KEGG   Astyanax mexicanus (Mexican tetra): 103024200
Entry
103024200         CDS       T05042                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103024200 (larp1b)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103024200 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 103024200
NCBI-ProteinID: XP_022528437
Ensembl: ENSAMXG00000006805
LinkDB
Position
14:complement(35302960..35370446)
AA seq 1116 aa
MSTVDSAARDGEQNRGDAAAKLDLPEEEPEKMCEGEQNDATEKENEPSTTSQDTREAENS
KARVREAPPPKVNPWTRKSGGSSSTCPSSAHTDFQNPAKVVCASKPRSRKSSKSSDFSDI
TNWPTPGEIANKELQQNVINTQGRKLSTGRRERRRDRGGEKREKESGSDGSDSKENREAQ
EEPLTHLPTEEGKDISKDMQNSTTRRRGGWRREREFFDDASSIRSEGSSVRGSLRGRGKG
RGRGRGRGRGRYDYSHSYRDSFLDSSAMPQDFGTNMMYFYDDGNRVQMYTIEESLLKEYI
KRQIEYYFSLHNLERDFFLRRKMDSKGFLPISLIAGFRRVQALTTDINLIIEAVKNSDVV
ELVDEKMRRKEDPEHWPIPGLPVDSPRTDFTQLIHCPEFVPGQTFTCLNAVSTSPANNIT
VEPTPTTNGQLNDSSDTEVKPQTSKSPTEPKNVSSTAERTPAGLCNNTPDADTPKGLSSS
LPDHESHWIQVEKRQRNSSGKTKQTVILHHLSPLPQSEPSAVIERSEPVRSSPNQQPEAD
QEELDFLFDEEMERLAAPRKNTFTDWSDDDSDGELDDRDVNKILIVTQTPPHLRKHPAGD
RTGNHVSRAKITAELAKAINDGLYYYEQDLWTEEDKQLDSTNIKEVENFKKISVISQDTF
ETLTPKLPVEPNQEVPPPPPPCQDESSLAHSFPTNVPESSSAPRTPRTPRTPGRQDPTKT
PRFYPVIKDSGNIDGKTPRKRKTRHSSNPPLESHVGWVMDSREHRPRTNSVSSSNASPSE
GAPLQSGSYSCTPQSLPKFWHPSHELLQENGFTQQVYHKYRRRCLNERKRLGVGQSQEMN
TLFRFWSFFLRDNFNRRMYEEFKQYAVEDAKENYRYGLECLFRFYSYGLEKRFRPEIFKE
FQEETLNDYEKGQLYGLEKFWAFLKYSHVKNQVIDPKLQECLSKFKSIDDFRVEPPIGEE
GGRRRRHSSSGGDEGRRKRHNSSSSSSKLAPPTKPSNRPAVATLAAKMDNNSRSASPGNT
KNDLANQGPAKAAPANQPTSTANTKTISTNNPAAIGPSKVASASQKTSAKSSTGASDLTA
AVKANPKENMKKSLQPDAHKGEPATSKTKDDSQPNK
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgtccaccgtcgactcggccgcgagggacggcgagcaaaacagaggcgacgccgccgcc
aaactcgaccttcccgaggaggaacccgagaaaatgtgcgaaggagaacaaaacgacgcg
acggagaaggagaacgagcccagcacgacgagccaagacacgagagaagcagaaaacagc
aaggcgagagtgcgggaggctccaccgcccaaagtgaacccgtggacgaggaagagcggc
ggcagcagcagcacatgtccttccagcgcccacactgacttccagaacccagccaaagtt
gtgtgtgccagcaagcccagatccaggaagtccagtaagtcaagtgacttcagtgacatc
acaaactggcccactcctggagagatagccaacaaggagctgcagcagaacgtgattaac
acacagggcaggaagttgtcgacaggacggagggagaggaggagggatcgtggaggagaa
aagagggaaaaggagagtggcagtgatggaagtgacagtaaagagaacagggaggcgcaa
gaggagcctctaacacacctccccacggaggaggggaaggacatcagcaaagacatgcaa
aacagcaccactcgcaggagaggaggctggaggagagagcgagagttctttgacgatgca
tccagcatccgcagcgaaggcagcagcgtccgtggcagccttagggggcggggcaaaggt
cgcggcaggggcagaggtcgtggtcgaggtcggtatgactactcacatagttaccgggac
tccttcttggatagttctgccatgccccaggatttcggcaccaatatgatgtatttctat
gacgacggtaaccgggtacagatgtacaccatcgaggagagtctgctgaaagagtacatt
aagcgccagattgagtattacttcagcttgcataacttggaacgagactttttcttacgg
aggaagatggactccaagggcttcctgcctatctctctgattgctggcttccgccgtgtc
caggccctgaccaccgacatcaacctcatcatagaggctgttaaaaacagtgatgtggtg
gagctggtggatgagaagatgaggagaaaggaggacccggagcattggcctatccctgga
ctcccagtcgactcccctcgcacagatttcactcagcttatacactgccctgagttcgta
ccgggacagaccttcacctgcctgaacgcagtctcaacatccccagccaataacatcaca
gtcgagcccacccctactaccaacggccaactaaacgacagctccgatacagaggtcaaa
ccccaaactagcaagtcaccaactgagcccaaaaatgtgtccagcacagctgaaagaaca
cctgcagggctgtgcaacaatacgcctgatgcagatactccaaaaggcctgtccagcagt
ctgcccgaccacgagagccattggatccaggtggaaaaacggcaaagaaactcctccggg
aaaaccaagcaaactgtaattcttcatcatctttctcctcttcctcagtctgagccttct
gcagttatagagcgctctgaaccggtccgctccagtccaaaccagcagcctgaggccgac
caggaggagctggacttcttgtttgatgaagagatggaacgactggcagcacctcgcaaa
aacaccttcaccgattggtcggatgatgactcagacggtgagctggacgacagagatgtg
aacaaaatcctgattgtgacgcaaactccgccacacctgcggaaacacccggccggcgac
cggaccgggaatcacgtctctcgcgccaaaatcacagctgaacttgccaaggccatcaac
gacggtctctattactacgagcaggacctgtggacagaagaggacaagcagttggacagc
accaacattaaggaagtagagaactttaagaagatcagtgtgatcagtcaggacacgttt
gagactttgacccctaaactgcctgtcgaacccaaccaagaagtgccccctccacctcct
ccctgccaagacgaatccagcctggcccattcattccccaccaatgtcccagaatcctcc
agtgctccacggaccccccgaaccccacgcacacccggtcgccaagacccgacaaaaaca
ccccgcttttatcctgttattaaggacagtggcaacattgatggaaagactccccggaag
aggaaaacccgacacagctccaatcctcccctggagagccatgtgggctgggtgatggac
tccagagagcacagaccccgcactaattctgtcagtagttctaatgcctctccatcagaa
ggcgcccccctgcagtcaggtagttatagctgcacccctcagtctttgcccaagttctgg
cacccgtcccatgagctgctccaggagaatggcttcacccagcaggtttaccacaagtac
cgccggcgctgccttaatgagagaaaacggttgggtgtgggtcagtctcaggagatgaac
acactcttcaggttctggtccttcttcctcagggacaactttaacaggagaatgtatgag
gagtttaaacagtatgctgtggaggatgccaaagagaactacaggtacggattggaatgt
ctgttccgcttctacagttacggtttggagaagaggttcagacctgagatctttaaggag
tttcaggaagaaactttaaacgactatgagaaaggtcaactgtacggtctagagaagttt
tgggctttcctgaaatactcccatgttaagaaccaggtcattgaccccaagcttcaggag
tgcctcagcaagttcaagagcatagacgacttcagagtggagccgccaataggggaggag
ggaggcagaagacggagacactcgtcctctggaggtgacgaggggagacgaaaacgtcac
aactcttcgtcatcatcttcaaaactggccccacccacaaagccttctaatcggcctgct
gttgctactttagcagccaagatggataataacagccggtcagcttctccaggcaacact
aaaaatgatttggccaatcaagggccagcaaaggcagccccagccaatcagccaacatcc
acagccaataccaaaaccatctcaaccaataacccagctgctatagggccctccaaagtg
gcctcagccagtcagaaaacatctgccaagagctccactggggccagcgatctgactgca
gccgtaaaggccaatcccaaagagaacatgaagaaaagtctgcagcctgatgcacacaag
ggagaaccagcgaccagcaaaaccaaagatgacagtcagccaaataaataa

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