Astyanax mexicanus (Mexican tetra): 103024206
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Entry
103024206 CDS
T05042
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b
KO
K08533
RAR-related orphan receptor beta
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103024206 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103024206 (rorcb)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103024206 (rorcb)
Nuclear receptors [BR:
amex03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
103024206 (rorcb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7240
Motif
Other DBs
NCBI-GeneID:
103024206
NCBI-ProteinID:
XP_007242005
Ensembl:
ENSAMXG00000015029
LinkDB
All DBs
Position
4:complement(25630710..25659170)
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AA seq
492 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQLSQDCLSGLAGGLPGGLP
REHEEAGEDSGHSRSYSSGGSSAALSDLDDIATLPDGLLFDLPLTPGEAGEYCGLDLLDG
GVGGGAGSAGSGSSSNQSSPEPSIMDMAEVERVKHEYQLLPEPSILTHTLLGALPDSCSL
LDIEQITQNVVKSHVETCQYTSEELKRFTWNLYSPEETRSFQLKSAEWMWQQCALHITNA
IQYVVEFAKRISGFMDLCQNDQIILLKAGCLEVLLIRMCRAYNSANNTMFFDGKFASPQL
FKALGCDDLVNAVFELAKNLCRLQLSEEEMALFSAAILLSPDRPWLTDSQQVQKLQEKVY
VALQHSLHMSGANPEKLDKMVSKLPQMKSICNLHIDKLEFFRLVHPETAYSFPPLYREVF
GSEITFPDSTDS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccgtgtaagatctgcggggacaagtcctccgggatc
cattatggtgttatcacctgcgaaggctgcaaggggttttttcgccgcagccagcagaac
aacgctatgtactcgtgctctcgacagaggaactgcctgatcgatcgcaccaaccgcaac
cgctgccagcactgccgcctgcagaagtgcctggctctgggcatgagccgagatgcggta
aagttcggacgcatgtctaagaagcagcgggacagtttatatgcggaggttcagcggcac
cagcagctctcccaggactgtctgtcagggctggcagggggtcttcccgggggtctgccc
cgggagcatgaggaggccggtgaggacagtggacacagccggtcgtacagcagcggcggc
tccagcgccgccctgagtgacctggacgacatcgccactctgcccgacggcctgctgttc
gacctgccgctcaccccgggcgaggcgggcgaatactgcggcctagacctgctggacggc
ggggtggggggcggagccggaagtgcaggcagcggcagctcgtccaatcagagctctccg
gagcccagcatcatggacatggctgaagtggaaagagtgaagcacgaatatcagctgctg
cctgaacccagcatcctcacccacacgctgctgggagcgctgcctgacagctgctcactc
ctcgatatagagcaaattacccagaatgtggtgaagtctcatgtggagacgtgtcagtac
acctcagaggagctgaagcgcttcacttggaacctgtactcacctgaagaaacccgctcc
ttccagctaaagtctgctgagtggatgtggcagcagtgtgccctgcacatcactaacgcc
atccagtatgtggtggagttcgccaagcgcatcagcggcttcatggacctgtgccagaac
gaccagatcatcctcctcaaagcaggatgtttggaggtgctgctgattcgtatgtgtcgt
gcatacaactccgctaataacaccatgtttttcgacggcaagttcgccagccctcagctc
tttaaagcactgggctgtgatgacctggtgaatgctgtatttgagttggcgaagaatctg
tgccgtcttcagctgagtgaggaagagatggcgctgttcagcgctgctatcctgctgtca
cctgaccggccctggttaacagacagtcagcaggtgcagaagctacaggagaaggtgtat
gtggcgctgcagcacagtctgcacatgtcaggagcaaacccagagaaactggacaagatg
gtgtctaaactaccacagatgaagtccatctgtaacctccacatcgacaagctggagttt
ttccgcctggtccatcccgagacggcctacagcttccccccactctacagggaagtgttc
ggcagcgagatcaccttccccgactccaccgacagctag
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