KEGG   Astyanax mexicanus (Mexican tetra): 103023755
Entry
103023755         CDS       T05042                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103023755 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103023755 (lamc1)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B DUF745 Death
Other DBs
NCBI-GeneID: 103023755
NCBI-ProteinID: XP_022533612
Ensembl: ENSAMXG00000020858
LinkDB
Position
8:complement(50852537..50970279)
AA seq 1595 aa
MSRLALVVSALALTLWATCSRAAMDECADESGRPQRCMPEFVNAAFNVTVVATNTCGSPP
EEYCVQTGVTGVTKSCHICDARDPRQHHSAVYLTDYNNQADTTWWQSQTMLAGIQYPNSI
NLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREGGPWTPYQYYSGSCEKTYSKLNRGF
IRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTL
NRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKDEYSKLVCNCKHNTEG
DDCGVCKPFYNDRPWRRATADNPNECLPCNCNGKSGECYFDSELYRATGHGGHCRNCADN
TDGPNCERCLDNYYRDGSGQRCLPCSCNPVGSLSTQCDITGRCSCKPGVMGDKCDRCQPG
YHTLTEAGCSPCSCNPAGSTQECDVNTGRCQCKDNVDGFNCDRCKLGYFNLDPQNPQGCT
PCFCFHHSTVCESADGYSIHTITSNFDRDDEGWKGKQRDGSSVPVQWSLASQEISLISDD
YFPMYFVAPAKFLGNHLLSYGQNLTLNFRVDRRDARLSAEDVMLEGAGLQVAVPLIAQGN
SYPGEQMQTFVFRLHQTTDYPWRPVLTHGDFQKLLHNLTSIKIRGTYSERSAGYLDNVSL
VSARRGPGTPARWVEKCTCPPGYVGQHCGQCALGYRRSRPELGLYSPCEPCNCNGHSETC
DPATGMCNCQDNTAGMSCERCKDGFYGDATVGSSSDCKPCPCPSGATCALVPKTKEAVCT
NCPAGTTGKRCELCDDGFFGDPLGKSGPVRACRECKCSSNIDPNAVGNCDRETGECLKCI
YNTDGFFCDRCKEGFYGNALATNVADKCKPCSCSPYGTVDQQTTCMQVTGECTCLPHVTN
RDCSACQPGFYNLQSGKGCERCNCNQIGSTNGHCDIVSGQCECQPGVTGQQCERCEVNFF
GFSTSGCKPCDCDPEGSRLAQCREDGRCECRPGFVGARCDMCEENYFYNRSTPGCQQCPN
CYSLVRDKVNQHRQKLHDLQTLIDNLGTQDTVSDKAFEDRLKEAEKAIMDLLKEAQASKD
VDKGLLDRLKGINNTLTTQWNRLQNIRNTVDNTGTLADKAQNRVREAEKLIDRARDELDK
AKDAISKVDIKTPTTTGDPNNMTLLAEEARNLAEKHKLEADQIEKTAKDANDTSTKAYNL
LKKTLDGENKINSDIDELNKKYSEAKDLAKNLEKQASKVQAEAEEAGNKALKIYANLTSL
PPFDVKSLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLKGKENEVRKLLEKGKTEQQT
ADQLLARADAAKALAEEAAKKGLSTYQEAQDILSNLRDFDKRVNDNKTAAEEAMKRIPEI
KAIINAANDKTRQADAALGNAAADAKDAKSKAEEAEKIASNVQKGSAKTKADAEKAFEDT
MKLDQEVNDMMKQLAAAEKELGEKKKEADNDMMMASMASDNAKTAEENARKAKDAVRTVL
GTINDLLGQLGNIDKVDLTKLDQIDSSLKDAKDKMEGSELDKKLNDLNDIAKGQEAMIND
YDRQIREIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq 4788 nt   +upstreamnt  +downstreamnt
atgtcccgtctggccctcgtcgtgagcgcgctcgctctgactctgtgggctacgtgcagc
cgcgcggccatggacgagtgcgcggacgagtccgggcggcctcagcgctgcatgcccgag
ttcgtgaatgccgcctttaacgtgaccgtggtcgccaccaacacctgcggctcgccgccc
gaggagtactgcgtgcagaccggcgtcaccggagtcaccaagtcctgccacatctgcgac
gcccgggacccgaggcagcaccacagcgcggtctacctcaccgactacaacaaccaggcg
gataccacctggtggcaaagccagaccatgctggcgggcatccagtaccccaactccatc
aacctcaccctgcatctaggaaaggcctttgacatcacctatgttcgcctgaagttccac
accagccgtccagagagctttgccatctacaagcgcacgcgtgagggcgggccctggacc
ccgtaccagtactacagcggctcctgcgagaaaacctacagcaagctgaaccgaggcttc
atccgcactggtgaagatgagcagcaggcgctttgcacggacgagttcagtgacatctca
ccactcaccggtggaaacgtggccttttccacactcgagggccgaccgagcgcgtacaac
ttcgacaacagccctgtactgcaggactgggtgacggccacagacatccgggtgaccctg
aacaggctgaacaccttcggagatgaagtcttcaacgatcccaaggtcctcaagtcctac
tattatgccatctccgattttgctgtgggaggaaggtgcaagtgtaacggccacgccagc
gagtgtgtgaaggacgagtacagcaagctggtgtgtaactgcaagcacaacaccgagggg
gacgactgcggcgtctgcaagcccttctacaacgaccggccctggaggagagccacggcc
gacaaccccaacgagtgtctgccatgcaactgcaacgggaagagcggcgagtgctacttc
gactcggagctgtaccgagccacgggtcacggaggccactgccggaactgcgcagacaac
acagatgggcccaactgcgagcgctgtctggataattactaccgagatggatcgggccag
cgctgtctgccctgcagctgtaaccccgtgggctctctcagcacccagtgtgacattaca
ggtcgctgcagctgcaaacccggcgtgatgggagacaagtgcgaccgctgccagcctgga
taccatacattgactgaggcgggctgcagcccctgctcctgcaaccctgctggaagcact
caggagtgtgatgtgaatacaggacgctgccagtgcaaggacaacgtggatggcttcaac
tgtgacaggtgtaaactgggctactttaacctggaccctcagaatcctcagggctgcaca
ccatgcttctgcttccatcattccacagtgtgtgagagtgcagatggctacagcatacat
accatcacctccaacttcgatcgggatgatgaaggctggaagggtaagcagagagacggc
tccagtgttccagtgcagtggtccttagcttctcaggaaatctccctcatctctgatgac
tacttccccatgtactttgtggcaccagcgaaattccttggtaaccatttgctgagctac
ggacagaacctcactctgaacttccgggtggatcggcgtgacgctcgtctctctgctgag
gatgtgatgctggagggggcggggctgcaagttgctgtgcccctaattgcacagggaaac
tcttatcctggagagcagatgcagacttttgttttcagactccatcagactacagactat
ccctggaggccagtgctgacacacggagacttccagaagcttctccacaaccttacctcc
atcaaaatccgtggtacctacagtgagagaagtgctgggtacttggataacgtgtctttg
gtgagtgcacggcgcggtcctggaactccagcgcgctgggtggagaagtgtacgtgtcct
ccgggttacgtgggtcagcactgtggtcagtgcgctctgggatacaggaggagcaggcct
gagctgggtctctacagcccctgtgagccctgtaactgcaacggacacagcgaaacctgc
gaccctgcaacaggaatgtgtaactgccaggataatactgcaggaatgagctgtgaaagg
tgtaaggacggcttttacggcgatgctacagttggatcatcttctgattgtaaaccctgc
ccgtgtccctcaggggccacatgtgcacttgtgcccaaaaccaaggaggcggtgtgcacc
aactgcccagcaggcactacaggtaagcgctgtgagctgtgtgatgacggtttcttcggt
gacccgctgggaaagagcggtccagtccgagcctgcagggagtgtaaatgcagcagcaac
atcgaccctaatgccgtaggaaactgcgacagagagactggagagtgtctgaagtgcatc
tacaacacagacggcttcttctgtgatcgctgtaaagagggcttctacggcaacgctctg
gccaccaacgtcgctgacaaatgcaaaccttgttcctgctctccatacggtactgtggac
cagcagaccacctgcatgcaggtgactggtgagtgcacgtgtttaccccacgtcaccaac
cgagactgcagcgcctgccagcctggattctacaacctgcagagcggaaagggctgtgaa
cgttgtaactgcaaccagatcggctctactaacggtcattgtgacattgtgagcgggcag
tgtgagtgtcagccgggggtcacaggtcagcagtgtgagcgctgtgaggtcaactttttc
ggattcagcacctctggctgtaaaccctgtgactgtgaccctgagggctctcggctggcg
cagtgcagagaggacgggcgctgtgagtgtcgtccaggcttcgtgggagctcgttgtgat
atgtgtgaagagaattacttctacaaccgctctactccaggctgccagcagtgccccaac
tgctacagcctcgtgagggacaaggtgaaccagcacagacagaaacttcatgacctgcag
actctgatcgacaacctcggcacccaggacacagtgagcgataaggcttttgaggatcgt
ctgaaagaagctgagaaggccatcatggatttactgaaggaggcacaggccagcaaagat
gtggacaaaggcctcttggatcgtcttaagggcatcaacaacactctgaccacccagtgg
aaccgcctgcagaacattaggaacactgtggataacactggtactctggcggataaagct
cagaacagagtgcgcgaggcggagaaactcatcgaccgagccagagatgagctggacaag
gcaaaggacgccatcagcaaagtggatatcaaaactccgacaaccactggagatcccaac
aatatgaccctcctcgctgaagaggctcgcaacctggcagagaagcataagctagaagct
gatcaaatagagaagactgcgaaagatgccaacgacacttctaccaaagcttacaactta
ctgaagaagactctggatggcgagaataagatcaacagtgacattgatgaactcaacaag
aaatacagtgaggcaaaggatctggcaaagaacctggagaaacaagccagtaaggtgcaa
gctgaagcagaagaggcgggaaacaaagctctgaagatctacgccaacctgacgagcctg
ccacccttcgacgtcaagtccctggaggatgaggccagcaaaataaagaaggaagcgtca
gacctggataaacttattgacaagactgagaaggagtacaatgatctgagagacgacctg
aagggtaaagagaacgaagtgcgcaaactgctggagaaggggaagaccgagcagcagacg
gcggatcagctgctggcgcgggcggatgcagccaaggccctggcagaggaggcagcaaag
aaagggctttccacttaccaggaggcccaggacattctcagcaatctcagagacttcgat
aagagagtaaatgacaacaaaaccgcagcagaggaggccatgaaacgtatcccagaaatc
aaagccataatcaacgcagctaacgacaagacccgccaggccgacgccgcgctgggaaac
gcagcagctgatgctaaagacgccaaatccaaagcagaggaagctgagaaaatcgccagc
aatgtgcaaaagggttcagctaaaactaaagcagatgcagagaaggcgtttgaagatact
atgaaactggatcaggaggtgaacgacatgatgaagcagctggcggctgcagagaaagag
ctcggcgagaagaagaaggaggcagacaatgacatgatgatggctagcatggcctctgat
aacgcaaagacagctgaggagaacgcccggaaagccaaagacgctgtccgcactgtcctc
ggcacaatcaacgatttactcggccagctcggcaacatcgataaagtggacctgaccaaa
ctggaccagatcgacagctccctgaaggacgccaaggacaagatggagggcagcgagctg
gacaagaagctcaacgatctgaacgacatcgccaagggccaggaggccatgatcaatgac
tacgaccggcagatccgcgagatccgcgccgacatcgccaacctcaacgacatcaagaac
actcttcctgaaggctgcttcaacacgccgtctctagagcggccttaa

DBGET integrated database retrieval system