEGHYYEAM PFQGPIYAHSDGPAPMPPQGLLVQPEMHLPHPAHPGLHPHQSGGPMPNPALYAAPPVSMS PGQPPPQQLLPPPFYPPPGVMTFSNTNYPYPAGATLPPMYPNPQAQSQVYGGVTYFDTVQ QQAQPKPSPPRRTSQPVTVKPPPPEDQSRKPSEEIRS NT seq 2274 nt NT seq  +upstreamnt  +downstreamnt atggcggaccggcgacgacgaaggcggcgcgcttctcaggacagcgaagaggaggaggag gaggcttcgggctcagacagcaccggctccgcctcacaagcggccaagacccggccgagg gtcccggagcctgtcgaggccccggcggttcgcagcgccccaaaaagcgatgtcgagtcg gagtgtgaaagtgaagatggtggtgtaggtgaagctgtcctttcagactacgacagtgcg gatcctgaggagaatggttctcactcagagggaggagaggaagaggaggaggaggaggga gagcattttagtgatgaagaggctgcacgccctgctgcagaacagaaagctgcagtggat actcctgcagaggagttgggacccgaacaagagggggaagaggaaaagatgaaagaagtg aaggtggaagaaaagagcaatctggcaggagagagacagagtggggatggccaggagagt acagacgacccagagaataagtcggcgggtaaaacaggccagaagctggatgatgacgag gatcgtaagaatccagcttacatccctcgcaagggcctgttctttgagcatgacgtcaga ggccaggcccaggatgaggagaggccaaaaggcagacataggaagttatggaaagatgag ggtcgctgggagcatgataagttccgggaagaggagcaggcgcctaaatctcgtgaggag ctgatagctgtgtatggttatgaccttcgtaatggcactgggcccagcgaaggcagacca taccggtccagaaaaccaaggcatactggctcaccaaaccaggagcccaaacgttacaag gatttcgagaagcctacacgcacctcgtggcagggctcagctcccggttcccgcaatgct cccccacccacaatgactcttcaatctggccctccctctgctccccattctgcttcccgt ccccaagccaggccttcctcacaagcacctacacgcagcttccagggtggccgtggcccg gtgcagtcccaccgcgcagagactagaggatacgggaagcctggaatggaggggccccca cctcgcaatacaagaccccagcctttggagggcgaacgtgcacccaggctaagaggccgg ggttcgcatggaccgcccgcagagcgcagccctgctgtggtggtggaggacgtacgcagt gaagacgaagaggagggtgagatccccgctgtgaccaccacctacaccgcacatcactac aagacggagcgggagactgctccatcgccaaggcggcaggagtccggtcctgtagctgag ccagccggtgggacaggaccaataagggagtcctcccctcccccagagaggcctgtggaa aagaaatcctactcccttgcacggaggacccgggcaaaaccctcggaccttagcaagcag gcgtctctagaggactctgctccatcaatgcagcccacccccacagctataaagagtgag tcctggcagggtgagacgagcacacagagtggactgactgggctggatcaggacctggct cgtctcagcttggctgggcaaaactgggcccaaagcccaccttcgtacctgcggcctgag atgaggggcatccccagcactatgcatatgggaggaggtcctcatcaatacggcaacatg gaagacatgggtgttggaggcggtcgagctaaacgttattcctcacagcggcagagacca gttcctgaacctgcaccaatgcatataggggtgatggagggtcattactatgaagccatg ccattccagggaccaatctacgcacacagtgatgggcctgcccccatgccaccgcaggga ctgctggtccagccagagatgcacctgccccaccctgcacacccaggcttgcatccacac cagtcgggaggacccatgcctaaccctgctctctatgctgccccacctgtttctatgtca cccggacaacctcccccacagcagttactgcccccgccgttctatcccccacctggggtc atgacctttagcaacacaaactacccctaccctgctggagctacactaccaccaatgtac cccaacccacaggcccagtcacaggtatatggtggcgtcacgtattttgacacggtacag cagcaagcccagcctaaaccctcacccccacgacgcacctcccagccggtcactgtcaag cctcccccaccagaggaccagagcagaaagcccagtgaggagattcgttcctag

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