Astyanax mexicanus (Mexican tetra): 103023637
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Entry
103023637 CDS
T05042
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04141
Protein processing in endoplasmic reticulum
amex04210
Apoptosis
amex04217
Necroptosis
amex04218
Cellular senescence
amex04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103023637
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103023637
04217 Necroptosis
103023637
04218 Cellular senescence
103023637
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103023637
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103023637
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
103023637
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C2: calpain family
103023637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
103023637
NCBI-ProteinID:
XP_049327064
Ensembl:
ENSAMXG00000013685
LinkDB
All DBs
Position
23:21650190..21688982
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AA seq
704 aa
AA seq
DB search
MDVFGGMSARIQRERLQAEGVGSNEQALRFLNQDYEALKQESLESGRLFEDPSFPAQPQS
LGFKELAPHSSKTRGVTWKRPTELTENPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
DRLLHRVVPHGQSFTDDYAGIFHFQFWQFGDWVDVVIDDRLPVKEGELMFVHSAEGSEFW
SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRSAPKDLHRIIAKALDRGSL
LGCSIDITSAFDMEAITFKKLVKGHAYSVTALKEVNFRGNREQLIRIRNPWGQVEWTGAW
SDNSSEWNSIDPNEKEEMNAKMEDGEFWMSFQEFKRQFSRLEICNLTPDALSEDTLSFWN
TIKFEGGWRRGSTAGGCRNHANTFWINPQYKITLLEEDDDPEDNEEACSFLVALMQKDRR
RYRKQGQDMHTIGFAIYEVPDEFRGCQSVHLKKDFFLRHSSCARSETFINLREVSTRLRL
PPGEYLIVPSTFEPGKEADFVLRVFTEKQSETQEMDDDVSFILDEEGEIREEDIDASFRK
MFTQLAGEDMEISVHELRTILNRVVSKHRDLTTDGFSLEACRCMVALMDKDGSARLGILE
FQILWNKIRKWLGIFRQFDLDKSGTMSSYEMRLALESGGFKLNNKLNQVLVARYAEKEMI
DFDNFICCLVKLEAMFRTFQQLDRDGSGAIELNLSEWLYLTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttggtgggatgtcggccagaatccaacgtgagcggctgcaggcggagggc
gtgggctctaatgagcaagcgctgcgtttcctcaaccaggactatgaggctctgaagcag
gagagcctggagagcggccggttgttcgaggaccccagcttccctgcccagcctcagtct
ctgggctttaaagagctcgccccacactcctccaaaacccgcggcgtcacctggaagaga
cccactgagctgactgagaatcctcagttcatagtcggtggtgcaacgaggacagacatc
tgccaaggagctcttggtgactgctggctcctggctgctatagggtctcttactctaaat
gaccggctgctgcacagagtggtccctcacggtcagagctttacagatgactatgccggc
atattccacttccagttttggcagtttggtgattgggtggatgtggttattgacgatcgt
ctgccggtgaaggagggagagctgatgttcgtgcactcggctgaggggagcgagttctgg
agcgccctgctggagaaggcctatgcaaagctgaatggatcatacgaggccctgtctggt
ggctccaccactgagggctttgaggatttcaccggcggagtttctgagatgtacgagctg
cgcagcgcccccaaggacctgcatcgcatcattgctaaagccctggatagaggctcgtta
ctgggctgctccatagatattaccagtgcctttgacatggaggcaatcactttcaagaag
cttgtgaaaggccacgcctactctgtcacagctctgaaggaggtgaatttccgaggtaac
agagaacagctgatccgtatcaggaacccctgggggcaggttgagtggaccggagcctgg
agtgacaattcctctgaatggaattcaatcgatcccaatgaaaaagaagagatgaatgcc
aaaatggaggatggagagttctggatgtcgtttcaggagtttaagcgtcagttctctcgg
ctggagatctgtaatctgacgcctgatgctctgagtgaggacacactgagtttctggaac
actatcaagtttgagggaggctggaggagaggaagcacagcaggaggctgcaggaaccat
gccaacacattctggataaacccgcagtataagatcaccctgctggaggaggatgatgat
cctgaggataatgaagaggcctgcagctttctggtggctctaatgcagaaggaccggcgg
cgctaccgcaaacaaggccaggacatgcacactattggctttgccatctatgaggtccca
gatgagttccgtggttgccagagtgtccatctgaagaaggactttttcctgcgccactcc
tcctgtgctcgctccgagaccttcatcaacctgcgggaggtgagcacaagactccgcctt
cctccaggagagtatctaatcgtcccctccacgttcgaacctggaaaagaagctgatttc
gtcctcagagtcttcactgagaaacagtccgagacacaagagatggatgatgacgtgtcc
tttattctggatgaagagggggagattagagaggaagacattgacgcttcattcaggaaa
atgttcactcagctggctggagaggatatggagatatcagttcatgagctgaggaccatc
ctgaaccgagtggtgtccaaacacagagatctgaccacagacggcttcagtctggaggca
tgcaggtgtatggtggccctcatggataaagatggcagtgctcgtctgggcatcttggag
ttccagattctgtggaataagatcagaaagtggctgggaattttccggcagtttgatctg
gacaagtcaggaacgatgagctcttatgaaatgcgcctggccttggaatcaggtggattt
aagctcaacaacaagctgaaccaggtgcttgtggcacgatacgctgaaaaagagatgatc
gactttgataactttatctgctgcctggttaaactggaggccatgttcagaaccttccag
caactggacagagacggctctggagcgattgaacttaacttatctgagtggctgtacctg
accatgtgcggctga
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