Astyanax mexicanus (Mexican tetra): 103023600
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Entry
103023600 CDS
T05042
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103023600 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103023600 (copb2)
Membrane trafficking [BR:
amex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103023600 (copb2)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103023600 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
103023600
NCBI-ProteinID:
XP_022533672
Ensembl:
ENSAMXG00000005818
UniProt:
A0A3B1INP6
LinkDB
All DBs
Position
8:complement(52341783..52359338)
Genome browser
AA seq
942 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIVTGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSLVKIFKNFKE
KKSFRPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLADKVAASQESNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNAAMVSKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEHFLRETCLGKTRPATDYPLVTPNEERNVLEEA
SGYEPKGVLPTPPQQVDDSEEAPAEAGVLASVMAAVSAPVASAVASFAPPEPEPVKEPEV
DIEVGDELKDKTLEELEDDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcgcaagctcacggctcggtccgaccgtgtcaagagc
gtggaccttcatcccacggagccatggatgctggccagtctgtacaacggcagcgtctgc
gtctggaaccatgaaacacaaaccttggtgaagacgtttgaagtgtgcgacctgccagta
cgagcctcaaagtttgtggccaggaaaaactgggttatcactggagcagatgatatgcag
attcgggttttcaactacaacacactagaacgggtccatatgttcgaggctcattcggat
tatatccgctgcattgctgtgcaccccacccagccctacatccttactagtagtgatgac
atgctgattaagctgtgggactgggagaagaagtggtcctgtagccaggtgtttgagggc
cacacacactacgtcatgcagatcgtcatcaaccccaaagacaacaaccagtttgctagt
gcatcgctggacagaaccatcaaggtctggcagctgggatcctcgtctcctaacttcact
ctggagggtcatgagaaaggagtgaactgcattgattattacagtggaggagataagcct
tatcttatttctggagctgatgacaggctggtgaagatttgggactatcagaataagacg
tgtgtgcagactcttgaaggtcatgctcagaatgtatcatgtgtgagcttccacccagag
ctgcccatcatcgtcacaggatctgaggatggcacagtacgtatctggcactccagcact
tatcgactggagagcacactgaactacggcatggagcgggtgtggtgtgtctgtggcctg
cgtggctccaacaatgtggcgttaggttatgatgagggcagcatcattatcaagcttggt
cgtgaagagccagccatgtcaatggataccaatggaaagattatctgggctaagcactct
gaggttcagcaggctaacctaaaggcaatgggggatgctgagattaaagatggagagagg
ctgcctctggctgtaaaagacatgggcagctgcgagatctacccacagactattcaacac
aaccctaatggaaggtttgtggtggtgtgtggagatggggagtacatcatctacacagca
atggctctgaggaacaaaagcttcggctcagctcaggagtttgtctgggcccacgactcc
tcagaatatgcgatcagagaaagcaacagcttggtgaaaatcttcaagaacttcaaggag
aagaagtctttcaggccagactttggagctgaaggtatctatggtggatttttgctgggc
gtcaggtctgttaacggtttggccttctatgactgggagaacacagagctgattcgacgc
attgagattcaacccaaacatatcttctggtcagactctggagagctggtgtgtatcgcc
actgaggagtccttcttcatcctgcgctatctggctgataaagtggctgcatctcaagag
tctaatgagggagtgactgaagatggtattgaagatgcttttgaggttcaaggtgagatc
caggagattgtaaagacaggtctgtgggtgggagactgcttcatctacacaagctctgtc
aacaggctcaactactttgtaggaggagagattgtcaccatcgcccacctggacaggact
atgtacctgctgggctacatccctaaagatgaccgactgtacctgggagacaaggagctg
aacattgttagttactctctactggtgtcggttctggagtaccagacggcggtaatgcgg
cgagactttggaatggccgataaagtacttcccaccattccaaaagagcagaggaccaga
gtggcccattttctggagaaacagggcttcaagcagcaggcacttgctgtatccactgac
ccagagcacagatttgagcttgctctgcaattaggagaactgaagatcgcctaccaatta
gcagtagaagcagagtctgagcagaagtggaagcagttggctgagctggccatcagcaag
tgccagtttgggctggcccaggagtgcctccatcatgcccaggactatggtggcttgctg
ctgctggccaccgcctccggtaacgctgctatggtgagcaaactggccgaaggtgccgag
cgcgatggcaagaacaacgtggcctttatgacctacttcctgcaggggaaattggaccag
tgtctggaactcctgatcaggaccaatcggttgcctgaggctgcctttttggctcgcacg
tatctacccagccaagtgtccagagtggtgaagctgtggagagagagcctgtctaaagta
aaccaaaaggcagccgagtctctggccgaccccacggagtacgagaacctattccctggc
ctgaaggaggcttttgtggccgagcactttctccgtgagacctgcctgggcaagactaga
ccggctactgactacccactggtcacgcctaatgaggagcggaacgtgttggaggaagcc
agtggttatgagcccaaaggagttttacctactccaccacagcaggtagacgactctgag
gaagctccagcagaagcaggtgtcctggcctcagtcatggccgcagtttcagctcctgta
gcctctgcagtagctagttttgctcctccagagcctgaacctgttaaagagccagaagtg
gacatcgaagtaggggatgaactgaaagacaagactctggaggaactggaagacgacttg
gacaacatggagctggatgacatcgacaccacagacgtcaacctggacgacgacttctta
gacgattaa
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