Astyanax mexicanus (Mexican tetra): 103023963
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Entry
103023963 CDS
T05042
Symbol
ttc26
Name
(RefSeq) intraflagellar transport protein 56
KO
K19685
intraflagellar transport protein 56
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103023963 (ttc26)
Cilium and associated proteins [BR:
amex03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103023963 (ttc26)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_16
TPR_2
TPR_8
TPR_9
TPR_6
TPR_1
DUF6339
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
103023963
NCBI-ProteinID:
XP_007257209
Ensembl:
ENSAMXG00000009984
UniProt:
A0A3B1JLG6
A0A8B9LWL5
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All DBs
Position
5:26271304..26279080
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AA seq
557 aa
AA seq
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MLLSRVKPAVGGDGSVNSSEKKRKNKSKKIPRLEDYMSQRDYLGGLTLLEFHRNGGVPEE
NADLWIGYCAFHLGDHKRAMEEYKALTLKPDCPAEVWVFLGCALFFLGLYEEAEEMALKG
PKSQLQNRLLFHLAHKFEDEKKLMGFHQNLEDVTEDQLSLASIHYMRSHYQEAIDIYKRI
LLQNREFLALNVYVALCYYKLDYYDVSQEVLAVYLQNFPDSTIALNLKACNHFRLYNGKA
AEVELKNLIDISSSSFEFAKELIRHNLVVFRGGEGALQVLPPLIDVISEARLNLVIYYLR
QDDVQEAYNLIKDLEPTTPQEYILKGVVNAALGQEIGSRDHLKIAQQFFQLVGGSASECD
TIPGRQCMASCFFLLKQFEDVLIYLGSVKSYFCTDDTYNFNYAQAKAALGSYKEAEEVFL
LIQSEKIKNDYVYLSWLARCYIMNQKARLAWELYLTMETSSDSFSLLQLIANDCYKMGQF
YFAAKAFDVLERLDPNPEYWEGKRGACVGIFQLILAGREPRDSLKEVLPMLRSTGNPQVE
YIIRIMKKWAKDNRVGL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgtctcgggtaaagcctgcagttggtggagatggatcagtcaactccagtgag
aagaaaaggaagaataaaagcaagaagatcccccggttggaggattatatgagccagaga
gactacctgggaggtctcacactgctggagttccatcgtaatggaggagtgccagaggag
aatgctgacctctggatcggctactgtgcctttcacctaggggaccacaagagagctatg
gaggagtataaagccttgaccctgaagccagactgccctgctgaggtctgggtttttttg
ggctgtgctctgttttttcttggcctttatgaagaggctgaggaaatggctcttaaaggg
cctaaaagtcagctacagaaccggctgctgtttcatttagcccacaagtttgaggatgaa
aagaaactgatgggtttccaccagaatctggaggacgttacagaggatcagctgagcctg
gcctccatacactacatgcgctcacactatcaagaggccattgacatctacaaacgcatt
ctgctgcagaacagggagttcctggcactgaatgtgtatgtggcgctgtgctattataag
ctggattactacgacgtgtctcaggaggttctggctgtttatctgcagaactttccagac
tctaccatagctctcaacctcaaagcctgcaaccacttcagactgtacaatggcaaagca
gctgaggtggagctaaagaacctaatagatatctcctccagctcgtttgagtttgcaaag
gaactgattcgtcacaacctggtggtgttccggggtggggagggtgcgctgcaggttctt
cctccactcattgacgtcatctctgaggctcgactcaacctggtcatctactacctcaga
caagatgatgttcaggaggcctataatctcatcaaggacttggagcccaccactcctcag
gagtatattctgaagggagtggtgaacgctgctctagggcaggagatcggatctagagat
catttaaagattgcccagcagttttttcagctggtcggtggctcagccagtgaatgcgac
accatcccgggccggcagtgtatggcttcatgctttttcctactgaaacagtttgaggat
gtgctcatctaccttggctcagtaaagagttacttctgcacagatgacacctataatttc
aactacgcacaagccaaagctgctttaggaagctataaggaggcagaggaggtgttcctg
ctaatccaaagtgagaagatcaagaatgattatgtgtatctgagctggctggcacgatgc
tacattatgaaccagaaggctcgactggcatgggaactttatctaaccatggaaacttcg
tctgactccttcagcctcctgcagctcattgcaaacgactgctacaagatgggtcagttt
tatttcgcagcaaaggcgtttgatgttctggagaggctggatccaaacccagagtactgg
gaggggaagcggggagcatgcgttggaatattccagctaatcctcgcaggaagagaaccc
agagatagtctgaaggaggtgttgcccatgctgcgcagcacagggaacccacaggtggag
tacataatccgcatcatgaagaaatgggccaaagataacagagtcggactttga
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