Astyanax mexicanus (Mexican tetra): 103024110
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Entry
103024110 CDS
T05042
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103024110 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103024110 (mybpc1)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103024110 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
Ig_DSCAM-DSCAML_C
V-set
Ig_CYK3_C
GCP6_N
PHD_4
Motif
Other DBs
NCBI-GeneID:
103024110
NCBI-ProteinID:
XP_022527402
Ensembl:
ENSAMXG00000037531
LinkDB
All DBs
Position
2:37194229..37244317
Genome browser
AA seq
1320 aa
AA seq
DB search
MPEPTKKDDGQPEENVAPGTGEALPPAEISLEVSPPEAAAEVKDPEPIVTVPEQEPVAPE
VLEPQPIITEIIEPQPVVAEVTESQPIVTEPVEHGQAEPEPTQDVVMVQVCEFKEETTIL
SPAPPMNDAVKAAGTIPIVMVVPPPTPILKDKDDDITASTPSPPPPSEDGSTYKKLSVDL
PNDSVPESAMGRKDSVWSLGDGQPPEDIDKQIETPPLSTLLIEKPQGGSITVGGDITFIA
KVEAKDLLRKPTIKWFKGKWMDLASKTGKHLQLKESFDRFTKIHTFEMHIIKAKENYAGN
YRCEVTYKDKFDSCSFDLEVKDIPEVSQSIDIRSAFKRSSEGQEDAGELDFSGLLKHREP
KQEEAPEVDVWEILKNARPDEYEKIAFTYGITDLRGLLKRLKKTKKEEKKSEAFAKKLDP
AYQVDKGGKIRLIVDMADPTVDLKWYKNGQEIRPTPNNRKYIFEHKGTQRILVINNCQIN
DDAAYSVTAGEEKSTTELFVKELPIKIVKELEPVKTTVNERIELECEVSEEGAKVKWMKN
GVEVPTGVRSRYRVKCEGTKHWLIIDDAIKEDTATYSLMATGGTTEARVQVDLKPLKILQ
DLQDITIKLGQPMKLHCEILPVNVPGRWYRNGQLIQPSERLTILHRAKTHRLEVESCTLH
DAGDYTFVPEGYSQSLSAKVHIIDPPRVHLEALNAPDNTVTIVAGNKLRLEIPISGEPAP
RVVWMKGERVILDTGSRVRAETFPDHTCLTIDVTEREDSGNYKIVLQNEAGEDTASVKVK
VVDIPDAPGAPLVPVVGGDWCSMTWDPPYYDGGSPILGYFIERKKKQSSRWMRLNFDLCK
ETTFEPKKMIEGVPYEVRVFAVNAIGVSKPSEPSKAFVPLAVTSEPTMLIVDDVTDTTVT
MKWRPPETIGAAGLDGYQIEYCIEGTDDWVVANKELIEKTKFTITDLPPEGKILVRVKAI
NAAGASQPRTTQHSILVKEVIEPPKIRIPRHLKQTYTRMVGEVVNLVVPFVGKPRPKVTW
LKDDQPVEPKQVSIRNSDCDSIIFIRKAERKHSGKYHMTVQVENHVDTAVVDIQIVDLPG
PPQCVRIEEVWGENVALDWTPPKDNGNAPITGYTIQKADKKTMEWYTCVEHYHRTCITIG
ELVVGNEYFFRIFSENMVGLSESATTTKDSAVIVKEGMYLKNPEYIDYDFTEAPKFTQPL
INTFAIAGYNASLNCSVRANPRPKVIWMKNKITILDDPRYRMFSNQGVCTLEIRKPSPFD
GGVYTCKAINELGEAQVDCKLEVKGGFTFFELMKRGVPLHLIDKYMNETKSSESEKKGSD
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcccacaaagaaagatgatggtcaacctgaagagaatgttgcaccaggcact
ggggaggccctgcccccagccgagatttctcttgaggtgtctccaccagaggctgcagcg
gaggtcaaagacccagagcccatagtgactgtaccagaacaagaaccagtagcacctgag
gtcctagagccacagccaataataactgagattatcgagccacaaccagtagtggcagag
gtcacagagtcgcagccaatagtgacagagcctgtagagcatggacaggcagagccagaa
cccacacaagatgttgtgatggtacaagtgtgtgaatttaaggaggaaactaccattctg
tctccagccccacctatgaatgatgcggtgaaggctgctggtacaatcccgatagtcatg
gtggttccccctcctacccccatcctcaaagataaagatgatgatatcactgccagcact
ccatctcctcctcccccatcagaggatggcagtacatacaagaaactttctgttgatctt
cctaatgatagtgtccctgagtcagccatggggagaaaagactcagtgtggtctttgggg
gacggacagccgcctgaggacattgataagcagatagaaactcctcctctttccacttta
ctgattgaaaagcctcagggtggttccatcactgtaggtggagacattaccttcattgca
aaggttgaggccaaggacctgctccgtaaaccaactatcaaatggttcaaggggaaatgg
atggatctggccagcaagacaggcaagcacctgcagttgaaggagagttttgatcgcttt
accaagattcacacatttgagatgcatatcatcaaggctaaggagaattatgctggaaac
tacagatgtgaggtcacctataaggataagtttgacagctgctcttttgacctggaggtg
aaagatattccagaggtgtctcagagtattgatattcgttcagcctttaaaagaagcagt
gaaggccaggaggatgcaggggagcttgactttagtgggcttctcaaacatagagaacca
aagcaggaggaggcaccagaggttgatgtctgggagatcctgaaaaatgcccggccagat
gagtatgaaaagatcgccttcacctatggcatcactgacctccgtggactgttaaagagg
ttgaagaagacaaagaaggaggagaagaagagtgaagcttttgccaagaagctagaccct
gcatatcaggtggacaaaggtgggaagatacgattaatagtggacatggctgacccaact
gttgacctgaaatggtacaagaatggtcaggaaattcgtcccactcctaataataggaag
tatatctttgagcacaagggtacacagcggatcctggtcatcaacaactgtcaaataaac
gatgatgctgcgtattcagtgactgcaggagaggaaaagtctactacagagctgtttgtg
aaggagttgcccataaagattgttaaagagctggaacctgtgaagactacagttaatgaa
cggatcgagttggagtgtgaagtgtcagaggaaggagcaaaggttaaatggatgaagaat
ggggtggaggtaccaacaggagtgcgctcaaggtatcgcgtaaaatgtgaaggaaccaag
cactggctgattatagatgatgctataaaagaagacacagccacatattccctcatggct
actggaggcaccactgaggcccgcgtccaagttgacttgaagcctctgaagattctgcag
gatctacaggatataacaataaaattgggccagccaatgaagttgcactgtgagatctta
cctgtaaatgttcctggacgctggtacaggaatggtcagctcatccagcccagtgaacgt
cttaccattctgcacagagccaagacccacaggttggaggttgagagctgcactcttcat
gatgctggagattacacatttgtgcctgaaggttattcacagagcctcagtgccaaggtt
cacatcatagatccccctagagtgcatttggaggctctgaatgctccagacaacactgtt
accatagtggctggaaacaaactgcgcttggagatccccatcagtggagagcctgctccc
agagtggtgtggatgaaaggagagagggtcattcttgacacagggagtcgagtccgtgcc
gagacgtttcctgaccacacatgcctcaccattgatgtaactgagagagaagacagtggc
aactacaagattgtgctgcagaacgaagcaggagaagacacagccagtgttaaggtcaag
gttgtggatattcctgatgcccctggggctcccttggttcctgtagttggtggggactgg
tgttcaatgacatgggatcctccctattatgatggtggatctccaatcctaggatacttc
attgagaggaagaagaaacagagctctagatggatgagactaaactttgacctctgcaaa
gaaaccacattcgagcctaaaaagatgattgaaggagtgccgtacgaggtgcgagtcttc
gctgttaatgccatcggtgtgtccaaacccagtgaaccctccaaggcttttgttcccctt
gctgtcaccagtgaacccacaatgctgatagttgatgatgtcacagacacaactgtaaca
atgaagtggcgtcccccagaaactatcggtgctgctggtttggatgggtaccaaatagag
tactgcattgaaggaacggatgactgggtagttgccaataaggaattgattgagaaaacc
aagttcaccataacagacctgcctcctgaaggcaagatcctagtgcgagtgaaggctatt
aacgctgctggagccagccaaccccgcaccacacagcactccatcctggtcaaagaggtt
attgagcctcctaagattcgcatacctcgccatctgaagcagacatacacacgcatggtc
ggagaagttgtcaaccttgttgtgccgtttgtgggcaaacccaggccaaaggtcacctgg
ctgaaagacgaccagcctgttgaaccaaagcaagtcagtattcgcaactcagactgcgac
agcattatcttcatccgcaaggctgagcgcaagcactctgggaaatatcacatgaccgtt
caggtggagaatcatgtggatacagctgttgtggacatccagatagtagaccttcctggt
cctcctcagtgtgttagaattgaggaggtctggggggagaacgtagctctagactggacg
cccccaaaggacaatggcaatgcccccataacaggatacactatccagaaggcagacaaa
aagacaatggagtggtacacctgcgtggagcactaccaccgcacctgtatcactattggt
gagctggttgtaggcaacgaatacttcttcaggatcttctctgagaacatggtgggctta
agtgagagtgccaccaccactaaagacagcgcagtcattgtgaaggaaggcatgtacctg
aagaacccagagtacattgactacgatttcacagaggctcccaagttcacccagcctctt
atcaacacctttgccatcgccggctacaacgcctcccttaactgcagtgtccgtgcaaac
ccacggccaaaagtgatttggatgaagaataagattaccatcctagacgacccacgttat
cgcatgttcagtaaccagggtgtgtgcactctggaaatccggaagccgagcccatttgat
ggaggtgtgtacacttgcaaggccatcaacgaacttggtgaggcacaggtggactgcaaa
ctggaggtgaaaggaggctttacgttctttgagctgatgaagcgtggcgttcccttgcat
cttattgataagtacatgaacgagacaaagtcctcagagtctgagaagaagggatctgac
tga
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integrated database retrieval system
