Astyanax mexicanus (Mexican tetra): 103023410
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Entry
103023410 CDS
T05042
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103023410 (dhx35)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103023410 (dhx35)
Spliceosome [BR:
amex03041
]
Complex C
Other components
Complex C specific factors
103023410 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
AAA_19
AAA_23
Motif
Other DBs
NCBI-GeneID:
103023410
NCBI-ProteinID:
XP_022522164
Ensembl:
ENSAMXG00000020520
LinkDB
All DBs
Position
13:complement(49050343..49073890)
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AA seq
700 aa
AA seq
DB search
MAAPHSTMRFWKPGCEGPGVSEERDLSTEPSGPVLIYNPHSTLSVEKQRQKLPVFKHRNN
ILYLVESFQTVVIVGETGCGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAATSVANRVAE
ERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQRKRRDLRLIVASATLDAKKFQDFFNLNESGDPSKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHDAEEDGDVLAFLTGQEEVEKVVSMLQDQARTLS
RYGIKKHLRVLPMYAGLPYAEQMKVFERLPPTVRKVVVATNIAETSITINGIVFVIDCAF
VKLRAYNPRTAIESLVVTPISKASAAQRAGRAGRNRPGKCFRLYTEEDFEKLPESTVPEM
QRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDQYGRLTEPMGIR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVFPSDQKKAAAREHRKFAVAE
GDHLTMLNVYEAFVKHQKSSQWCQEHFLNYKGLVRAMSVREQLRRLLNKFKVPRTSSEGD
PDVILRCIVSGFFANAARLHHSGSYRTLRDDRELHIHPNSVLYGEKPQKWVVFNEVVQTS
KYFMRDVTAVESAWLVELAPHFYKQAKHGSLSSSKRTKVF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccccactccacgatgcggttctggaagcccgggtgtgagggtcccggtgtt
tctgaggagagagatctgtcgacggagcccagcgggccagtgctcatctacaacccccac
agcaccctgtctgtggagaaacagaggcagaaactgcctgtatttaagcacaggaacaat
attctgtacctggtggagagctttcagacggtggtgattgtgggagagaccggctgtggg
aagagcacacagattcctcagtatcttctggaggctggatgggctgctgaagggaaggtg
attggtgtaacccagcccaggagggtggcggctacctcggtggctaatcgtgtagcagaa
gagcgtggagcactgctggggcatgaggttggatacaccatccgctttgatgactgttca
gatcctcatgctactcgcataaagttcctcacagatgggatgttggtgagggagatgatg
gcggaccccctgctgaagaagtacagtgtcctgatgctggatgaagctcatgagaggacg
ctctacactgacattgccatcggccttctcaagaagattcagcggaagagaagagatctg
cggctgatcgtggcgtcggctacgctggatgctaagaaatttcaagactttttcaacctg
aatgaatctggagacccgagtaaagatacctgcgggattctgactgtggagggaagaact
ttccctgtggacgttttctacactgtcagtccggtgccagactacgtgaaggcaactgtt
gagactgtgctgaagattcatgatgctgaggaggatggagatgtgctggcatttctcact
ggacaggaggaggttgagaaggtggtatcgatgctgcaggatcaggctcggactctttct
cgatacgggattaaaaagcaccttcgtgttcttcccatgtacgccggcctcccctacgct
gagcagatgaaggtgtttgagaggctgccccctactgtccggaaggtggtggtggccact
aacatcgctgaaacctccatcactataaacggcatcgtgtttgtgatagactgtgcgttt
gtgaagctccgagcgtataaccctcgcaccgccatcgagtcgctggtggtcacgcccatc
tctaaagcctccgccgctcagcgggccggaagagccggacgcaaccggcccggcaagtgc
ttcagactttacacagaggaagactttgagaagcttccagaatccacagttcctgaaatg
cagcgcagtaacctggccccagtcatcctccagctgaaagcactgggcatcgacaacgtt
ctccgcttcagcttcctgtctccgccgccggctcagtccatggtgcaggccttggagttg
ctgtatgctctcggtgggctggatcagtacgggcgtctgacggagccgatggggatccgc
atggccgagttccccctcagccccatgttcgcaaagatgctgctggagtccggaaacttc
ggatgctccaaggagatcgttaccatagcagccatgatgcagatccagaacatcttcgtt
ttcccgtcggatcagaagaaagccgctgctcgagagcacaggaagtttgcagtggctgaa
ggagatcacctgaccatgctgaatgtttacgaggcttttgtgaagcatcagaagagttct
cagtggtgtcaggagcatttcctgaactataaaggtctggtgcgagccatgagcgtgcga
gagcagctgcggcgcctgctcaacaagttcaaggtgcctcgaacgtccagcgaaggtgac
ccggatgtaattctcaggtgtatcgtgtcgggattcttcgctaacgcagcccggctgcat
cactccggatcatacagaactttgcgggacgatcgggagctccacatccatcccaactca
gtgctttacggagaaaagcctcaaaaatgggtggtctttaatgaggtggttcagacctcc
aagtatttcatgcgggacgtgacggcggtggagtcggcctggctcgtggaactggcacct
catttttataagcaggccaagcacggttctctgagcagcagcaaacggacgaaggtcttc
tga
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