Astyanax mexicanus (Mexican tetra): 103024264
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Entry
103024264 CDS
T05042
Symbol
prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18 isoform X1
KO
K12817
pre-mRNA-splicing factor 18
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103024264 (prpf18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103024264 (prpf18)
Spliceosome [BR:
amex03041
]
Complex C
Other components
Step II factors
103024264 (prpf18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
103024264
NCBI-ProteinID:
XP_007233895
Ensembl:
ENSAMXG00000012848
UniProt:
W5L049
A0A8B9JY89
LinkDB
All DBs
Position
9:15397515..15407982
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AA seq
350 aa
AA seq
DB search
MDILKAEIARKRKLMEEKQLVDSSKKYFKRADLARKEEEEYYKRCGYKVAHEQPVTQVDK
KEEAAPSTSSNPVLELELTEEKLPMTLSRQEVIRRLRERGEPIRLFGESDYDAFQRLRKI
EILAPEVNKGLRNDLKAAMDKIDQQYLNEIVGGQEPGDPDTQHDLKVHEENTTIEELEAL
GASLGTGDDVGDMDVINKVLRFLLGVWAKDLNGREDHVKRSVQGKLASATQKQTESYLEP
LFRKLRKKTLSADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHART
GREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctaaaagccgagatcgcgaggaagaggaagctgatggaggagaaacagctg
gttgatagctcaaagaagtactttaagcgtgctgatctagcccgaaaggaggaagaagaa
tactacaaaagatgtggctacaaggttgctcatgaacagcctgtgactcaggtggacaag
aaggaggaggccgccccatctacttcatccaatcctgtgttggagttggagctcacagag
gagaagttaccaatgaccctgtctcgacaggaggtgattcggcgtctgagggagcgcggg
gagcccatccgtctgtttggagagtctgattatgatgcatttcagagactccgaaagatt
gagattcttgcaccagaagtgaacaagggcttgaggaacgatctgaaggctgccatggat
aaaatcgatcagcagtacctaaatgagattgttggaggacaggagcctggagatcctgac
acacagcatgatctgaaagtgcatgaagaaaataccaccatcgaggagttggaggctctg
ggggcgtctctgggcactggagatgatgtaggagacatggacgtcataaacaaagtgctg
cggttcttgctgggtgtgtgggctaaagacctgaatggaagagaagaccatgtgaagcgc
agtgtacagggaaagctggccagtgccacacagaaacagaccgaatcttacctcgagcct
ctcttcagaaaactacgcaagaagaccttgtctgcagacattaaggaatccatcacagac
atcatcaagttcatgctggagagagaatatgtgaaggcaaatgatgcatacctgcagatg
gcgataggaaacgccccatggcccatcggtgtgaccatggtgggtattcacgctcgtaca
ggtcgtgagaagatcttctccaaacacgttgctcacgttcttaacgacgaaacccagaga
aagtacatccagggtctgaagaggttaatgactatctgtcaaaagcatttccccacagat
ccttcaaaatgtgtggaatacaacgccctctaa
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