Astyanax mexicanus (Mexican tetra): 103024138
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Entry
103024138 CDS
T05042
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103024138
04812 Cytoskeleton proteins [BR:
amex04812
]
103024138
Cilium and associated proteins [BR:
amex03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
103024138
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
103024138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
LRR_LRWD1
LRR_EndoS
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
103024138
NCBI-ProteinID:
XP_022535553
Ensembl:
ENSAMXG00000020887
LinkDB
All DBs
Position
9:38737631..38815889
Genome browser
AA seq
804 aa
AA seq
DB search
MRSNKQQGSTPGHCLTPTVNSYKLHIAAVKSLLPERLLQRPLEMRLSKDPTKANMNVLRA
NPPRPDSRLSMYYRPYHSPMLAFVNEFVRSERVLLPPPATAHSGVMGDLGAQAHRGKVQR
AIRSAGAIYSHSKAPPIPQNAGDAVLLNERPSPGFPISFCSRDDCTASLDRLDLKCRGLM
EFPHLDGMNKLRLLNLQHNLISDLPHLAHLKRLAFLDLYDNRLTDMSAISSLSALRVLML
GKNRIQRICGLDNLTKLDVLDLHNNQISKMENLSHLSELRVLNLAGNCICRVENLHGLDS
LTELNLRYNHISSVTEVDLLSCLQRLFLSSNSISSFDELACLGLSCSLCELTLDGNPVAQ
ESCYKQAALRCVLPLRLLDMKRITDEERRAVSLVARKEDEKKRESHKHTAHKEKRRLAIR
NAAQQWEGSKNCLELPAQNGAKEDLSPENSPAHCPAQTNGIAQEPSPDELRKDKGSPFTL
SERPAGGSESRFRSTSRPNSPRDPRLQETGGPSVQSLSLSESHVAELDGETVRLFGPGAL
EALERGWGVQTASAVTTITFRYIQFDSIVPTLPRIRLKFPNLVHLIFMETNITRLLQLAA
LAQVRRLEQVTIHPEGNPVVSLTLWRAFLIYRLNHLSLQKINGTEVTLNDVMASERLFGT
LGHVASTETPRCRLLLLLEESRKRQLQFLLEGRGRRAGLSPEELKENGKLLGESMSRALF
NYPSRDCSSESPEESGGEVLERGLMVEQYLKGLVHRASSTSVKGDALHKLWPAVFVEMVR
DSVVEMRDTPAYRRTCLNSLAHSK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctaataagcaacagggcagcacaccaggacactgtttaacacccacggtcaac
agctacaagctacacattgcagctgtaaagtctttgctacctgaaagactcttacaaaga
cctcttgagatgcggctttcaaaggacccaacaaaagctaacatgaatgtcttgagagct
aatccacccaggccagatagcaggctgtccatgtattacagaccctaccattccccgatg
ctggcctttgtgaatgagtttgtgaggtcagagcgagttctattgccacctccagcaact
gcccactctggagtaatgggggacttgggggctcaagcacataggggaaaggtccaacga
gctattcgcagtgctggggccatctactcccacagcaaagctcctcccatcccacaaaat
gcaggtgatgcagtattgctgaatgaaaggccatctccaggatttcccatcagtttctgc
tccagagatgactgtacagccagccttgacagactggatctgaaatgtcgtggtctgatg
gaatttccacacctggatggaatgaataagctccgcctcctcaacctgcagcacaacctc
atatctgacctcccacacctggcacacctgaagcggcttgcattccttgatttatatgac
aaccgcctgaccgacatgtcagccatctcctctctctctgcgctccgggtgctcatgctt
ggcaagaacagaattcaaagaatatgcggcctggacaacttgaccaaactcgatgtgctg
gacttgcacaataaccagattagtaagatggagaacctgtctcacctgtcagaactgcgt
gtgctcaacctggcaggtaactgcatctgcagagtggagaacttgcacggcttggactca
ctgacagaactcaacctcagatacaaccatatctctagtgtgacggaggtggacctgctg
tcctgtctccagcgcctgtttctcagctccaacagcatcagcagttttgatgagctggcc
tgtctgggactctcctgctctctgtgcgagctcaccctggatgggaacccagtagctcag
gagtcatgctacaaacaggccgcgctgcgctgtgtgcttccactccggctcctggacatg
aagcgcatcaccgacgaggagagacgcgcagtgagtcttgtagcgcgaaaggaggatgag
aagaagcgcgagagccacaagcacactgctcataaggagaagcgtcgcttggcaatccgc
aatgcagcgcaacagtgggaaggatccaagaactgtctggagcttcctgctcaaaacgga
gccaaggaagatctcagccctgagaacagccccgcccactgccccgcccagaccaatggc
attgctcaagagccttcacctgacgagctgagaaaagacaaagggagtccattcaccctt
tcagagcgtccagcagggggcagtgagagtaggttccgttcaaccagccgccccaacagc
ccccgagaccccagacttcaggagacggggggtcctagcgtgcagagtctgtcgctgtcg
gagagccatgtggctgagctggatggggagacggtgcgtctgttcggccctggagccttg
gaggctctggagaggggctggggggtgcagactgccagcgctgtcaccaccatcaccttc
cgctacattcagtttgatagcatcgtccccaccctgcctcgcatccgcctcaaattcccc
aacctagtgcatctgatcttcatggagactaatataacacggctgctgcagttagctgct
ttagcgcaggtccggcgactggaacaggtcaccattcacccagaggggaatccagtagtc
agcctgactctgtggagagccttccttatctacagactcaaccacctcagcctgcagaag
atcaatggaactgaggtgaccttgaatgatgtcatggcgtcagagcgcctttttggaact
ctgggtcacgttgcttccacagaaactccacgctgtcgtttgttgctgctactggaagag
tctaggaagaggcagctgcagttcctgctggaggggaggggtcgcagggctggtttgagc
cctgaggagctgaaggaaaacgggaagctgctgggagagagcatgagccgggcgctcttt
aactaccccagcagagactgcagctccgaaagccctgaggaaagtggaggtgaggttctg
gagcgtgggctgatggtggagcagtacctgaaagggttggtgcacagagcttccagcacc
agtgtaaagggggacgctctgcataagctgtggcccgctgtgttcgtggagatggtgagg
gactcggtggtagagatgagggacacgccagcctacagacggacctgcctgaactcgctc
gcccacagcaaatga
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