Astyanax mexicanus (Mexican tetra): 103024332
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Entry
103024332 CDS
T05042
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103024332 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103024332 (dysf)
Membrane trafficking [BR:
amex04131
]
Endosome - Lysosome transport
Others
Ferlins
103024332 (dysf)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103024332 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerA
FerI
CEP76-C2
PTEN_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
103024332
NCBI-ProteinID:
XP_049338122
Ensembl:
ENSAMXG00000011598
LinkDB
All DBs
Position
8:complement(25074820..25227515)
Genome browser
AA seq
2090 aa
AA seq
DB search
MLRCVLQRATHLRNVEKGERHSDPLASITFRGSKKKTKVIKNNVNPVWNEGFEWDLKGIP
LDSTAEIHVVVKDHEKMGRNRFLGECRVSLRDVLNSPNFAATFTVSLVDTKKNNTGATVT
LQVSYIPPPGMAPIFQPPPQPEPQHSSTPIELDTVTVFSLDTMGEEDTESMMTIEVAEEP
EPVPGPQGPETGIPTAPPKKAPPAFNQGLKKKQQQQQQHNKAPLPNKPQDLQVRVRIIEG
RQLPGVNIKPVVKVTVGGQTKRTRIKKGNNPFFDETFFLNFFETPADLFDEPIFITVFDS
KSLRTDSVIGEFKMDVGMVYNEHRHAILRKWLLLADPDDLSAGARGYLKASMFVLAAGDE
PPTDKKEGVQEKEDIEANLLRPAGLTLRGANFTLKVYRAEDLPQMDDAFMDGMKQFLGFD
SNRKNLVDPLVEINFAGKTMCSKILEKNANPQWNQSLTLPIRFPSMCEKMRIRILDWDRA
SHNDVIGTTHLCMSKICAPGGEIEVDDSLGFLPTFGPCFVNLYGSLREFTAFSDPHEALN
LGKGEGVAYRGRVLLELNTKLCERVEQRVEDIQPDDLLVVEKFMRKRKYSLFAAFYSATH
LQDVDDAIQFEVSIGNYGNKFDCTCLPLASTTQYSRAVFDGCHYYYLPWKNVKPVVVLSS
EWEDISPRIEALNMLLSIVDHLESNLKLVQLELQSGGDQDDLEQTVVKLLDDVIADCSEE
LPEFDNWPCVTPLDKSLRRLRKVNLKQIEQAALTLKHGPETELSSVLEQAEDWAQRLRSL
AEEPQNSLPDIVIWMLQGDRRVAYHRIPAHEVLFSQGYCGKHCGQLQTVFMKYPQGGGGC
TKIPAQLRVKVWFGLAADVKHFNQFSEGNLSVFAETYENQTKLALVGNWGTTGLTYPKFS
DVTGRISLPKESFKPSPGWSWAGDWCIQPEKTLLYDADAGHMSFVEEVFENQMRLPGGQW
IGMPEGYTDVNGEKATAKDEIECPPGWVWEDPEWSEDLKRAVDDQGWEYGITIPPDRRPK
SWVPAEKMYHTNRRRRWIRLRRRDQQKMEALRKQQHPDDSEREHWEYASLFGWKFHLKQR
KTDSFRRCRWRRRMEPLEKTGPAAIFALECSLSSVTEDKNDEKSVTTTFGVNRPTISCYF
ASGTLYHLRCYLYQARDLMAMDKDSFSDPFAIVSFLHQSQKTVTVRNNLNPTWDQTLIFY
ELEIFGDAEVTEKSPPNIVVELYDQDTYGTDEFMGRSVCQPSLVSSPRLAWYPILKNGKE
AGELLAAFQLICRDKPSIHRIPGQEGDCHIMDELVFPGLPCAFSEQRQDDTDLPCPPPLR
EPNIFMVPLNIKPVLQRTAIEILAWGLRNLKSFQLASVTSPSLQVECGGRMVQSCVIRNT
KKNPNFDINTLFIDVRLPREELYMPPLVIKVIDNRQFGRKPVVGQCTIRSLEEFRCQPES
QEAEPPNEEFDEVPQTPRDDVLIDIDDKEPLISGQDDEFMDWWSKFYASTGETKKCGSYL
EKGLDTLQVYERELEKVEGFEQLADFCHTFKLYRGRTQEEGEDPSVVGEFKGMFKIYPLP
NDPSAPCPPRQFSQLPPNGIEVCLVRVYIIQAFNLQPKDANGKCDPYVKITLGKKSVNDH
DNYIPCTLEPVFGKMFELTCSLPLEKDLKIMLYDYDMLSKDEKIGETVIDLENRFLSRYG
ARSGLPQSYCVSGVNQWRDQLKPTQLLQRLCQRRNYKLPIYKQDRVYFRGHEYTAADLDE
AKQPSPHLGPLEERLALLVLRRQGLVPEHVETRPLYSPLQPEIEQGRLQMWVDIFPKSLG
PPGPPFNITPRKAKKFFLRCIIWNTSDVILDDVSVTGERMSDIYVKGWMHGHEGNKQKTD
VHYRSLGGEGNFNWRFLFPFHYLPAEQLCTIDKKEHFWSLDKAESKIPPKITIQIWDNDK
FSFDDYLGCLEMDLNHMLRPAKSPEKCGLELLSRTQDKLVSLFEQKTVKGWWPCVCDKEG
EKILAGKVEMSLEIVSEQEQDERPAGLGRDEPNMNPHLEDPQRPETSFLWFSSPYKTLKF
IVWRRFKWLILGLILLFFILLFLGVFLYAFPNYAAMKMVGPFSGMKKGNE
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtgtgtgcttcagagagccactcacctgaggaacgtggagaaaggggagcgg
cacagcgacccgctggccagcatcaccttcagagggtcgaagaagaagaccaaagtcatc
aaaaacaatgtcaaccctgtctggaacgagggctttgaatgggacctgaaaggaataccc
ttagactcaacagcagaaatccatgtggtcgttaaggaccatgaaaaaatgggaagaaac
agatttctgggagaatgtcgtgtttctttaagagatgtgctgaactcccccaacttcgca
gccaccttcactgtgtcattagttgacaccaagaagaacaacacaggggccacagtgact
ctgcaggtttcctacatccctcctccaggcatggcaccaatctttcagcctcctccacag
cctgagccccagcacagcagcactcctatagaactggacactgtcacagtcttctctttg
gacactatgggcgaggaggacacagagagcatgatgacgattgaggttgcagaggaacct
gagcctgttcctggaccccagggtccagagactggaatccctacagctccacctaaaaaa
gcccctccagcctttaaccagggcctgaagaagaagcagcagcagcagcagcaacacaac
aaagccccgctccccaacaaaccccaggaccttcaggtacgggtgcgaatcatcgaggga
aggcagcttcctggcgtcaacataaaacctgtggtcaaggtgactgtaggggggcagaca
aagaggacacgcatcaagaaaggcaataatccattctttgatgagactttcttcttaaac
ttctttgagacgcctgcagatctctttgatgagccaatatttataacagtatttgattca
aagtcactacgcacagactctgtcattggggaattcaagatggatgttggcatggtgtat
aatgaacacagacacgctattctcaggaaatggctgttgctggcggatcccgatgacctc
tctgctggggctcgaggttacctgaaggccagcatgtttgttctggctgctggtgatgaa
ccaccgacggataagaaagagggtgttcaggagaaggaggacattgaggccaatctacta
aggccagccggacttactcttagaggagccaatttcactctcaaagtctacagagcagag
gacctacctcagatggatgatgcttttatggatggcatgaagcagtttctgggatttgac
tccaatagaaagaacctggtggatccattagtggaaatcaactttgctggcaaaacgatg
tgtagtaaaatactggagaaaaatgcaaatccacagtggaaccaaagtctgacacttcct
atcaggtttccatctatgtgtgagaagatgaggatacgcattttagattgggatcgagcc
agccacaatgatgtcattggcaccacgcacctgtgcatgtcgaagatctgtgctccagga
ggagaaatagaagttgatgacagcctgggcttcctgccaacatttggcccttgttttgtt
aacttgtatggaagtcttagagagttcactgccttctcggacccccacgaggccctcaat
ctcggcaagggagagggcgtagcatatcgaggacgtgtgctgttggagctgaacactaag
ctgtgtgaacgggtggagcagagggttgaagatattcagcctgatgacttgttggtggta
gagaaatttatgcggaagaggaaatactctttgtttgctgctttctactctgccactcat
cttcaggacgtggatgatgccattcagtttgaggtcagcatcggtaactacggcaacaag
tttgactgcacctgcctccctctggcctccaccactcagtacagcagagctgtgtttgac
ggttgtcactactattacctgccctggaaaaatgtgaagcctgtagtggttctgtcgtca
gagtgggaggatataagtccacgtatagaagccctcaacatgctgctcagcatcgtggac
cacctggagtctaacctgaagctggtgcagctggagctccaatcagggggtgaccaagac
gacctggagcagacagtggtaaagctgcttgatgatgtcattgctgactgcagtgaggag
ctgccagagtttgataactggccatgtgtgactcctctggataagtctctgaggcgtctg
cggaaggtgaatctgaagcagattgagcaggcagctctgactctgaagcacgggcccgag
acggagctgagctcagtgctggagcaggcggaggactgggcccagagactgcgctcactc
gcagaagagccccagaacagtctgccagacattgtgatctggatgcttcagggagacaga
agagtggcctaccacagaataccagctcatgaagtgctcttctctcagggctactgtggc
aaacactgtggtcagctccagaccgtcttcatgaagtatcctcagggaggcggcggctgc
actaagatcccagcacagcttcgggtgaaggtgtggtttggcctcgctgctgatgtcaag
cactttaatcagttctcagagggaaacctgtctgtgtttgctgagacgtatgagaaccag
accaagctggctctggtggggaactggggcacgacaggcctgacctacccaaagttcagt
gatgtgactggtagaataagcctgccgaaggagagtttcaaaccttctccaggctggagc
tgggctggagactggtgcatccaaccagagaaaactttgctgtatgatgcagatgcaggt
catatgagttttgtggaggaagtgtttgaaaatcagatgaggcttccgggaggacaatgg
atcggaatgccagaaggctatacggatgtgaatggagagaaagcaacagccaaagatgaa
atcgagtgtcctccaggctgggtgtgggaagatccagaatggagtgaagatctgaaacgg
gcagtagacgatcaggggtgggagtacggcattaccattcctcctgaccgtcggcccaag
tcctgggtgccagctgagaaaatgtaccacaccaatcgcagacgccgctggatccgcctg
cgccgcagagaccagcagaaaatggaagctctcagaaagcagcagcatccagatgattcg
gagcgtgaacactgggagtatgcctctctgtttggctggaagttccaccttaagcagagg
aaaacggactcgttccgccgctgccgctggcgccgccgcatggagcctctggagaagacc
ggaccggcggccatctttgccctggagtgctcgctgagcagtgtgactgaggacaaaaac
gacgagaagtccgttacaacaaccttcggtgtgaaccgccccaccatctcctgctacttt
gcgagtggtaccctgtatcatttacgctgctacctgtatcaagctagagatcttatggcc
atggataaagatagtttctcagatcccttcgccatcgtgtctttcctgcaccaaagccag
aagacagtgaccgtaaggaacaacctcaaccctacctgggatcagactctaatcttctat
gagctggagatattcggagacgctgaagtgactgagaagagtcccccaaacattgtggtg
gagctttatgatcaggacacctatgggacggatgagtttatgggacgcagtgtttgtcag
ccctccctggtttcctctcctcgcttggcctggtatcccatcctgaaaaatggaaaagaa
gcaggagaactgctggctgcttttcagctgatctgcagagataagccctcaatccatcgc
atccctggtcaagagggagattgccacatcatggatgagcttgtgtttccaggcctgcct
tgtgccttctctgagcaaaggcaagacgacactgacttgccctgccctcctcctctgaga
gagccgaacatcttcatggtgccactgaacatcaaacccgtcctacagcgcactgctatt
gagatcttggcgtggggattgcgcaacctcaagagcttccagctggccagtgtgacctcc
cccagcctgcaggtggagtgtggcggccgcatggtccaatcctgtgtgatccgcaacacc
aagaagaaccccaacttcgacatcaacacgctcttcattgatgtgcggttgcccagggag
gagctgtatatgccgcctttggtgatcaaggtgattgacaacaggcagtttggcaggaag
ccagtggtgggccagtgtaccatccgctcactggaggagttccgctgccagccagagagc
caggaggcagagcccccaaatgaggagttcgatgaggtacctcaaaccccaagagatgac
gttctcatagacatagatgacaaggagcctctcatttctggacaggacgatgagttcatg
gactggtggagcaagttctatgcctcgacgggtgagacgaaaaaatgtggaagctaccta
gaaaaaggcctggacaccctacaggtatatgagcgagagctggaaaaagtcgagggtttt
gagcagttggctgatttctgtcacacattcaagctttatcgtggaagaactcaggaagag
ggtgaagacccttcagttgttggagagtttaagggcatgtttaaaatctacccactaccc
aatgacccatctgcaccatgccctcctcgccagttcagtcagctgccacccaatggcata
gaggtgtgcctggtacgagtctatattatccaggccttcaacctgcagcccaaagatgcc
aatggaaagtgtgacccctatgtcaagattacactggggaagaagtcagtaaatgaccat
gacaactacataccctgcacactggagcctgttttcggaaaaatgtttgagctgacgtgt
tccctgcctctggagaaggacctgaagatcatgctgtatgattacgacatgctgtctaaa
gatgagaagatcggggagacggtcatcgacctggagaaccgctttctgtctcgttatggt
gctcgctctggcctgccccagtcttactgcgtgtctggagtgaaccagtggagagaccag
ctaaaacccacccagctgctccagcgcctgtgtcagaggagaaactacaagctgcccatc
tacaagcaggacagagtgtacttcaggggccatgagtacactgcagcagacttggatgag
gcaaagcagcccagtcctcaccttggaccactggaggaacggctggctctgctggtgctg
aggaggcaaggcttggtgcctgaacatgtggaaaccagacctctatacagccccctgcag
cctgagatagaacagggccggttacagatgtgggtggacatattccctaagtctttagga
ccaccaggcccacctttcaatattacaccacgcaaagcaaagaagttctttctacgctgc
atcatatggaacaccagcgatgtcattctggatgatgtcagtgtcaccggggagaggatg
agtgacatttatgtaaaaggctggatgcacggccatgagggaaacaagcagaagacagac
gtgcactatcgctcgcttggcggcgaaggcaacttcaactggaggttcctgttccccttc
cattacttacctgctgagcagctgtgtaccattgataaaaaggagcacttctggagtttg
gacaaggcagaatcgaagattcctcctaagattaccattcagatttgggacaatgacaag
ttctcgtttgatgactaccttggttgtttggaaatggatctgaaccacatgttgaggccg
gcgaagtctccggagaaatgcggtctggagctgctctctcggactcaagacaagctggtg
tctctgttcgagcagaagacagtcaagggctggtggccctgtgtgtgtgacaaagaagga
gagaagatcctcgctggaaaggtagaaatgtctctagagatcgtctcagagcaggaacag
gatgagaggcctgcaggattggggcgagacgaacccaacatgaaccctcaccttgaggat
ccacaacgccctgaaacctccttcctgtggttctcctctccatataaaacactgaagttc
attgtgtggaggagatttaagtggctcatcctgggcctcatcttactcttcttcatcctg
ctcttcctgggagtcttcctctacgccttccccaactatgctgctatgaagatggtgggt
cccttcagtggaatgaagaaggggaatgagtga
DBGET
integrated database retrieval system
