Astyanax mexicanus (Mexican tetra): 103024195
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Entry
103024195 CDS
T05042
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103024195 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103024195 (vps35)
Membrane trafficking [BR:
amex04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
103024195 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
103024195
NCBI-ProteinID:
XP_022521684
Ensembl:
ENSAMXG00000018517
LinkDB
All DBs
Position
23:28243054..28326458
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AA seq
796 aa
AA seq
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MPTTHQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQSEEEMTGDINDSI
DFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKYKQ
IVLAGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRACADLHQNVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKH
FPPLFEYFDYESRKSMSCYVLSNTLDYNTTIVAQEQVDAILNLVSTLIQDQPDQPAEDPD
PEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQLA
FRYKDNSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSGRNTDKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYVCFYERENDAVTVQVLNQLISKIREDLPNLEASEETEQINKHFHNTLEHLRLQ
RESPESEGPAYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccactcatcagtcaccccaggatgagcaggagaagctgctggacgaggcgatc
caggcggttaaagtacagtcatttcagatgaagcgctgcctggacaagaacaagctgatg
gacgcactgaaacatgcctcgaacatgctgggggagctccggacctccatgctctctccc
aagagctactatgaactctacatggccatttctgatgagctgcactacctggaggtctac
ctgactgatgagttcgctaaaggtcgtaaggtggctgacctgtatgagctggttcagtat
gctggtaacatcatccccagattgtatcttttgataacagttggagtggtgtatgtgcgc
tcgttccctcagtcccggaaggacattttgaaggatctggtggagatgtgcaggggggtg
cagcaccctctccgcgggctgttcctcaggaactacctgctgcagtgtacccgcaacatc
ctgcctgatgatggggaacagtctgaggaggagatgaccggagacatcaacgactcgatt
gactttgtcctgctgaactttgctgagatgaataagctgtgggtgcggatgcagcatcag
ggccacagcagagaccgggagaagagggagaaggagaggcaggagctgcgtatcctcgtg
ggaacaaacctcgtccgcctcagccagctggagggagtcaacgtagagaaatacaaacag
attgtgctggctggagttctggagcaggtggtgaactgccgagactctctggcacaggag
tacctcatggagtgcatcatacaggtcttcccagatgagttccacctccagaccctgaac
ccgttcctccgtgcctgtgccgatctgcaccagaacgtcaacgtcaagaacatcatcatc
gccctcattgacaggttggctctgtttgcccacagagaagatgggcctggaatccctgct
gaaatcaagctatttgacattttctcacagcaagttgcgacggttattcagtctcggcag
gacatgccctcggaggacgtggtctcgttgcaggtgtccctcattaacctggctatgaag
tgctaccccgaccgcgtggactacgtggacaaggtcctggagagcactgtggagatcttc
aacaagctcaacctggagcacattgcgaccagcagcgccgtttccaaggagctgaccagg
ctattgaaaattcccgtggacacctacaataacatcctgactgtgctgcagctcaaacac
ttcccaccgctcttcgagtatttcgattatgagtcacgcaagagcatgagctgctacgtc
ctcagcaacaccctggactacaacaccaccatcgtggcccaggagcaggtggatgccatc
ctgaacctggtatccacactgatccaggaccagccggaccagccagcagaagacccagac
ccagaggacttcgctgaggagcaaagcctggtgggacgcttcatccacctgctgcactca
gaggacccagaccagcagtacctgattttaaacacagccaggaagcatttcggcgctggg
ggtaatcagaggatccgctacacgctgccccctctagtgttcgccgcctatcagctcgcc
ttccgctacaaagacaactcgtcctcggatgataaatgggagaagaagtgccagaagatc
ttctccttcgcccaccagaccatcagcgcgctgataaaggccgagctggccgagcttccc
ctcagactcttcctgcagggggcgctggccgccggggagatcggcttcgagaaccacgag
accgtggcgtacgagttcatgtcccaggctttctctctgtatgaagatgagatcagtgac
tctaaagcccagctggctgccattaccctcatcatcggcacgttcgagcgcatgcgctgc
ttcagcgaggagaaccacgagccgctgcgtacgcagtgcgccctggccgcctccaagctg
ctgaagaagcctgaccagtgccgggccgtcagcatctgcgcacacctgttctggtccggc
cgcaacaccgacaagaacggagaggagatccgtgatgggaagcgtgtgatggaatgcttg
aagaaggctctgaagattgcgaaccagtgcatggacccgtccctgcaagtgcagcttttc
atcgagatcctcaatcgatacgtctgtttctacgagcgagagaacgacgcggtgaccgtt
caggttctgaaccagttgatctccaaaatccgcgaggacctgcccaacctggaggccagc
gaggagacggagcagatcaacaagcacttccacaacacactggagcacctgcgcctgcag
agagagtcgcctgaatccgaggggccggcgtacgagggtctcgttctgtag
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