Astyanax mexicanus (Mexican tetra): 103023991
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Entry
103023991 CDS
T05042
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
amex03083
Polycomb repressive complex
amex04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103023991 (rbb4l)
03083 Polycomb repressive complex
103023991 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
103023991 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103023991 (rbb4l)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103023991 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
103023991 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
103023991 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103023991 (rbb4l)
PRC2.2
103023991 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103023991 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103023991 (rbb4l)
Chromatin remodeling factors
NuRD complex
103023991 (rbb4l)
NuRF complex
103023991 (rbb4l)
NuRF complex (fruit fly)
103023991 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
ANAPC4_WD40
eIF2A
MIOS_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
103023991
NCBI-ProteinID:
XP_007240214
Ensembl:
ENSAMXG00000018532
UniProt:
W5LGY0
LinkDB
All DBs
Position
16:17379574..17386060
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISGSPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTAKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LESQAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaagtgtacgacgatgctgtagaggagcgggtcataaacgaagaatat
aaaatatggaagaaaaacacaccctttctctatgacttagtcatgacacatgcacttgaa
tggccaagtttaacagtgcagtggttgcccgatgtgaacaggccagagggcaaggactat
gcagttcacagactggtattggggacacacacttctgatgagcagaaccacttggtgatt
gccagtgttcagatcccaaatgatgatgctcagtttgacgcatcgcattatgacagtgaa
aaaggagcagagtttggtggatttgggtctgtgagtggcaagattgaaattgagattaag
atcaatcatgaaggagaggtgaaccgagccaggtacatgccacagaacccctgcattatt
gccacaaagacccctacttcagacgtgctggtgtttgactacactaaacacccttccaaa
ccagaccccagcggtgagtgcagcccagacttgagactcaggggacaccagaaggaaggc
tatggtttgtcctggaaccccaacctaagtggaaacctgctcagtgcatcagatgaccat
acaatttgtctatgggacatcagtggatctcctaaggaaggaaagattgtagatgccaag
actatcttcacaggccatactgcagtggtggaggacgtgtcttggcaccttctccatgaa
tcactttttggctcggttgctgatgaccagaaactcatgatttgggacacaagatccaat
aatacagccaagcctagccacgcagtggatgcccacaccgctgaggtgaactgcttgtcc
ttcaacccctacagtgagttcatcctggccactggttctgcagataagactgtggcgctt
tgggatctacgtaatctgaagctaaagcttcactccttcgagtcgcacaaagatgaaatc
tttcaggttcagtggtcgccccataatgagaccattctggcttctagtgggacagacagg
cgacttaacgtgtgggacttgagcaaaattggagaggaacagtctgctgaggatgctgaa
gatgggcctcctgaattgctgtttattcatggagggcacacagcaaaaatatctgatttc
tcatggaatcccaatgaaccctgggtgatctgctctgtgtctgaggacaacatcatgcaa
gtttggcaaatggctgagaacatctacaacgatgaggaacccgacactcctgcctcagag
ctcgagagtcaagcttcgtaa
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