Astyanax mexicanus (Mexican tetra): 103024279
Help
Entry
103024279 CDS
T05042
Symbol
capn8
Name
(RefSeq) calpain-8
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04141
Protein processing in endoplasmic reticulum
amex04210
Apoptosis
amex04217
Necroptosis
amex04218
Cellular senescence
amex04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103024279 (capn8)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103024279 (capn8)
04217 Necroptosis
103024279 (capn8)
04218 Cellular senescence
103024279 (capn8)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103024279 (capn8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103024279 (capn8)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
103024279 (capn8)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C2: calpain family
103024279 (capn8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
103024279
NCBI-ProteinID:
XP_007236094
Ensembl:
ENSAMXG00000013776
UniProt:
A0A8B9KWS6
LinkDB
All DBs
Position
23:complement(21559887..21586009)
Genome browser
AA seq
700 aa
AA seq
DB search
MSSIANELAKRQDKKEGLGSNDNAIPFNNQDYLSLRRECLQRKTLFCDPTFPADSSSLGY
NQLGRYSSKTAGVVWKRPTELCSNPEFISNGATRMDIRQGALGDCWLLAAIASLTLDTDI
LARVVPPAQSFKEDYAGIFHFQLWQYGEWIDVVIDDRLPTKNGELLFVHSEEGSEFWSAL
LEKAYAKLNSSYEALSGGSTTEGFVDFTGGIAESYELRKAPPTLFNIIKKALSRGSMLGC
SIDIANSYESEAMTRQKLVKGHAYSLTAAVEVHVSGRPVQLVRLRNPWGQVEWTGAWSDD
SKEWDRVLPEEKAKLDYSADDGEFWMEYSDFLNQYSKIEICNLTPDTLSSEGVCRWSCYQ
FEGSWKVGSTAGGCRNNPATFCSNPQFVIKLEEVDDDPHDGVDGCSFLVGLMQRDGRKER
QFGRDLNTVGFAIYMVPDEFRGQNNIHLGPDVLLRQRAIAMSDTFINLREVCSRFKLPPG
EYVIIPSTFEPHRKGNFILRVFAEKHAEAGHMESEIRADIKEVDISEKDVDPHFKHLFKQ
IAGNDSEISAAELQKILDRIVSERTDLKTDGFSLETCRHIISLLDKDGNGTLGLMEFHTL
WVKLQKYLEIFKNRDLDNSGTISSHEIREALSEAGFQMNTSVLQVIIARYADQESAIDFD
CFVGCLIRIEMLFQMFKKFDKNNTGKIELDIMQWFCLTLS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcattgctaatgaactggccaagaggcaggataaaaaggaaggtttgggcagc
aacgataatgccattcccttcaacaaccaggactacctgagtctgcggcgagagtgccta
cagcgcaagaccctcttctgcgaccccaccttccctgcagactcatcatccctcggctac
aaccaactgggccgctactcctccaagactgcgggggtggtgtggaaaagacccacggaa
ctgtgctcaaaccctgagttcatctccaatggagctaccaggatggacatccgtcaggga
gctttaggtgactgctggctactggcagcaatcgcttctctgactctggacacagatatt
ttagctcgcgtggttccgcctgcgcagagttttaaagaggactacgccggaatcttccac
tttcagttgtggcagtatggcgagtggatcgacgttgtcattgatgaccggttacctacc
aaaaatggggagctgctgtttgtccactctgaggaagggagcgagttctggagcgccctg
ctggagaaggcctatgctaagttgaacagctcctatgaggctctgtctggaggttccacc
accgagggctttgtggacttcactggtggcatcgctgagagttatgagttgaggaaagct
ccgccaaccctcttcaacatcattaaaaaagcactgagccggggctccatgctgggctgc
tccatagatatcgccaactcttacgaaagtgaagccatgaccagacagaagctggtgaag
ggacacgcctactccctcacagcagcagtagaggtccatgtttccggaagaccagttcag
ctggttcggctcaggaacccgtgggggcaggtggagtggaccggtgcctggagtgatgac
tccaaagagtgggaccgggtgctgccagaggaaaaggccaaactggattactctgctgat
gatggagagttctggatggagtattctgattttcttaatcagtactccaagatagagatc
tgtaacctgactccggacactctgagcagcgagggggtgtgccgctggagttgttaccag
tttgagggctcctggaaagtgggctcgacagctggtggctgcaggaataacccagcaaca
ttctgctcgaaccctcagtttgtaataaagctggaggaagttgatgatgaccctcatgat
ggagtagacggctgttccttcctggttggactgatgcagagagacgggcgtaaggaaagg
cagtttggacgggacctcaacaccgttggatttgcaatctacatggttccagacgagttt
cgaggtcaaaacaacattcacctaggccctgatgtgttgctgcgtcagagagctatcgcc
atgagcgacaccttcataaacctgcgtgaggtgtgctcccgcttcaaactgccccctggg
gaatacgtcattatcccctccaccttcgagccgcatcgcaagggcaacttcatcctgcgt
gtgtttgctgagaagcatgctgaagctggccatatggagtcagagatccgtgcagatatt
aaagaggtggatatctctgagaaagatgtggacccacacttcaagcacctcttcaagcag
attgctgggaatgattctgaaatttcagcagccgagcttcagaagattctggacagaatt
gtgtctgagcgaaccgacctgaagacagatggcttcagtttggagacttgccgccacatc
atcagcctgctggataaagatggcaatggaacactcgggttaatggagtttcatactctc
tgggtgaagctgcagaaatacctggagatctttaagaaccgtgatctagacaactctgga
accatcagctcccatgagatcagagaagctctgagtgaagcaggcttccagatgaacacc
tcagtgctgcaggtgattatcgcacgctatgctgaccaggagagtgccattgacttcgac
tgctttgtgggctgcctgatccgtatagagatgctcttccaaatgttcaagaagtttgac
aagaacaacacagggaagattgagctggatattatgcagtggttctgcttgacactgagc
tga
DBGET
integrated database retrieval system