Astyanax mexicanus (Mexican tetra): 103024053
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Entry
103024053 CDS
T05042
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103024053
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Gene cluster
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
103024053
NCBI-ProteinID:
XP_007232315
Ensembl:
ENSAMXG00000024892
UniProt:
A0A8B9J3Q9
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Position
21:15002355..15023229
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AA seq
867 aa
AA seq
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MKMHVWILPITLLVGASLSLVEMYDSYGEICRNLCTCEEKEGILTVSCENRGIVRLSEIS
PVHFSTYHLLLTGNLLKKLSVNDFINYTGVTILHLGNNDIADVETGAFNGLQGLKRLHLN
NNKIDVLRDDTFAGLESLEYLQIDYNFISIIEPNALSRLHHMTVLILNDNLLSSLPANIF
RNVPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQLEENPWNCSCELIALKAWLESIAYTA
LVGEVVCETPFRLHGRDLDEVSKQELCPRRAISEYEMRPPPPLSTSGYFQTTPAVVTASA
TSSAVLRSSSRPTKGTRQSNRTRSKPTTRIPANPYNYGPIIAFQTKSPVPLDCPTACTCN
LQISDLGLNVNCQERKIESISDLKPKPYNPKKMYLTGNYIPIVRRSDFVEAEGLDLLHLG
NNRIALIQDRAFGDLIGLRRLYLNGNLIDRLTAEMFFGLHNLQYLYLEYNKIREIVGGTF
RFVPNLQLLFLNNNLLKTLPGGIFSTLSLARLNLRNNHFQNLPVSGVLDQLKALVQIDLF
ENPWDCSCDVVGMKIWLEQLNSGTVVNDVVCATPKRLAGKDMRGVLAELLCPDYSDIVVS
TVAPSEEPLAGRITTTEMPLRYNTPTSTVPLSVLILSLLLVFIMSVFVAAGLFVVVMKRR
KKSQSDRTSTNNSDVSSFNLQYSLYSNRSVPKVKPPAGHVYEYIPHPLGHMCKNPIYRSR
EGTAVEDYPDLHELKVVSYRNTPEDERDPTLRSPNYTVSTIEPREEPSTVQDAEHFFRGI
LEPDKATPSSTGSRYEYKYPSPGAYTYNPNFDVRRQYLHPETVLYGTAPSTVYVEPNRNE
YLELKAKLQVEPDYLEVLEKQTTFSQF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcatgtctggatactgccgattacactgctggttggagcttctctaagcctg
gtggagatgtacgacagttatggggagatctgcaggaatctgtgcacttgcgaggaaaaa
gaaggcatcctgaccgtcagctgcgagaacaggggcatcgtcaggctgtcggaaatcagc
ccagtgcatttctccacctaccacctcctgctgacgggcaacctgcttaaaaagctgtcc
gtcaacgacttcattaactacaccggagtcaccattttgcatctgggcaacaatgacatc
gccgacgtggagaccggggcatttaacggactccagggattaaagaggttgcacttgaac
aacaacaaaatcgacgtgctaagggacgatacatttgctggattagagagtctggaatac
cttcaaattgattacaattttattagcatcatcgagcccaatgctctcagcaggctccac
cacatgaccgtgctcattctgaacgacaacctgctgtcgtctctgcccgcgaacattttc
cgcaacgtgcccttgacccatttggacctcaggggaaacaggctgaaaatgttcccgtat
atcggtcttctggagcacatggacaaagtggtggagttacagctggaggagaacccgtgg
aattgttcgtgcgagctgattgcactcaaggcttggctggagagcatcgcgtacacagcg
ttggtcggggaggtcgtttgcgagactccctttcggctgcacggccgagaccttgacgaa
gtttccaagcaggagctttgtcccagaagagccatttcggagtacgagatgcgtccgccg
cctcctcttagcactagtggatatttccagacgactccagccgtggtgacagcctcggcc
acttcctcggccgtgctcagatcctcctccagacccaccaagggcacccggcagtccaac
aggaccaggtccaagcccacgactcgcatcccggccaacccttacaactacggacccatc
atagctttccagaccaaatcccccgtgcctttggattgtcccacggcctgcacgtgcaac
ctgcaaatctctgacctcgggctgaatgtcaactgccaggagaggaagattgaaagcata
tcggatctaaagcccaagccatacaatcccaaaaagatgtacctcacagggaattacatc
cccatagtgcgcagatcggatttcgtggaagccgaaggattggatttgttgcacttggga
aacaatcggatagcgcttatacaggacagggctttcggggatttaattggcctacgcagg
ctttacttgaatggcaatttgatcgacaggctcactgcagaaatgttctttgggcttcac
aacctgcagtacctgtatttggaatacaacaaaatccgggagattgtgggaggtacgttt
cgtttcgtgcccaacctgcagctgctgttcctcaacaacaaccttctcaaaaccttgcct
ggaggcatcttttccactctgtcgctcgccagactcaacctgcgcaacaatcacttccag
aacctgcccgtgagcggggttctggaccagctgaaggctttggtgcagatcgatctgttc
gagaacccatgggattgctcttgcgacgtggtagggatgaaaatatggctggagcagctc
aactccggcaccgtggttaacgatgtcgtttgcgcgactccaaagaggctggccggcaaa
gacatgcgcggagtccttgctgagcttttgtgcccggattattcggatatagtcgtttcg
accgttgctccttctgaggaaccgttggcgggcaggatcaccaccacggagatgccactg
aggtacaacacccctacgagcaccgtgccgctgtccgtgctcatcctcagccttctcctg
gtcttcattatgtctgtgtttgtggctgctgggctgtttgtagtggtcatgaagcggcgc
aagaagtcgcagagtgaccgcaccagcaccaacaactcggatgttagctccttcaacctg
cagtacagcctctacagcaaccggtctgttcctaaggtcaagcctcccgccggccatgtc
tacgagtacatcccgcatccgttgggccacatgtgcaagaaccccatctacaggtccagg
gagggcaccgctgtcgaggattaccccgatttgcatgagctgaaggtggtcagctatagg
aatacgcccgaagacgagcgggatcccaccttgcggagcccgaactacacggtcagcacc
atcgagcctcgggaggagccgtccacggttcaggacgccgaacatttcttcagagggatc
ctggagccggacaaggccacacccagcagcactggaagtaggtacgagtacaagtacccc
agtcctggagcgtacacgtacaacccgaatttcgacgtcaggcggcagtacttacatccc
gagactgtgctgtacggcacggcgccaagtactgtctacgtggagcccaacaggaacgag
tacttggaactaaaggcgaaactccaagtggagccggactacctcgaagttcttgagaaa
cagaccacgtttagccagttttaa
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