Astyanax mexicanus (Mexican tetra): 103024277
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Entry
103024277 CDS
T05042
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103024277
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
103024277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
EGF_TEN
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
103024277
NCBI-ProteinID:
XP_049319930
LinkDB
All DBs
Position
14:complement(13335845..13500448)
Genome browser
AA seq
1856 aa
AA seq
DB search
MERLWFLLLLSLSLSLTTALVRTPRQLRTASRGQSSVKPSPPDQQESKATHTRKLVGPHV
CGGQQCCSGWAVAPGTNRCIKPDCQPPCQNRGSCSRPHTCVCRSGFQGARCEEVAPEQVY
IRTGTSRVLTPVRPGSESSQRQPTRRRPTERQAIDTNTRTHTPKPPTTRLPHSPVTQVRR
GSPDLSPQQTGSSRTVKRYPSSTGPITSNALPNGHSNGNRHGSHGYTHTQHLSSSGGQLR
ESQSNAVSPAGANLTAGVDRIKIIFTPMVCRRTCSGGRCYNSCERGDKTTVYSENQGPAP
KSQGFRLFFCQIPCLNGGRCIGQNECWCPSNSTGKFCHLPAPAPSKATPSRRANSNGAQN
GSSHSMYTLPLSNQQASMLPSLVNVHVQHPPEAEVQIHQVARVKPGQPPDGAHSVQQRSQ
PVNGNGNGVGNGNDHYGVHVNGQNNGHSHQRPHNRHNGYVGRCFQETVDGKCGKPLPGLT
KQEDCCGSVGASWGLNKCTECPSKPAYAVIANGQVECPKGYKRMNSTHCQDINECLMPGI
CKHAECLNTKGSYRCTCKPGYMLDPARSHCVSDKAVSMNKDSCYRTVSAGTCSLPLTLKI
TKQICCCSRVGKAWGTNCEKCPVPDSDHFKEICPAGHGYTYSHSDVQITLRELEDEELSR
VESFFPQIPTYPLPDQIPLEPPHHTPQIPVSPRPPYHHPQTPTRPQPQPGQPPRTAQVPH
HPWTDFQHPVHVSPSLPDADETWNVPTFTDPPLVYPDVREVTPQSPTHLKPESNSRDTAP
INVATQATDIDKCSLTPTICGPGQCVSVQTSYTCYCDPGYKLNGLQTTCIDVNECEDDPC
GEKGHCANSYGSYTCQCFSGFSLLMTQNKKTCQDINECAIPNKCPNGVCVNTEGSFTCEC
KNGFTKNWRGQCEDVDECRSPSVCPGGICVNTQGSFQCQACGPGFKPAGGRCLDINECQA
AGMCANGRCVNTEGSFICTCNHGYQTTARNNSCQDVNECLLPDACPHGTCVNLPGSHRCR
CYTGYQSSPDGKGCEDVDECAHHSLCVEGVCVNTAGSFTCTQCEVGYRLSEDRQRCEDVD
ECLILSMCRNGICLNSEGSFSCVDCPTGYRVSGDGERCDDIDECASPSTCPQGKCINSEG
SYTCIICGPGYRIAANGSCEDIDECQSPEVCPQSGCTNTEGSYSCMNCDPGYRLSSDRHT
CEDVNECEDMAVCPNGHCINTAGSFHCDCPVGFELMDTDCRDVDECAVAEMCSNGQCLNT
DGSYQCLCDSGYRFSTDSKECEDLDECKEYSGVCGTWNCENTLGSYRCFMGCQSGFYGED
NKDCDIDECEDENICGKNGYCENTDGSYRCQCDRGYTNPPEGQGCIDVNECETSSDLCGE
ALCENAEGSFLCICPNENEEFDPVASQCSLRHVEIPVVREPERPAPPPAASDEGQRKECY
YNLNDANLCENVLSHNATKQECCCTVGAGWGDNCEIHPCPVKGQAEYDWLCPRGSGLLSV
VSSVQGYSHLQVTDVDECEMFGPEICKNGICSNYYSTFSCFCRNGYYYDNIRMACVDHDE
CKEENLCEHGKCVNTDGSFNCFCSPPLVLDGTQRNCISINNTDGVHEGLDEDVHTDICWQ
QVKQEICSDPMVGFPTTYTECCCLYGVAWGSQCAFCPKKTSEHFAVLCNLPHRGTDSLRE
RPSFEYGPYEPPYWDNYGPLEGDPYYSPEGPANVPPDSAIDYSSREMVRVPLHRPRVNQP
PRRVDPYRGRNEGFEGLRAEECGILNGCENGRCVRVREGYTCDCFDGYELDLSKMACIDI
NECKDISDSVELCKNGICSNTEGSYKCTCLPGFVASSKPHECIPEVQPPAPHAEGK
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcctgtggtttcttctcctgctgtccctcagcctctcactgaccactgcgctg
gtcagaacccccagacagctgaggacagcgagcagaggccagagcagtgtcaaaccaagc
ccacctgaccaacaggagagcaaagctacacacaccaggaagcttgtggggccacacgtg
tgcgggggtcagcagtgctgttcaggatgggctgttgcacctgggacgaaccgttgcatc
aaaccggattgccagcccccctgtcagaaccgtggctcctgcagccgtccccacacgtgc
gtgtgccgctctggcttccagggagcacgctgcgaggaggtggccccagaacaagtctat
attcgcaccgggacgtccagagtgttgacccccgtccgacctggcagcgaatcctcccag
aggcagcccacccgcagacgacccaccgagaggcaggctatcgacacaaacaccagaacc
cacacgcccaaacctccgaccaccagactgcctcactcacctgtaacgcaggtcagacga
ggctctccagatctttcaccgcagcagactggctcatcgaggaccgttaagaggtaccct
tcatccactggacccatcacctccaatgctctgcccaacggccacagcaatggaaacaga
catggcagccatggatatacacacactcagcatctctcgtcctccggtggccagctgcgt
gagtcccagagcaacgcagtgtctccagcaggagccaatctgacggccggcgtggaccgc
atcaagatcatcttcacgcccatggtgtgtcggaggacctgtagcggggggcgctgctac
aacagctgtgagcgtggagacaaaaccaccgtatacagtgagaaccaaggcccagcaccc
aaaagccaaggcttcagactcttcttttgtcagattccatgtctgaatggaggacgctgc
attgggcagaatgagtgttggtgtccatcaaactccacaggaaagttctgccatcttcca
gctcctgctcccagcaaagctacccccagcagacgggccaatagcaacggcgcacagaac
ggatcctcccactctatgtacaccctgcctctgtccaatcagcaagcctccatgcttccc
tcactggtgaatgtgcatgtccagcaccctccagaggccgaggttcagatccatcaggta
gcacgggtcaaaccaggccaacctcctgatggggcacattcagtgcagcagcgttctcag
cctgtaaacggcaacggcaatggggttgggaatggcaatgaccactatggtgtacacgtc
aatggacagaacaacggacacagccaccagaggcctcataacagacacaatggatatgtg
ggaaggtgcttccaagagacagtggatggaaagtgtgggaagcctttgccaggccttacc
aagcaggaggactgctgtggcagtgtgggggcttcatggggtctgaacaaatgcaccgag
tgtccaagcaaacccgcttacgcagtgatcgccaacggccaagtggaatgtcctaaaggc
tataagaggatgaattcaactcattgtcaagatatcaacgagtgtctgatgcctggcatc
tgtaagcatgcagaatgtctcaacaccaagggtagctacaggtgcacgtgtaagcctgga
tacatgctggatcctgcccgcagccactgcgtctcggataaagcagtgtccatgaataaa
gactcctgctaccggacagtttcagcaggcacatgtagcctcccactcaccctgaaaatc
accaaacagatctgctgctgcagccgagtgggcaaggcctggggaaccaactgtgagaaa
tgccctgtgcctgattcagatcactttaaggaaatctgtcccgcaggccacggctacacc
tactcccattcagacgtgcagatcacactgagagagctggaggacgaggagcttagccga
gtcgagtctttctttcctcagatccccacatatcctctgcctgaccagatccctttagag
cctccccatcacacgccccaaataccagtttctcctcgccctccctaccaccaccctcag
actcctacaagaccacagccgcagcctggacaaccacccagaacagcacaggtccctcat
catccttggactgacttccagcaccctgtacacgtgtctccgtcattacctgatgctgat
gaaacctggaatgtgccaaccttcacagatccacctcttgtatatccagatgtaagggag
gtcactcctcaatcgcccacccacctaaagccagagtctaacagccgggacacagctcca
ataaatgttgccacacaagccacagacattgacaagtgttccctgactccaaccatctgt
ggaccaggccagtgtgtgtcggtgcaaaccagctacacctgctactgtgacccaggctac
aaactcaacggcctgcagaccacctgcatcgatgtgaatgagtgtgaagatgatccgtgt
ggagagaagggacactgtgccaactcgtatggctcctacacctgccagtgcttctctggc
tttagccttctaatgacgcagaacaagaagacatgtcaagatattaatgagtgtgccatt
cccaacaaatgtcccaatggtgtctgcgtcaatactgagggatccttcacttgtgaatgc
aagaacggcttcaccaagaactggagaggacagtgtgaagatgtggatgagtgcaggagc
ccaagtgtctgccctggtggcatatgtgtgaatacccagggctctttccagtgccaagcg
tgcggccctggcttcaaacctgctggtgggagatgtctggacattaacgagtgtcaggca
gctggcatgtgtgccaatggtcggtgtgtgaacacagagggctccttcatttgtacctgc
aaccatggctaccaaacaactgcacgcaacaacagctgccaagatgtgaacgagtgcctg
ctcccagatgcgtgtcctcacggcacgtgtgttaatctcccgggttcccacaggtgcagg
tgttacacaggataccaatccagccctgatggcaaaggctgtgaggatgtggatgaatgt
gctcatcacagcctgtgtgtggaaggtgtatgtgttaacaccgctggctcgttcacctgt
acgcagtgtgaggttggatacagactgtctgaggacagacagaggtgtgaggatgttgat
gagtgtctgatactgtccatgtgccgtaacggcatctgcctgaactcggagggctcattc
tcctgtgtggactgccccacaggctacagagtctcaggagatggagagcgatgtgatgat
atagatgagtgtgcttcaccctctacctgccctcaggggaagtgcattaacagtgagggc
tcttacacctgcattatatgtggtcctggatacagaatagcagctaatggaagctgtgaa
gatattgatgaatgtcagtctcctgaagtgtgtccacagtctggctgtaccaacactgag
gggtcttactcctgtatgaactgtgaccctggctacaggctctcgtcagaccgccacaca
tgtgaagatgtcaatgaatgtgaggacatggcagtgtgtcctaatggacactgtataaac
acagcaggttccttccattgtgactgccctgtaggctttgagctaatggacacagactgc
agagatgtggacgagtgtgctgtagcagagatgtgctctaacggacagtgtctgaacaca
gatggctcctaccagtgtctgtgtgactcaggctacaggttctctacagactcgaaagag
tgtgaggatctggatgaatgtaaggagtacagtggtgtgtgtgggacatggaactgtgag
aacacactgggatcataccgctgcttcatgggctgtcagtcaggcttctatggggaagac
aacaaggactgtgatattgatgagtgtgaagacgagaatatctgcggcaagaatggctac
tgtgagaacacggacgggtcttaccgctgtcagtgtgaccgaggatacaccaaccctcct
gaaggccaaggctgcattgatgtaaatgagtgtgagacgagtagtgacctgtgtggagag
gcactgtgtgagaatgcagagggaagcttcctgtgcatctgccccaatgagaatgaggaa
ttcgaccctgttgctagccagtgcagcctccgccatgttgagataccagttgtacgagaa
cctgagcgcccagctcctcccccagctgcttctgatgagggacagaggaaggagtgctac
tacaacctgaatgacgcgaacctgtgtgagaacgtgctctcccataacgcaacgaagcag
gagtgctgctgtactgtgggggcaggctggggggacaactgtgagatccatccctgccca
gtcaaaggacaagcggagtatgactggctctgtccacgtggttccggtcttctctcagtt
gtctcctcagtgcaagggtatagtcatctccaggtcacagatgtagatgagtgcgagatg
tttggcccagaaatttgtaaaaatggtatttgctcaaactactactcaacattttcctgc
ttctgtcgcaatggctattactacgataacatccgcatggcttgtgttgatcatgatgaa
tgtaaggaggagaacctgtgtgagcatggaaaatgtgtaaacacagacggctccttcaac
tgcttctgtagtcctccactggtgctggatggcacacagcgaaactgcatctccatcaac
aacacagacggtgttcatgaaggtctagatgaagatgttcacacagatatctgctggcag
caggtgaaacaggaaatatgttctgaccccatggtgggctttccgaccacctacacggag
tgctgctgtctgtatggtgttgcctggggttcacaatgtgccttttgccccaagaaaaca
tctgagcactttgcagtgctgtgtaacctgcctcacagaggcacagacagtctgcgggaa
agaccaagctttgagtatggaccctatgaaccaccttactgggataactacggccctttg
gaaggtgacccctactatagccctgaaggtcctgcaaatgtcccccctgattcagcaatt
gattatagctctagagagatggtacgagtgccattacacagacccagagtgaaccagccg
cctcgcagagtggatccgtacagaggtcgtaatgaaggctttgagggtttacgggcagaa
gagtgcggcatcttaaacgggtgtgaaaatggccgctgtgttcgcgtgagagagggctac
acctgcgactgctttgatggctatgaacttgacctaagcaagatggcatgcattgatata
aatgaatgtaaggacatcagtgacagcgtggagctgtgcaagaatggcatatgttccaac
acagagggatcatacaagtgcacctgcctgccaggattcgtggcctcctccaagccccac
gagtgtatcccagaggtccaaccgccagccccccacgcagaggggaagtga
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