Astyanax mexicanus (Mexican tetra): 103023755
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Entry
103023755 CDS
T05042
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04510
Focal adhesion
amex04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103023755 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103023755 (lamc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
DUF745
Death
Motif
Other DBs
NCBI-GeneID:
103023755
NCBI-ProteinID:
XP_022533612
Ensembl:
ENSAMXG00000020858
LinkDB
All DBs
Position
8:complement(50852537..50970279)
Genome browser
AA seq
1595 aa
AA seq
DB search
MSRLALVVSALALTLWATCSRAAMDECADESGRPQRCMPEFVNAAFNVTVVATNTCGSPP
EEYCVQTGVTGVTKSCHICDARDPRQHHSAVYLTDYNNQADTTWWQSQTMLAGIQYPNSI
NLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREGGPWTPYQYYSGSCEKTYSKLNRGF
IRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTL
NRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKDEYSKLVCNCKHNTEG
DDCGVCKPFYNDRPWRRATADNPNECLPCNCNGKSGECYFDSELYRATGHGGHCRNCADN
TDGPNCERCLDNYYRDGSGQRCLPCSCNPVGSLSTQCDITGRCSCKPGVMGDKCDRCQPG
YHTLTEAGCSPCSCNPAGSTQECDVNTGRCQCKDNVDGFNCDRCKLGYFNLDPQNPQGCT
PCFCFHHSTVCESADGYSIHTITSNFDRDDEGWKGKQRDGSSVPVQWSLASQEISLISDD
YFPMYFVAPAKFLGNHLLSYGQNLTLNFRVDRRDARLSAEDVMLEGAGLQVAVPLIAQGN
SYPGEQMQTFVFRLHQTTDYPWRPVLTHGDFQKLLHNLTSIKIRGTYSERSAGYLDNVSL
VSARRGPGTPARWVEKCTCPPGYVGQHCGQCALGYRRSRPELGLYSPCEPCNCNGHSETC
DPATGMCNCQDNTAGMSCERCKDGFYGDATVGSSSDCKPCPCPSGATCALVPKTKEAVCT
NCPAGTTGKRCELCDDGFFGDPLGKSGPVRACRECKCSSNIDPNAVGNCDRETGECLKCI
YNTDGFFCDRCKEGFYGNALATNVADKCKPCSCSPYGTVDQQTTCMQVTGECTCLPHVTN
RDCSACQPGFYNLQSGKGCERCNCNQIGSTNGHCDIVSGQCECQPGVTGQQCERCEVNFF
GFSTSGCKPCDCDPEGSRLAQCREDGRCECRPGFVGARCDMCEENYFYNRSTPGCQQCPN
CYSLVRDKVNQHRQKLHDLQTLIDNLGTQDTVSDKAFEDRLKEAEKAIMDLLKEAQASKD
VDKGLLDRLKGINNTLTTQWNRLQNIRNTVDNTGTLADKAQNRVREAEKLIDRARDELDK
AKDAISKVDIKTPTTTGDPNNMTLLAEEARNLAEKHKLEADQIEKTAKDANDTSTKAYNL
LKKTLDGENKINSDIDELNKKYSEAKDLAKNLEKQASKVQAEAEEAGNKALKIYANLTSL
PPFDVKSLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLKGKENEVRKLLEKGKTEQQT
ADQLLARADAAKALAEEAAKKGLSTYQEAQDILSNLRDFDKRVNDNKTAAEEAMKRIPEI
KAIINAANDKTRQADAALGNAAADAKDAKSKAEEAEKIASNVQKGSAKTKADAEKAFEDT
MKLDQEVNDMMKQLAAAEKELGEKKKEADNDMMMASMASDNAKTAEENARKAKDAVRTVL
GTINDLLGQLGNIDKVDLTKLDQIDSSLKDAKDKMEGSELDKKLNDLNDIAKGQEAMIND
YDRQIREIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtctggccctcgtcgtgagcgcgctcgctctgactctgtgggctacgtgcagc
cgcgcggccatggacgagtgcgcggacgagtccgggcggcctcagcgctgcatgcccgag
ttcgtgaatgccgcctttaacgtgaccgtggtcgccaccaacacctgcggctcgccgccc
gaggagtactgcgtgcagaccggcgtcaccggagtcaccaagtcctgccacatctgcgac
gcccgggacccgaggcagcaccacagcgcggtctacctcaccgactacaacaaccaggcg
gataccacctggtggcaaagccagaccatgctggcgggcatccagtaccccaactccatc
aacctcaccctgcatctaggaaaggcctttgacatcacctatgttcgcctgaagttccac
accagccgtccagagagctttgccatctacaagcgcacgcgtgagggcgggccctggacc
ccgtaccagtactacagcggctcctgcgagaaaacctacagcaagctgaaccgaggcttc
atccgcactggtgaagatgagcagcaggcgctttgcacggacgagttcagtgacatctca
ccactcaccggtggaaacgtggccttttccacactcgagggccgaccgagcgcgtacaac
ttcgacaacagccctgtactgcaggactgggtgacggccacagacatccgggtgaccctg
aacaggctgaacaccttcggagatgaagtcttcaacgatcccaaggtcctcaagtcctac
tattatgccatctccgattttgctgtgggaggaaggtgcaagtgtaacggccacgccagc
gagtgtgtgaaggacgagtacagcaagctggtgtgtaactgcaagcacaacaccgagggg
gacgactgcggcgtctgcaagcccttctacaacgaccggccctggaggagagccacggcc
gacaaccccaacgagtgtctgccatgcaactgcaacgggaagagcggcgagtgctacttc
gactcggagctgtaccgagccacgggtcacggaggccactgccggaactgcgcagacaac
acagatgggcccaactgcgagcgctgtctggataattactaccgagatggatcgggccag
cgctgtctgccctgcagctgtaaccccgtgggctctctcagcacccagtgtgacattaca
ggtcgctgcagctgcaaacccggcgtgatgggagacaagtgcgaccgctgccagcctgga
taccatacattgactgaggcgggctgcagcccctgctcctgcaaccctgctggaagcact
caggagtgtgatgtgaatacaggacgctgccagtgcaaggacaacgtggatggcttcaac
tgtgacaggtgtaaactgggctactttaacctggaccctcagaatcctcagggctgcaca
ccatgcttctgcttccatcattccacagtgtgtgagagtgcagatggctacagcatacat
accatcacctccaacttcgatcgggatgatgaaggctggaagggtaagcagagagacggc
tccagtgttccagtgcagtggtccttagcttctcaggaaatctccctcatctctgatgac
tacttccccatgtactttgtggcaccagcgaaattccttggtaaccatttgctgagctac
ggacagaacctcactctgaacttccgggtggatcggcgtgacgctcgtctctctgctgag
gatgtgatgctggagggggcggggctgcaagttgctgtgcccctaattgcacagggaaac
tcttatcctggagagcagatgcagacttttgttttcagactccatcagactacagactat
ccctggaggccagtgctgacacacggagacttccagaagcttctccacaaccttacctcc
atcaaaatccgtggtacctacagtgagagaagtgctgggtacttggataacgtgtctttg
gtgagtgcacggcgcggtcctggaactccagcgcgctgggtggagaagtgtacgtgtcct
ccgggttacgtgggtcagcactgtggtcagtgcgctctgggatacaggaggagcaggcct
gagctgggtctctacagcccctgtgagccctgtaactgcaacggacacagcgaaacctgc
gaccctgcaacaggaatgtgtaactgccaggataatactgcaggaatgagctgtgaaagg
tgtaaggacggcttttacggcgatgctacagttggatcatcttctgattgtaaaccctgc
ccgtgtccctcaggggccacatgtgcacttgtgcccaaaaccaaggaggcggtgtgcacc
aactgcccagcaggcactacaggtaagcgctgtgagctgtgtgatgacggtttcttcggt
gacccgctgggaaagagcggtccagtccgagcctgcagggagtgtaaatgcagcagcaac
atcgaccctaatgccgtaggaaactgcgacagagagactggagagtgtctgaagtgcatc
tacaacacagacggcttcttctgtgatcgctgtaaagagggcttctacggcaacgctctg
gccaccaacgtcgctgacaaatgcaaaccttgttcctgctctccatacggtactgtggac
cagcagaccacctgcatgcaggtgactggtgagtgcacgtgtttaccccacgtcaccaac
cgagactgcagcgcctgccagcctggattctacaacctgcagagcggaaagggctgtgaa
cgttgtaactgcaaccagatcggctctactaacggtcattgtgacattgtgagcgggcag
tgtgagtgtcagccgggggtcacaggtcagcagtgtgagcgctgtgaggtcaactttttc
ggattcagcacctctggctgtaaaccctgtgactgtgaccctgagggctctcggctggcg
cagtgcagagaggacgggcgctgtgagtgtcgtccaggcttcgtgggagctcgttgtgat
atgtgtgaagagaattacttctacaaccgctctactccaggctgccagcagtgccccaac
tgctacagcctcgtgagggacaaggtgaaccagcacagacagaaacttcatgacctgcag
actctgatcgacaacctcggcacccaggacacagtgagcgataaggcttttgaggatcgt
ctgaaagaagctgagaaggccatcatggatttactgaaggaggcacaggccagcaaagat
gtggacaaaggcctcttggatcgtcttaagggcatcaacaacactctgaccacccagtgg
aaccgcctgcagaacattaggaacactgtggataacactggtactctggcggataaagct
cagaacagagtgcgcgaggcggagaaactcatcgaccgagccagagatgagctggacaag
gcaaaggacgccatcagcaaagtggatatcaaaactccgacaaccactggagatcccaac
aatatgaccctcctcgctgaagaggctcgcaacctggcagagaagcataagctagaagct
gatcaaatagagaagactgcgaaagatgccaacgacacttctaccaaagcttacaactta
ctgaagaagactctggatggcgagaataagatcaacagtgacattgatgaactcaacaag
aaatacagtgaggcaaaggatctggcaaagaacctggagaaacaagccagtaaggtgcaa
gctgaagcagaagaggcgggaaacaaagctctgaagatctacgccaacctgacgagcctg
ccacccttcgacgtcaagtccctggaggatgaggccagcaaaataaagaaggaagcgtca
gacctggataaacttattgacaagactgagaaggagtacaatgatctgagagacgacctg
aagggtaaagagaacgaagtgcgcaaactgctggagaaggggaagaccgagcagcagacg
gcggatcagctgctggcgcgggcggatgcagccaaggccctggcagaggaggcagcaaag
aaagggctttccacttaccaggaggcccaggacattctcagcaatctcagagacttcgat
aagagagtaaatgacaacaaaaccgcagcagaggaggccatgaaacgtatcccagaaatc
aaagccataatcaacgcagctaacgacaagacccgccaggccgacgccgcgctgggaaac
gcagcagctgatgctaaagacgccaaatccaaagcagaggaagctgagaaaatcgccagc
aatgtgcaaaagggttcagctaaaactaaagcagatgcagagaaggcgtttgaagatact
atgaaactggatcaggaggtgaacgacatgatgaagcagctggcggctgcagagaaagag
ctcggcgagaagaagaaggaggcagacaatgacatgatgatggctagcatggcctctgat
aacgcaaagacagctgaggagaacgcccggaaagccaaagacgctgtccgcactgtcctc
ggcacaatcaacgatttactcggccagctcggcaacatcgataaagtggacctgaccaaa
ctggaccagatcgacagctccctgaaggacgccaaggacaagatggagggcagcgagctg
gacaagaagctcaacgatctgaacgacatcgccaagggccaggaggccatgatcaatgac
tacgaccggcagatccgcgagatccgcgccgacatcgccaacctcaacgacatcaagaac
actcttcctgaaggctgcttcaacacgccgtctctagagcggccttaa
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