Astyanax mexicanus (Mexican tetra): 103023657
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Entry
103023657 CDS
T05042
Symbol
bop1
Name
(RefSeq) LOW QUALITY PROTEIN: ribosome biogenesis protein BOP1
KO
K14824
ribosome biogenesis protein ERB1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103023657 (bop1)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103023657 (bop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
ANAPC4_WD40
NBCH_WD40
Coatomer_WDAD
ESSS
Motif
Other DBs
NCBI-GeneID:
103023657
NCBI-ProteinID:
XP_022517936
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MSARGAAAERNSGMKKTTEKRKNREKEEQQQEEEELPMFDKNADKVGHLDDTDEEKEDLS
DSEESVFSGLEDSGTDDDDDEEDNGDDDDDDDGDDASGEEEEEQDEENHNKVEKDPAAGE
TSLTPQTEDKPAKSRKLKKKKSVTSGGDEEEERGKSERDSGLKISSQVDEYEQDTSDEED
IRNTVGNIPMEWYKDFPHIGYDLDGKKIFKPIRSKDELDEFLEKMENPDYWRTVQDKMTG
SDVRLSDEQVDLVHRLQHGKFGDINFNEYEPAIDFFSNEVMIHPVTNRPEDKRSFIPSLI
EKEKVGKLVHAIKMGWIKPRRPKDSAPLYYDLWAKEDPNSILGRHKMHVPAPKIRLPGHE
ESYNPPPEYLLTEEERLAWEQQDPEERKLSLLPQKFPSLRAVPAFTRFIHERFERCLDLY
LCPRQRKMRVNVNPEDLIPKLPKPKDLHPFPTTQSLVSAGHSSLVRSISVAPGGQWLVSG
SDDGTVRFWEVATARCLKTVEVGGAVKSVAWSPNPAVCLVAISHGNTVVLMNPGLGDRLI
LSATDQLISSYEEPTEVKDQPVEWSLAEGTEHQQGQRLILTHPRAVKQVTWHGKGDYLAC
VMPDVSSNVQVVIHQVSKRRTQNPFRKNKGMVQCVSFHPIRPYFFVATQRHVRVYNLIKQ
ELTKKLMTNCKWVSSMAIHPGGDNVICGSYDCRVLLAWLDLDLSTKPYKMLRHHKKALRG
VAYHRQYPLFASGSDDGSVIVCHGMVYNDLLQNPLIVPVKVLKGHTITHDLGVLDVAFHP
TQPWVFSSGADGTVRLFT
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcgcggagctgcagcggagagaaacagcgggatgaagaaaacaacagaaaag
aggaaaaacagagaaaaggaggagcagcagcaggaggaggaggagctccccatgttcgat
aaaaacgctgataaggtgggacatctggacgatactgacgaggagaaggaggatctctca
gacagcgaggagagcgtcttctctggactggaggactctggaacggacgacgacgatgat
gaagaagataatggtgatgatgatgatgatgatgatggtgatgatgccagtggtgaggaa
gaggaggagcaggatgaggaaaatcataataaagtagagaaggatcccgctgctggagaa
acgagtctcactcctcagactgaagataaaccagcgaagagcaggaagctgaagaagaag
aagagcgtgacctcaggaggagatgaagaagaggagcgagggaagtctgagagagatagt
ggtctgaagatatcttctcaggtggacgagtacgagcaggatacgtcagatgaagaggat
atcaggaacactgtggggaatattccgatggaatggtataaagattttcctcatatcgga
tacgacctcgacggcaagaagatctttaaaccaatcaggagtaaagatgagctggatgag
tttctggagaaaatggagaatccggattactggagaacggttcaggataagatgacgggt
tcagatgttcgtctgtcggatgagcaggtggatctggtgcatcgtctgcagcacggcaaa
ttcggagatattaacttcaacgaatacgagccggcgattgatttcttcagtaatgaggtg
atgattcacccggtgaccaaccgacctgaagacaagcgcagcttcatcccctccctgatc
gagaaagagaaggtggggaagttggttcatgcgattaagatggggtggattaaaccccgc
cggcccaaagactccgcccccctgtactacgacctgtgggctaaagaggaccccaactcc
atcctgggacgccacaagatgcacgtccccgcccccaagatcagactcccgggacacgag
gagtcctacaaccccccacctgagtacctgctgaccgaggaagagagactggcctgggag
cagcaggacccggaggagcggaagctgagtctgctgccacagaagttcccgagtctgagg
gcagtgcccgccttcacccgcttcatccacgagcgcttcgagcgctgcctcgacctctac
ctgtgcccccgccagcgcaagatgagggtaaatgtgaatccagaggatttgattcctaaa
ctgcccaaacccaaagatctgcatccgtttcccacaacccaatctctggtaagcgcgggt
cactccagtctggtgcgcagtatcagtgtggcccccggggggcagtggctggtatcagga
tcagatgacggtacggtccggttctgggaggtcgctacggcgcgctgcctgaagacggtg
gaagtgggcggagccgtgaagagcgtggcgtggagtcccaatcctgcggtgtgtctcgtc
gccatcagccatgggaacacggtggttctgatgaaccctggtctgggggatcggctgatc
ctcagcgctactgatcagctgatctcctcgtatgaagagccgacggaggttaaagatcag
ccggtggagtggagcctcgccgaggggacagaacaccaacagggccagcggctcatcctc
acacacccccgagcggtgaaacaggtgacgtggcacggtaagggggattacctggcctgc
gtgatgcccgacgtcagcagcaatgtgcaggtggtgatccaccaggtgagcaagcgccgc
acgcagaaccccttccgcaagaacaagggcatggtgcagtgcgtatccttccaccccatc
cggccctacttcttcgtggccactcagcgtcacgtccgcgtctacaacctcatcaagcag
gagctcaccaagaagctcatgaccaactgcaagtgggtctccagcatggccatccacccg
ggaggagataacgtgatctgcgggagctacgactgtcgggttttactggcctggcttgat
ctggatctctccacaaaaccctataaaatgctgaggcaccacaagaaggctctgaggggc
gtggcctatcacaggcagtaccccctgtttgcctcggggtcagatgatggcagtgttatc
gtctgtcacggaatggtctacaatgatctgctgcagaatcctctgatcgttccagtgaaa
gttctgaagggtcacaccatcactcacgacctgggggttctggacgtggcgtttcacccc
acccagccgtgggtgttctcctcgggggccgacggcacggtccggctcttcacctag
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